Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 MIR30D-201ENST00000362283 70 ntBASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.430-201ENST00000384081 110 ntBASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 SNORA40.8-201ENST00000411034 126 ntBASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 HAR1A.1-201ENST00000459583 118 ntBASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-635P-201ENST00000516651 102 ntBASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 MIR4282-201ENST00000583613 67 ntBASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 MIR5197-201ENST00000583721 112 ntBASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 AL365265.1-201ENST00000621045 234 ntBASIC0.31□□□□□ -2.36
NPC1L1Q9UHC9 snoU2_19.4-201ENST00000364329 80 ntBASIC0.3□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.262-201ENST00000364641 102 ntBASIC0.3□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
NPC1L1Q9UHC9 SNORA1-201ENST00000384107 130 ntBASIC0.3□□□□□ -2.36
NPC1L1Q9UHC9 MIR518A1-201ENST00000385068 85 ntBASIC0.3□□□□□ -2.36
NPC1L1Q9UHC9 SNORD93-201ENST00000408813 74 ntBASIC0.3□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-1190P-201ENST00000410811 104 ntBASIC0.3□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-453P-201ENST00000516819 85 ntBASIC0.3□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.176-201ENST00000363815 109 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 SNORA26.6-201ENST00000391256 115 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-381P-201ENST00000391259 108 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 RNU4-43P-201ENST00000410628 137 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-893P-201ENST00000458841 100 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-863P-201ENST00000515989 104 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-469P-201ENST00000516253 101 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 MIR3129-201ENST00000581095 76 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 AC006504.6-201ENST00000590142 199 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 AL365205.2-201ENST00000594586 68 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 AC008608.1-201ENST00000603910 127 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.29□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.23-201ENST00000362496 106 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-1099P-201ENST00000363533 107 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.274-201ENST00000364714 101 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.294-201ENST00000364916 102 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.515-201ENST00000384535 112 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 RNA5SP299-201ENST00000391203 116 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 RNA5SP94-201ENST00000516917 108 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 AC022523.2-201ENST00000561045 150 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 MIR5093-201ENST00000583199 100 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 MIR8062-201ENST00000621515 85 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 AC091932.4-201ENST00000623386 200 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 MIR6759-201ENST00000638110 65 ntBASIC0.28□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.352-201ENST00000365439 102 ntBASIC0.27□□□□□ -2.37
NPC1L1Q9UHC9 RNU4-83P-201ENST00000410863 133 ntBASIC0.27□□□□□ -2.37
NPC1L1Q9UHC9 AL662814.1-201ENST00000617364 121 ntBASIC0.27□□□□□ -2.37
NPC1L1Q9UHC9 MIR6086-201ENST00000638065 55 ntBASIC0.27□□□□□ -2.37
NPC1L1Q9UHC9 AL596211.1-201ENST00000569873 2277 ntBASIC0.27□□□□□ -2.37
NPC1L1Q9UHC9 RNA5SP517-201ENST00000364724 117 ntBASIC0.26□□□□□ -2.37
NPC1L1Q9UHC9 Y_RNA.461-201ENST00000384263 103 ntBASIC0.26□□□□□ -2.37
NPC1L1Q9UHC9 SNORD116-25-201ENST00000516517 92 ntBASIC0.26□□□□□ -2.37
NPC1L1Q9UHC9 Y_RNA.720-201ENST00000517166 92 ntBASIC0.26□□□□□ -2.37
NPC1L1Q9UHC9 AL442663.2-201ENST00000554385 511 ntBASIC0.26□□□□□ -2.37
NPC1L1Q9UHC9 MIR5190-201ENST00000581537 80 ntBASIC0.26□□□□□ -2.37
NPC1L1Q9UHC9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.26□□□□□ -2.37
NPC1L1Q9UHC9 RNU6-238P-201ENST00000363313 106 ntBASIC0.25□□□□□ -2.37
NPC1L1Q9UHC9 RNU6-651P-201ENST00000411040 105 ntBASIC0.25□□□□□ -2.37
NPC1L1Q9UHC9 MIR3678-201ENST00000578455 94 ntBASIC0.25□□□□□ -2.37
NPC1L1Q9UHC9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
NPC1L1Q9UHC9 Y_RNA.416-201ENST00000384014 113 ntBASIC0.24□□□□□ -2.37
NPC1L1Q9UHC9 Y_RNA.476-201ENST00000384347 108 ntBASIC0.24□□□□□ -2.37
NPC1L1Q9UHC9 Y_RNA.518-201ENST00000384552 113 ntBASIC0.24□□□□□ -2.37
NPC1L1Q9UHC9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.24□□□□□ -2.37
NPC1L1Q9UHC9 AL121914.1-201ENST00000450188 156 ntBASIC0.24□□□□□ -2.37
NPC1L1Q9UHC9 RNU6-135P-201ENST00000516769 101 ntBASIC0.24□□□□□ -2.37
NPC1L1Q9UHC9 MIR4744-201ENST00000581563 82 ntBASIC0.24□□□□□ -2.37
NPC1L1Q9UHC9 Y_RNA.574-201ENST00000384766 95 ntBASIC0.23□□□□□ -2.37
NPC1L1Q9UHC9 MIR329-2-201ENST00000385029 84 ntBASIC0.23□□□□□ -2.37
NPC1L1Q9UHC9 RNU7-45P-201ENST00000459460 63 ntBASIC0.23□□□□□ -2.37
NPC1L1Q9UHC9 AL442067.1-201ENST00000613261 223 ntBASIC0.23□□□□□ -2.37
NPC1L1Q9UHC9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.22□□□□□ -2.37
NPC1L1Q9UHC9 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
NPC1L1Q9UHC9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.22□□□□□ -2.37
NPC1L1Q9UHC9 Y_RNA.567-201ENST00000384736 106 ntBASIC0.22□□□□□ -2.37
NPC1L1Q9UHC9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.22□□□□□ -2.37
NPC1L1Q9UHC9 SEPT7P4-201ENST00000437076 306 ntBASIC0.22□□□□□ -2.37
NPC1L1Q9UHC9 RNU6-765P-201ENST00000516916 99 ntBASIC0.22□□□□□ -2.37
NPC1L1Q9UHC9 AC021613.1-201ENST00000623880 111 ntBASIC0.22□□□□□ -2.37
NPC1L1Q9UHC9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.22□□□□□ -2.37
NPC1L1Q9UHC9 SNORA22.1-201ENST00000362701 134 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 SNORD44.1-201ENST00000363202 61 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 Y_RNA.483-201ENST00000384380 101 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 Y_RNA.512-201ENST00000384518 102 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 MIR548H3-201ENST00000408771 118 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 RNU5E-9P-201ENST00000411164 104 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 AL512326.2-201ENST00000426359 151 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 MIR378D2-201ENST00000580636 98 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 MIR376A2-201ENST00000636782 80 ntBASIC0.21□□□□□ -2.38
NPC1L1Q9UHC9 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
NPC1L1Q9UHC9 RNU6-403P-201ENST00000363163 104 ntBASIC0.2□□□□□ -2.38
NPC1L1Q9UHC9 RNU6-1160P-201ENST00000384546 104 ntBASIC0.2□□□□□ -2.38
NPC1L1Q9UHC9 MT-TW-201ENST00000387382 68 ntBASIC0.2□□□□□ -2.38
NPC1L1Q9UHC9 RNU6-561P-201ENST00000516222 102 ntBASIC0.2□□□□□ -2.38
NPC1L1Q9UHC9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.2□□□□□ -2.38
NPC1L1Q9UHC9 AC141846.1-201ENST00000568348 142 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms