Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PRELID3BP2-201ENST00000605362 201 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 AC103810.7-201ENST00000607821 91 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 IGLL4P-201ENST00000614590 133 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 MIR6817-201ENST00000615588 66 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SSU72Q9NP77 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SSU72Q9NP77 RNU6-497P-201ENST00000365316 104 ntBASIC2.16□□□□□ -2.06
SSU72Q9NP77 RNU6-1237P-201ENST00000384777 107 ntBASIC2.16□□□□□ -2.06
SSU72Q9NP77 MIR513A1-201ENST00000385138 129 ntBASIC2.16□□□□□ -2.06
SSU72Q9NP77 RNU6-638P-201ENST00000516582 104 ntBASIC2.16□□□□□ -2.06
SSU72Q9NP77 SNORA77B-201ENST00000578179 125 ntBASIC2.16□□□□□ -2.06
SSU72Q9NP77 AC020891.4-201ENST00000605745 93 ntBASIC2.16□□□□□ -2.06
SSU72Q9NP77 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.16□□□□□ -2.06
SSU72Q9NP77 AP000648.3-201ENST00000623539 4507 ntBASIC2.15□□□□□ -2.06
SSU72Q9NP77 RNU6-979P-201ENST00000383896 107 ntBASIC2.15□□□□□ -2.07
SSU72Q9NP77 SNORD116-22-201ENST00000384430 92 ntBASIC2.15□□□□□ -2.07
SSU72Q9NP77 SNORD38B-201ENST00000384690 67 ntBASIC2.15□□□□□ -2.07
SSU72Q9NP77 RNA5SP148-201ENST00000516527 94 ntBASIC2.15□□□□□ -2.07
SSU72Q9NP77 MIR3935-201ENST00000583472 104 ntBASIC2.15□□□□□ -2.07
SSU72Q9NP77 AL096861.1-201ENST00000610899 123 ntBASIC2.15□□□□□ -2.07
SSU72Q9NP77 MIR7106-201ENST00000612419 65 ntBASIC2.15□□□□□ -2.07
SSU72Q9NP77 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
SSU72Q9NP77 SNORD38B-202ENST00000625943 69 ntBASIC2.15□□□□□ -2.07
SSU72Q9NP77 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SSU72Q9NP77 RNU6-1244P-201ENST00000363614 108 ntBASIC2.14□□□□□ -2.07
SSU72Q9NP77 RNA5SP259-201ENST00000365541 109 ntBASIC2.14□□□□□ -2.07
SSU72Q9NP77 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SSU72Q9NP77 RNA5SP212-201ENST00000391223 107 ntBASIC2.14□□□□□ -2.07
SSU72Q9NP77 Y_RNA.620-201ENST00000411009 88 ntBASIC2.14□□□□□ -2.07
SSU72Q9NP77 RPL39P39-201ENST00000455840 151 ntBASIC2.14□□□□□ -2.07
SSU72Q9NP77 RNU6-322P-201ENST00000516010 103 ntBASIC2.14□□□□□ -2.07
SSU72Q9NP77 AC141846.1-201ENST00000568348 142 ntBASIC2.14□□□□□ -2.07
SSU72Q9NP77 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
SSU72Q9NP77 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SSU72Q9NP77 SNORD116-10-201ENST00000363791 102 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 SNORA67.1-201ENST00000364749 141 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 MIR196B-201ENST00000384852 84 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 MIR548G-201ENST00000408442 89 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 RNA5SP184-201ENST00000411071 108 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 RPS29P28-201ENST00000446439 141 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 RNU6-922P-201ENST00000516753 99 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 AC121758.2-201ENST00000553271 193 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 MIR4319-201ENST00000577285 85 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 AC015688.6-201ENST00000577737 104 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 MIR4668-201ENST00000582284 70 ntBASIC2.13□□□□□ -2.07
SSU72Q9NP77 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.13□□□□□ -2.07
SSU72Q9NP77 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SSU72Q9NP77 Y_RNA.173-201ENST00000363776 113 ntBASIC2.12□□□□□ -2.07
SSU72Q9NP77 RNU6-1124P-201ENST00000384169 107 ntBASIC2.12□□□□□ -2.07
SSU72Q9NP77 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
SSU72Q9NP77 RNU7-48P-201ENST00000458875 63 ntBASIC2.12□□□□□ -2.07
SSU72Q9NP77 SNORD111.1-201ENST00000516421 86 ntBASIC2.12□□□□□ -2.07
SSU72Q9NP77 MIR5588-201ENST00000581890 63 ntBASIC2.12□□□□□ -2.07
SSU72Q9NP77 AL773524.1-201ENST00000614065 229 ntBASIC2.12□□□□□ -2.07
SSU72Q9NP77 AC006386.2-201ENST00000624491 75 ntBASIC2.12□□□□□ -2.07
SSU72Q9NP77 AC012005.1-201ENST00000624575 75 ntBASIC2.12□□□□□ -2.07
SSU72Q9NP77 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-865P-201ENST00000364772 107 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-1276P-201ENST00000365372 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 Y_RNA.567-201ENST00000384736 106 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 MIR524-201ENST00000385242 87 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-447P-201ENST00000410293 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-1118P-201ENST00000410382 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-1076P-201ENST00000410397 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-613P-201ENST00000410412 108 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-355P-201ENST00000410427 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-791P-201ENST00000410467 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-705P-201ENST00000410601 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-1100P-201ENST00000410691 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-860P-201ENST00000410860 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNA5SP225-201ENST00000410874 135 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-1217P-201ENST00000411276 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-785P-201ENST00000411324 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNU6-250P-201ENST00000516958 103 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 U6.90-201ENST00000614007 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 AL662814.1-201ENST00000617364 121 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 U6.70-201ENST00000620287 104 ntBASIC2.11□□□□□ -2.07
SSU72Q9NP77 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SSU72Q9NP77 RNY1P4-201ENST00000384595 115 ntBASIC2.1□□□□□ -2.07
SSU72Q9NP77 RNU1-98P-201ENST00000458992 160 ntBASIC2.1□□□□□ -2.07
SSU72Q9NP77 snoU13.2-201ENST00000459201 104 ntBASIC2.1□□□□□ -2.07
SSU72Q9NP77 EIF4BP1-201ENST00000554881 351 ntBASIC2.1□□□□□ -2.07
SSU72Q9NP77 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SSU72Q9NP77 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SSU72Q9NP77 Y_RNA.98-201ENST00000363109 102 ntBASIC2.09□□□□□ -2.07
SSU72Q9NP77 SNORA5B-201ENST00000363786 132 ntBASIC2.09□□□□□ -2.07
SSU72Q9NP77 MIR563-201ENST00000385080 79 ntBASIC2.09□□□□□ -2.07
SSU72Q9NP77 SUMO2P12-201ENST00000405924 140 ntBASIC2.09□□□□□ -2.07
SSU72Q9NP77 MIR1255A-201ENST00000408338 113 ntBASIC2.09□□□□□ -2.07
SSU72Q9NP77 AC108938.1-201ENST00000451204 136 ntBASIC2.09□□□□□ -2.07
SSU72Q9NP77 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.09□□□□□ -2.07
SSU72Q9NP77 AP003716.2-201ENST00000528260 108 ntBASIC2.09□□□□□ -2.07
SSU72Q9NP77 AL033523.1-201ENST00000605153 153 ntBASIC2.09□□□□□ -2.07
SSU72Q9NP77 RNU6-90P-201ENST00000606352 106 ntBASIC2.09□□□□□ -2.07
SSU72Q9NP77 ZNF658B-202ENST00000615961 3375 ntBASIC2.09□□□□□ -2.08
SSU72Q9NP77 SNORA25.3-201ENST00000363205 127 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms