Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 MIR4514-201ENST00000581410 57 ntBASIC0.12□□□□□ -2.39
POLR1EQ9GZS1 AL442067.1-201ENST00000613261 223 ntBASIC0.12□□□□□ -2.39
POLR1EQ9GZS1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.12□□□□□ -2.39
POLR1EQ9GZS1 MIR6841-201ENST00000637129 72 ntBASIC0.12□□□□□ -2.39
POLR1EQ9GZS1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.11□□□□□ -2.39
POLR1EQ9GZS1 Y_RNA.176-201ENST00000363815 109 ntBASIC0.11□□□□□ -2.39
POLR1EQ9GZS1 RNU6-1292P-201ENST00000383856 107 ntBASIC0.11□□□□□ -2.39
POLR1EQ9GZS1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
POLR1EQ9GZS1 Y_RNA.590-201ENST00000410140 107 ntBASIC0.11□□□□□ -2.39
POLR1EQ9GZS1 AL512326.2-201ENST00000426359 151 ntBASIC0.11□□□□□ -2.39
POLR1EQ9GZS1 AC073261.1-201ENST00000429409 121 ntBASIC0.11□□□□□ -2.39
POLR1EQ9GZS1 SEPT7P4-201ENST00000437076 306 ntBASIC0.11□□□□□ -2.39
POLR1EQ9GZS1 SNORA31.14-201ENST00000516728 116 ntBASIC0.11□□□□□ -2.39
POLR1EQ9GZS1 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
POLR1EQ9GZS1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.1□□□□□ -2.39
POLR1EQ9GZS1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.1□□□□□ -2.39
POLR1EQ9GZS1 MT-TW-201ENST00000387382 68 ntBASIC0.1□□□□□ -2.39
POLR1EQ9GZS1 Y_RNA.679-201ENST00000516416 91 ntBASIC0.1□□□□□ -2.39
POLR1EQ9GZS1 MIR1273G-201ENST00000577677 100 ntBASIC0.1□□□□□ -2.39
POLR1EQ9GZS1 MIR3152-201ENST00000579801 74 ntBASIC0.1□□□□□ -2.39
POLR1EQ9GZS1 AL365205.2-201ENST00000594586 68 ntBASIC0.1□□□□□ -2.39
POLR1EQ9GZS1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.1□□□□□ -2.39
POLR1EQ9GZS1 AC021613.1-201ENST00000623880 111 ntBASIC0.1□□□□□ -2.39
POLR1EQ9GZS1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 MIR335-201ENST00000362173 94 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 SNORA22.1-201ENST00000362701 134 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 RNU6-639P-201ENST00000384074 107 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 Y_RNA.483-201ENST00000384380 101 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 AC069271.1-201ENST00000445577 156 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 RNU6-469P-201ENST00000516253 101 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 Y_RNA.701-201ENST00000516812 110 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 RNA5SP268-201ENST00000516828 124 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 AC112693.2-201ENST00000556538 232 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 MIR4643-201ENST00000577473 78 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.09□□□□□ -2.4
POLR1EQ9GZS1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 RNU4-67P-201ENST00000364569 141 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 RNU6-728P-201ENST00000365375 104 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 RNU2-59P-201ENST00000410482 191 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 RNU4-43P-201ENST00000410628 137 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 MTATP8P1-201ENST00000467115 207 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 AC023932.2-201ENST00000603176 175 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 MIR7107-201ENST00000611489 80 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
POLR1EQ9GZS1 RNU4-17P-201ENST00000365598 141 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 RNU6-949P-201ENST00000384040 107 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 SNORA18-201ENST00000384416 132 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 SNORA72.6-201ENST00000384520 129 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 SNORA20-201ENST00000384662 132 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 RNU6-713P-201ENST00000384761 107 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 SNORA79-201ENST00000408376 140 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 SUMO1P3-201ENST00000439961 304 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 SCARNA15-202ENST00000516881 127 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 RNU6-765P-201ENST00000516916 99 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 MTND5P34-201ENST00000568888 325 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 AC011921.3-201ENST00000605540 361 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 MIR6755-201ENST00000619993 66 ntBASIC0.07□□□□□ -2.4
POLR1EQ9GZS1 MIR330-201ENST00000362196 94 ntBASIC0.06□□□□□ -2.4
POLR1EQ9GZS1 RNU6-978P-201ENST00000364371 103 ntBASIC0.06□□□□□ -2.4
POLR1EQ9GZS1 RNU6-291P-201ENST00000384720 107 ntBASIC0.06□□□□□ -2.4
POLR1EQ9GZS1 RNU6-635P-201ENST00000516651 102 ntBASIC0.06□□□□□ -2.4
POLR1EQ9GZS1 SNORA25.16-201ENST00000516741 121 ntBASIC0.06□□□□□ -2.4
POLR1EQ9GZS1 RNU6-1153P-201ENST00000516760 105 ntBASIC0.06□□□□□ -2.4
POLR1EQ9GZS1 RNU6-1258P-201ENST00000516911 111 ntBASIC0.06□□□□□ -2.4
POLR1EQ9GZS1 MIR6828-201ENST00000636181 60 ntBASIC0.06□□□□□ -2.4
POLR1EQ9GZS1 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
POLR1EQ9GZS1 Y_RNA.76-201ENST00000362931 109 ntBASIC0.05□□□□□ -2.4
POLR1EQ9GZS1 RNU6-238P-201ENST00000363313 106 ntBASIC0.05□□□□□ -2.4
POLR1EQ9GZS1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.05□□□□□ -2.4
POLR1EQ9GZS1 RNU4-16P-201ENST00000364737 141 ntBASIC0.05□□□□□ -2.4
POLR1EQ9GZS1 RNY1P13-201ENST00000365030 105 ntBASIC0.05□□□□□ -2.4
POLR1EQ9GZS1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.05□□□□□ -2.4
POLR1EQ9GZS1 Y_RNA.539-201ENST00000384635 107 ntBASIC0.05□□□□□ -2.4
POLR1EQ9GZS1 MIR6718-201ENST00000616153 80 ntBASIC0.05□□□□□ -2.4
POLR1EQ9GZS1 MIR8062-201ENST00000621515 85 ntBASIC0.05□□□□□ -2.4
POLR1EQ9GZS1 RNU6-797P-201ENST00000363101 109 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 SNORD114-26-201ENST00000363543 72 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 Y_RNA.262-201ENST00000364641 102 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 RNU6-187P-201ENST00000384139 106 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 Y_RNA.461-201ENST00000384263 103 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 AL121914.1-201ENST00000450188 156 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 RNY3P16-201ENST00000516338 101 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 RNU7-70P-201ENST00000516941 66 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 RNA5SP47-201ENST00000517230 109 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 MIR7111-201ENST00000619751 72 ntBASIC0.04□□□□□ -2.4
POLR1EQ9GZS1 MTND5P32-201ENST00000560711 1802 ntBASIC0.03□□□□□ -2.4
POLR1EQ9GZS1 Y_RNA.85-201ENST00000363014 111 ntBASIC0.03□□□□□ -2.4
POLR1EQ9GZS1 RNU6-103P-201ENST00000363686 107 ntBASIC0.03□□□□□ -2.4
POLR1EQ9GZS1 RNU6-472P-201ENST00000384299 107 ntBASIC0.03□□□□□ -2.4
POLR1EQ9GZS1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.03□□□□□ -2.4
POLR1EQ9GZS1 SNORD28-201ENST00000384706 75 ntBASIC0.03□□□□□ -2.4
POLR1EQ9GZS1 RNU6-535P-201ENST00000384722 107 ntBASIC0.03□□□□□ -2.4
POLR1EQ9GZS1 RNA5SP63-201ENST00000391225 112 ntBASIC0.03□□□□□ -2.4
POLR1EQ9GZS1 MIR1302-6-201ENST00000408466 90 ntBASIC0.03□□□□□ -2.4
POLR1EQ9GZS1 RNA5SP227-201ENST00000516184 113 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 268.2 ms