Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RPL30P7-201ENST00000479312 323 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 SNORD33.1-201ENST00000516213 88 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 MTND5P34-201ENST00000568888 325 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 MIR4422-201ENST00000581938 83 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 SNORA22.1-201ENST00000362701 134 ntBASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 SNORD20-201ENST00000384550 80 ntBASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-1104P-201ENST00000384723 104 ntBASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-1258P-201ENST00000516911 111 ntBASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 MIR6841-201ENST00000637129 72 ntBASIC1.51□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.171-201ENST00000363760 102 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 SNORD38B-201ENST00000384690 67 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 MIR548A1-201ENST00000385041 97 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 RNU7-113P-201ENST00000459273 62 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 AL512310.8-201ENST00000550183 120 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 MIR6734-201ENST00000621166 68 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 SNORD38B-202ENST00000625943 69 ntBASIC1.5□□□□□ -2.17
AMBRA1Q9C0C7 SNORD115-2-201ENST00000362842 82 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 RNY4P6-201ENST00000363667 96 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.213-201ENST00000364178 111 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-1325P-201ENST00000364905 105 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 SNORD115-20-201ENST00000365099 82 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-602P-201ENST00000411155 105 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 snoU13.25-201ENST00000458945 104 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 RNA5SP220-201ENST00000516298 104 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 CYP3A52P-201ENST00000563326 91 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 MIR6504-201ENST00000613520 61 ntBASIC1.49□□□□□ -2.17
AMBRA1Q9C0C7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 SNORA25.3-201ENST00000363205 127 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 MT-TI-201ENST00000387365 69 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 AC113410.1-201ENST00000505029 247 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-902P-201ENST00000517212 91 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 AC022523.2-201ENST00000561045 150 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 MIR4285-201ENST00000581001 85 ntBASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.299-201ENST00000364973 94 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-215P-201ENST00000365169 102 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 SNORD116-21-201ENST00000384507 92 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-429P-201ENST00000384582 108 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 AC090844.1-201ENST00000422019 156 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 AP003716.2-201ENST00000528260 108 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 MIR6129-201ENST00000616087 109 ntBASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-396P-201ENST00000365369 105 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 MIR1302-7-201ENST00000408841 72 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 AC245047.7-201ENST00000440265 293 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 RNA5SP33-201ENST00000516687 98 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-165P-201ENST00000517170 99 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 AC007012.1-201ENST00000567192 175 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 SNORA4-201ENST00000584302 138 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
AMBRA1Q9C0C7 RNA5SP264-201ENST00000363115 107 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 Y_RNA.470-201ENST00000384307 117 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 RNU4-69P-201ENST00000410677 143 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 AC244023.1-201ENST00000426884 112 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-919P-201ENST00000516731 104 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 RNU7-6P-201ENST00000516845 62 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 RNU11-2P-201ENST00000516898 142 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 MIR3163-201ENST00000581592 73 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 AC242498.1-201ENST00000604134 111 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 MIR8065-201ENST00000620577 100 ntBASIC1.45□□□□□ -2.18
AMBRA1Q9C0C7 Y_RNA.35-201ENST00000362601 101 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-392P-201ENST00000364926 101 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RNU7-95P-201ENST00000459222 64 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RPS23P4-201ENST00000487908 423 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RNA5SP480-201ENST00000516840 109 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RN7SKP88-201ENST00000516847 250 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 7SK.8-201ENST00000612110 250 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 7SK.11-201ENST00000615477 250 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 7SK.13-201ENST00000622040 250 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 AL391516.1-201ENST00000554380 2449 ntBASIC1.44□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
AMBRA1Q9C0C7 MIR1276-201ENST00000408707 83 ntBASIC1.43□□□□□ -2.18
AMBRA1Q9C0C7 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
AMBRA1Q9C0C7 MIR4679-2-201ENST00000578358 77 ntBASIC1.43□□□□□ -2.18
AMBRA1Q9C0C7 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
AMBRA1Q9C0C7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
AMBRA1Q9C0C7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
AMBRA1Q9C0C7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
AMBRA1Q9C0C7 MIR103A2-201ENST00000362154 78 ntBASIC1.42□□□□□ -2.18
AMBRA1Q9C0C7 RNU6-880P-201ENST00000384526 107 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms