Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SNORD115-35-201ENST00000365122 82 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 RNU6-905P-201ENST00000384434 107 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 RNU6-831P-201ENST00000384548 107 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 RNU7-80P-201ENST00000459562 61 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 AC019235.1-201ENST00000503847 207 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 RNU6-365P-201ENST00000517113 106 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 AC100767.1-201ENST00000528178 123 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 MIR4441-201ENST00000582623 100 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 AC073114.1-201ENST00000612027 490 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 AC069503.3-201ENST00000618674 145 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 TPTEP1-208ENST00000636884 213 ntBASIC-1.04□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 RNU6-483P-201ENST00000384088 108 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 MIR626-201ENST00000385032 94 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 SNORA49-201ENST00000386157 136 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 RNU6-373P-201ENST00000411247 98 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 RNU7-55P-201ENST00000459426 62 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 MTND3P3-201ENST00000505004 126 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.05□□□□□ -2.58
LIMD2Q9BT23 MIR342-201ENST00000362212 99 ntBASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 SNORA22.1-201ENST00000362701 134 ntBASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 RNU6-956P-201ENST00000458868 103 ntBASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 RNU7-79P-201ENST00000516082 62 ntBASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 RNU6-307P-201ENST00000516743 106 ntBASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 AL049861.1-201ENST00000603130 150 ntBASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 RN7SKP299-201ENST00000606679 301 ntBASIC-1.06□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 RNU6-99P-201ENST00000364721 107 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 MIR889-201ENST00000401280 79 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 AC093423.1-201ENST00000440817 142 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 RNA5SP272-201ENST00000516095 111 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 AC011476.5-201ENST00000615594 130 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 MTND5P26-201ENST00000426018 1752 ntBASIC-1.07□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 RNU6-429P-201ENST00000384582 108 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 SNORA20-201ENST00000384662 132 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 AC009161.1-201ENST00000417306 376 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 AC097635.1-201ENST00000450678 155 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 RNU6-893P-201ENST00000458841 100 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 RPS29P25-201ENST00000481709 171 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 RNU7-35P-201ENST00000517174 62 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 MIR4790-201ENST00000577799 79 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 MIR5591-201ENST00000578248 65 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 U6.109-201ENST00000636749 87 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 MIR198-201ENST00000637333 62 ntBASIC-1.08□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 MIR599-201ENST00000385069 95 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 RNU6-308P-201ENST00000390957 107 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 RNU2-51P-201ENST00000410708 197 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 MTCO2P24-201ENST00000515611 426 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 RNU6-479P-201ENST00000516348 105 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 RNU6-911P-201ENST00000516523 104 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 RNU6-273P-201ENST00000516937 96 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 AC144568.1-201ENST00000520139 137 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 AC098479.1-201ENST00000609225 154 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 AC091932.4-201ENST00000623386 200 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 AC021613.1-201ENST00000623880 111 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 AC090617.10-201ENST00000624308 134 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 MIR1321-201ENST00000637766 79 ntBASIC-1.09□□□□□ -2.58
LIMD2Q9BT23 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.1□□□□□ -2.59
LIMD2Q9BT23 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.1□□□□□ -2.59
LIMD2Q9BT23 MIR519A1-201ENST00000385257 85 ntBASIC-1.1□□□□□ -2.59
LIMD2Q9BT23 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.1□□□□□ -2.59
LIMD2Q9BT23 MTND3P8-201ENST00000412909 339 ntBASIC-1.1□□□□□ -2.59
LIMD2Q9BT23 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.1□□□□□ -2.59
LIMD2Q9BT23 AC021146.9-201ENST00000512503 156 ntBASIC-1.1□□□□□ -2.59
LIMD2Q9BT23 MTND5P40-201ENST00000559945 246 ntBASIC-1.1□□□□□ -2.59
LIMD2Q9BT23 PART1_1.1-201ENST00000611761 217 ntBASIC-1.1□□□□□ -2.59
LIMD2Q9BT23 AC024614.3-201ENST00000637860 256 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms