Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RN7SL863P-201ENST00000462370 296 ntBASIC3.17□□□□□ -1.9
PTCD2Q8WV60 U1.36-201ENST00000620684 176 ntBASIC3.17□□□□□ -1.9
PTCD2Q8WV60 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
PTCD2Q8WV60 AL365361.1-201ENST00000566942 3481 ntBASIC3.16□□□□□ -1.9
PTCD2Q8WV60 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.16□□□□□ -1.9
PTCD2Q8WV60 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCD2Q8WV60 RNU6-330P-201ENST00000363015 107 ntBASIC3.16□□□□□ -1.9
PTCD2Q8WV60 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
PTCD2Q8WV60 RNU6-630P-201ENST00000391258 106 ntBASIC3.16□□□□□ -1.9
PTCD2Q8WV60 SNORD63B-201ENST00000411005 70 ntBASIC3.16□□□□□ -1.9
PTCD2Q8WV60 UQCRHP3-201ENST00000451503 251 ntBASIC3.16□□□□□ -1.9
PTCD2Q8WV60 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.16□□□□□ -1.9
PTCD2Q8WV60 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCD2Q8WV60 RNU6-681P-201ENST00000364012 104 ntBASIC3.15□□□□□ -1.91
PTCD2Q8WV60 RNU6-1051P-201ENST00000365471 102 ntBASIC3.15□□□□□ -1.91
PTCD2Q8WV60 RNU6-499P-201ENST00000365615 107 ntBASIC3.15□□□□□ -1.91
PTCD2Q8WV60 RNU6-154P-201ENST00000384306 106 ntBASIC3.15□□□□□ -1.91
PTCD2Q8WV60 MIR9-2-201ENST00000384838 87 ntBASIC3.15□□□□□ -1.91
PTCD2Q8WV60 RNU6-360P-201ENST00000390944 104 ntBASIC3.15□□□□□ -1.91
PTCD2Q8WV60 RNU6-1165P-201ENST00000410119 107 ntBASIC3.15□□□□□ -1.91
PTCD2Q8WV60 RNA5SP344-201ENST00000411081 104 ntBASIC3.15□□□□□ -1.91
PTCD2Q8WV60 AC244636.1-201ENST00000421152 228 ntBASIC3.15□□□□□ -1.91
PTCD2Q8WV60 MIR6740-201ENST00000618268 113 ntBASIC3.15□□□□□ -1.91
PTCD2Q8WV60 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTCD2Q8WV60 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTCD2Q8WV60 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.14□□□□□ -1.91
PTCD2Q8WV60 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCD2Q8WV60 MIR30D-201ENST00000362283 70 ntBASIC3.14□□□□□ -1.91
PTCD2Q8WV60 Y_RNA.42-201ENST00000362660 108 ntBASIC3.14□□□□□ -1.91
PTCD2Q8WV60 RNU4-58P-201ENST00000363192 141 ntBASIC3.14□□□□□ -1.91
PTCD2Q8WV60 MIR653-201ENST00000385279 96 ntBASIC3.14□□□□□ -1.91
PTCD2Q8WV60 SNORD111.1-201ENST00000516421 86 ntBASIC3.14□□□□□ -1.91
PTCD2Q8WV60 RNU6-531P-201ENST00000516694 104 ntBASIC3.14□□□□□ -1.91
PTCD2Q8WV60 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
PTCD2Q8WV60 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PTCD2Q8WV60 Y_RNA.207-201ENST00000364142 106 ntBASIC3.13□□□□□ -1.91
PTCD2Q8WV60 Y_RNA.239-201ENST00000364444 113 ntBASIC3.13□□□□□ -1.91
PTCD2Q8WV60 SNORA54-201ENST00000384281 123 ntBASIC3.13□□□□□ -1.91
PTCD2Q8WV60 Y_RNA.500-201ENST00000384466 111 ntBASIC3.13□□□□□ -1.91
PTCD2Q8WV60 SNORD15B-201ENST00000384714 146 ntBASIC3.13□□□□□ -1.91
PTCD2Q8WV60 RNU6-291P-201ENST00000384720 107 ntBASIC3.13□□□□□ -1.91
PTCD2Q8WV60 RNA5SP274-201ENST00000410484 108 ntBASIC3.13□□□□□ -1.91
PTCD2Q8WV60 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.13□□□□□ -1.91
PTCD2Q8WV60 MIR4264-201ENST00000583520 66 ntBASIC3.13□□□□□ -1.91
PTCD2Q8WV60 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.13□□□□□ -1.91
PTCD2Q8WV60 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTCD2Q8WV60 RNU4-82P-201ENST00000362443 140 ntBASIC3.12□□□□□ -1.91
PTCD2Q8WV60 RNU6-340P-201ENST00000364005 107 ntBASIC3.12□□□□□ -1.91
PTCD2Q8WV60 HMGN2P35-201ENST00000412164 270 ntBASIC3.12□□□□□ -1.91
PTCD2Q8WV60 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.12□□□□□ -1.91
PTCD2Q8WV60 AL139132.1-201ENST00000431587 344 ntBASIC3.12□□□□□ -1.91
PTCD2Q8WV60 RNU6-1194P-201ENST00000516208 104 ntBASIC3.12□□□□□ -1.91
PTCD2Q8WV60 RNA5SP341-201ENST00000516261 117 ntBASIC3.12□□□□□ -1.91
PTCD2Q8WV60 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.12□□□□□ -1.91
PTCD2Q8WV60 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTCD2Q8WV60 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTCD2Q8WV60 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PTCD2Q8WV60 U8.9-201ENST00000365667 134 ntBASIC3.11□□□□□ -1.91
PTCD2Q8WV60 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.11□□□□□ -1.91
PTCD2Q8WV60 Z96811.1-201ENST00000445880 108 ntBASIC3.11□□□□□ -1.91
PTCD2Q8WV60 RNU7-62P-201ENST00000458856 62 ntBASIC3.11□□□□□ -1.91
PTCD2Q8WV60 AC008885.1-201ENST00000514930 301 ntBASIC3.11□□□□□ -1.91
PTCD2Q8WV60 MIR4325-201ENST00000583049 90 ntBASIC3.11□□□□□ -1.91
PTCD2Q8WV60 MIR3675-201ENST00000583661 73 ntBASIC3.11□□□□□ -1.91
PTCD2Q8WV60 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.11□□□□□ -1.91
PTCD2Q8WV60 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
PTCD2Q8WV60 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
PTCD2Q8WV60 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.1□□□□□ -1.91
PTCD2Q8WV60 MT-TF-201ENST00000387314 71 ntBASIC3.1□□□□□ -1.91
PTCD2Q8WV60 SNORD67-201ENST00000390833 111 ntBASIC3.1□□□□□ -1.91
PTCD2Q8WV60 RNU6-205P-201ENST00000390858 107 ntBASIC3.1□□□□□ -1.91
PTCD2Q8WV60 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
PTCD2Q8WV60 RN7SL75P-201ENST00000461926 281 ntBASIC3.1□□□□□ -1.91
PTCD2Q8WV60 RN7SL499P-201ENST00000481141 276 ntBASIC3.1□□□□□ -1.91
PTCD2Q8WV60 U4.3-201ENST00000621047 82 ntBASIC3.1□□□□□ -1.91
PTCD2Q8WV60 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
PTCD2Q8WV60 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCD2Q8WV60 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTCD2Q8WV60 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCD2Q8WV60 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTCD2Q8WV60 SNORA25.4-201ENST00000363666 124 ntBASIC3.09□□□□□ -1.91
PTCD2Q8WV60 RNU6-203P-201ENST00000384038 104 ntBASIC3.09□□□□□ -1.91
PTCD2Q8WV60 RPS27P16-201ENST00000425758 201 ntBASIC3.09□□□□□ -1.91
PTCD2Q8WV60 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.09□□□□□ -1.91
PTCD2Q8WV60 AC003982.1-202ENST00000469928 248 ntBASIC3.09□□□□□ -1.91
PTCD2Q8WV60 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.09□□□□□ -1.91
PTCD2Q8WV60 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.09□□□□□ -1.91
PTCD2Q8WV60 AL162274.2-201ENST00000614406 332 ntBASIC3.09□□□□□ -1.91
PTCD2Q8WV60 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.09□□□□□ -1.92
PTCD2Q8WV60 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
PTCD2Q8WV60 ZNF209P-201ENST00000593450 2304 ntBASIC3.08□□□□□ -1.92
PTCD2Q8WV60 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.08□□□□□ -1.92
PTCD2Q8WV60 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTCD2Q8WV60 MIR422A-201ENST00000362286 90 ntBASIC3.08□□□□□ -1.92
PTCD2Q8WV60 RNA5SP100-201ENST00000410903 110 ntBASIC3.08□□□□□ -1.92
PTCD2Q8WV60 RNA5SP59-201ENST00000410922 110 ntBASIC3.08□□□□□ -1.92
PTCD2Q8WV60 AC004965.1-201ENST00000413033 213 ntBASIC3.08□□□□□ -1.92
PTCD2Q8WV60 RN7SL20P-201ENST00000488827 297 ntBASIC3.08□□□□□ -1.92
PTCD2Q8WV60 SNORA25.16-201ENST00000516741 121 ntBASIC3.08□□□□□ -1.92
PTCD2Q8WV60 SNORA31.17-201ENST00000516953 127 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms