Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC073261.1-201ENST00000429409 121 ntBASIC4.03□□□□□ -1.76
TRIM41Q8WV44 SNORD67.1-201ENST00000516618 108 ntBASIC4.03□□□□□ -1.76
TRIM41Q8WV44 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM41Q8WV44 AC105081.1-201ENST00000617727 106 ntBASIC4.03□□□□□ -1.76
TRIM41Q8WV44 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
TRIM41Q8WV44 U8.9-201ENST00000365667 134 ntBASIC4.02□□□□□ -1.77
TRIM41Q8WV44 AP1B1P2-201ENST00000416196 106 ntBASIC4.02□□□□□ -1.77
TRIM41Q8WV44 MIR4709-201ENST00000577272 72 ntBASIC4.02□□□□□ -1.77
TRIM41Q8WV44 FAM106DP-201ENST00000586416 501 ntBASIC4.02□□□□□ -1.77
TRIM41Q8WV44 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM41Q8WV44 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM41Q8WV44 MIR520A-201ENST00000384862 85 ntBASIC4.01□□□□□ -1.77
TRIM41Q8WV44 RPL23AP6-201ENST00000446637 472 ntBASIC4.01□□□□□ -1.77
TRIM41Q8WV44 RNU1-98P-201ENST00000458992 160 ntBASIC4.01□□□□□ -1.77
TRIM41Q8WV44 RNVU1-2-201ENST00000516326 135 ntBASIC4.01□□□□□ -1.77
TRIM41Q8WV44 SCARNA16.3-201ENST00000516595 184 ntBASIC4.01□□□□□ -1.77
TRIM41Q8WV44 AC021506.2-201ENST00000612354 169 ntBASIC4.01□□□□□ -1.77
TRIM41Q8WV44 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM41Q8WV44 MIR548G-201ENST00000408442 89 ntBASIC4□□□□□ -1.77
TRIM41Q8WV44 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4□□□□□ -1.77
TRIM41Q8WV44 snoU13.16-201ENST00000459350 104 ntBASIC4□□□□□ -1.77
TRIM41Q8WV44 MIR4452-201ENST00000583004 71 ntBASIC4□□□□□ -1.77
TRIM41Q8WV44 RNU6-90P-201ENST00000606352 106 ntBASIC4□□□□□ -1.77
TRIM41Q8WV44 AC067747.1-201ENST00000608026 250 ntBASIC4□□□□□ -1.77
TRIM41Q8WV44 AC131280.1-202ENST00000624067 4211 ntBASIC4□□□□□ -1.77
TRIM41Q8WV44 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM41Q8WV44 Y_RNA.316-201ENST00000365118 111 ntBASIC3.99□□□□□ -1.77
TRIM41Q8WV44 Y_RNA.537-201ENST00000384626 109 ntBASIC3.99□□□□□ -1.77
TRIM41Q8WV44 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.99□□□□□ -1.77
TRIM41Q8WV44 RNU7-26P-201ENST00000458980 63 ntBASIC3.99□□□□□ -1.77
TRIM41Q8WV44 MIR21-201ENST00000362134 72 ntBASIC3.98□□□□□ -1.77
TRIM41Q8WV44 RNU6-1244P-201ENST00000363614 108 ntBASIC3.98□□□□□ -1.77
TRIM41Q8WV44 RNA5SP37-201ENST00000365420 130 ntBASIC3.98□□□□□ -1.77
TRIM41Q8WV44 AC092427.1-202ENST00000430569 476 ntBASIC3.98□□□□□ -1.77
TRIM41Q8WV44 RNU7-35P-201ENST00000517174 62 ntBASIC3.98□□□□□ -1.77
TRIM41Q8WV44 RNA5SP437-201ENST00000517249 129 ntBASIC3.98□□□□□ -1.77
TRIM41Q8WV44 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM41Q8WV44 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
TRIM41Q8WV44 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM41Q8WV44 RNA5SP138-201ENST00000365098 114 ntBASIC3.97□□□□□ -1.77
TRIM41Q8WV44 Y_RNA.354-201ENST00000365448 111 ntBASIC3.97□□□□□ -1.77
TRIM41Q8WV44 MIR660-201ENST00000385235 97 ntBASIC3.97□□□□□ -1.77
TRIM41Q8WV44 RNU7-79P-201ENST00000516082 62 ntBASIC3.97□□□□□ -1.77
TRIM41Q8WV44 MTND5P40-201ENST00000559945 246 ntBASIC3.97□□□□□ -1.77
TRIM41Q8WV44 MIR6515-201ENST00000619843 57 ntBASIC3.97□□□□□ -1.77
TRIM41Q8WV44 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM41Q8WV44 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM41Q8WV44 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM41Q8WV44 SNORD115-27-201ENST00000364430 82 ntBASIC3.96□□□□□ -1.78
TRIM41Q8WV44 RNU6-1237P-201ENST00000384777 107 ntBASIC3.96□□□□□ -1.78
TRIM41Q8WV44 RPL31P63-201ENST00000422565 375 ntBASIC3.96□□□□□ -1.78
TRIM41Q8WV44 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM41Q8WV44 AL513423.1-201ENST00000621695 132 ntBASIC3.96□□□□□ -1.78
TRIM41Q8WV44 RNU6-1321P-201ENST00000390905 107 ntBASIC3.95□□□□□ -1.78
TRIM41Q8WV44 RNU1-148P-201ENST00000384472 162 ntBASIC3.94□□□□□ -1.78
TRIM41Q8WV44 RNU4-62P-201ENST00000410125 130 ntBASIC3.94□□□□□ -1.78
TRIM41Q8WV44 snoU13.27-201ENST00000459278 104 ntBASIC3.94□□□□□ -1.78
TRIM41Q8WV44 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM41Q8WV44 SNORA31.26-201ENST00000517250 137 ntBASIC3.94□□□□□ -1.78
TRIM41Q8WV44 MIR8055-201ENST00000610739 97 ntBASIC3.94□□□□□ -1.78
TRIM41Q8WV44 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM41Q8WV44 SNORA38-201ENST00000363946 132 ntBASIC3.93□□□□□ -1.78
TRIM41Q8WV44 SNORD38.2-201ENST00000384470 69 ntBASIC3.93□□□□□ -1.78
TRIM41Q8WV44 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM41Q8WV44 MIR5007-201ENST00000583098 95 ntBASIC3.93□□□□□ -1.78
TRIM41Q8WV44 MIR8065-201ENST00000620577 100 ntBASIC3.93□□□□□ -1.78
TRIM41Q8WV44 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM41Q8WV44 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM41Q8WV44 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM41Q8WV44 RNU6-524P-201ENST00000384270 107 ntBASIC3.92□□□□□ -1.78
TRIM41Q8WV44 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.92□□□□□ -1.78
TRIM41Q8WV44 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM41Q8WV44 CYP3A52P-201ENST00000563326 91 ntBASIC3.92□□□□□ -1.78
TRIM41Q8WV44 AC012676.2-201ENST00000619258 186 ntBASIC3.92□□□□□ -1.78
TRIM41Q8WV44 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM41Q8WV44 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM41Q8WV44 MIR519C-201ENST00000385053 87 ntBASIC3.91□□□□□ -1.78
TRIM41Q8WV44 Z96811.1-201ENST00000445880 108 ntBASIC3.91□□□□□ -1.78
TRIM41Q8WV44 SNORA74.3-201ENST00000517108 154 ntBASIC3.91□□□□□ -1.78
TRIM41Q8WV44 SNORD115-37-201ENST00000363768 82 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 MIR1283-2-201ENST00000408621 87 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 AL161932.1-201ENST00000437408 146 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 RNU7-48P-201ENST00000458875 63 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 RNU7-137P-201ENST00000516788 62 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 AL513043.2-201ENST00000573941 143 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 MIR3670-2-201ENST00000582974 65 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 MIR3670-1-201ENST00000584160 65 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 MIR3670-3-201ENST00000584855 65 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 MIR3670-4-201ENST00000612260 65 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 AC010297.1-201ENST00000623948 149 ntBASIC3.9□□□□□ -1.79
TRIM41Q8WV44 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM41Q8WV44 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM41Q8WV44 Y_RNA.94-201ENST00000363068 106 ntBASIC3.89□□□□□ -1.79
TRIM41Q8WV44 MIR181B2-201ENST00000385004 89 ntBASIC3.89□□□□□ -1.79
TRIM41Q8WV44 AL023284.1-201ENST00000403956 276 ntBASIC3.89□□□□□ -1.79
TRIM41Q8WV44 RNU6-602P-201ENST00000411155 105 ntBASIC3.89□□□□□ -1.79
TRIM41Q8WV44 AC008133.2-201ENST00000624540 351 ntBASIC3.89□□□□□ -1.79
TRIM41Q8WV44 SNORD114-10-201ENST00000363409 72 ntBASIC3.88□□□□□ -1.79
TRIM41Q8WV44 AC099513.1-201ENST00000490423 301 ntBASIC3.88□□□□□ -1.79
TRIM41Q8WV44 AC022709.1-201ENST00000615967 87 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 528.5 ms