Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 Y_RNA.145-201ENST00000363527 102 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.292-201ENST00000364904 97 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 RNU6-1292P-201ENST00000383856 107 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.396-201ENST00000383949 103 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 MIR548H3-201ENST00000408771 118 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 RNU4-83P-201ENST00000410863 133 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 AC002350.1-201ENST00000490759 375 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 MIR4744-201ENST00000581563 82 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.812-201ENST00000610788 101 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.784-201ENST00000613803 101 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.787-201ENST00000616522 101 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.780-201ENST00000617336 101 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.801-201ENST00000619005 101 ntBASIC0.43□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.149-201ENST00000363558 117 ntBASIC0.42□□□□□ -2.34
PRPF39Q86UA1 RNA5SP325-201ENST00000363756 130 ntBASIC0.42□□□□□ -2.34
PRPF39Q86UA1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.459-201ENST00000384251 102 ntBASIC0.42□□□□□ -2.34
PRPF39Q86UA1 RNU6-472P-201ENST00000384299 107 ntBASIC0.42□□□□□ -2.34
PRPF39Q86UA1 RNU6-448P-201ENST00000517052 107 ntBASIC0.42□□□□□ -2.34
PRPF39Q86UA1 AL365205.2-201ENST00000594586 68 ntBASIC0.42□□□□□ -2.34
PRPF39Q86UA1 MIR924-201ENST00000638017 53 ntBASIC0.42□□□□□ -2.34
PRPF39Q86UA1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.288-201ENST00000364854 92 ntBASIC0.41□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.308-201ENST00000365043 101 ntBASIC0.41□□□□□ -2.34
PRPF39Q86UA1 MIR548F4-201ENST00000408515 105 ntBASIC0.41□□□□□ -2.34
PRPF39Q86UA1 RNU4-43P-201ENST00000410628 137 ntBASIC0.41□□□□□ -2.34
PRPF39Q86UA1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
PRPF39Q86UA1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.41□□□□□ -2.34
PRPF39Q86UA1 MIR4643-201ENST00000577473 78 ntBASIC0.41□□□□□ -2.34
PRPF39Q86UA1 AL662814.1-201ENST00000617364 121 ntBASIC0.41□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.47-201ENST00000362697 108 ntBASIC0.4□□□□□ -2.35
PRPF39Q86UA1 RNU2-38P-201ENST00000410856 79 ntBASIC0.4□□□□□ -2.35
PRPF39Q86UA1 Y_RNA.797-201ENST00000515977 94 ntBASIC0.4□□□□□ -2.35
PRPF39Q86UA1 AL117187.1-201ENST00000555482 181 ntBASIC0.4□□□□□ -2.35
PRPF39Q86UA1 MIR378D2-201ENST00000580636 98 ntBASIC0.4□□□□□ -2.35
PRPF39Q86UA1 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
PRPF39Q86UA1 Y_RNA.76-201ENST00000362931 109 ntBASIC0.39□□□□□ -2.35
PRPF39Q86UA1 RNU6-403P-201ENST00000363163 104 ntBASIC0.39□□□□□ -2.35
PRPF39Q86UA1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.39□□□□□ -2.35
PRPF39Q86UA1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.39□□□□□ -2.35
PRPF39Q86UA1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.39□□□□□ -2.35
PRPF39Q86UA1 RNU6-469P-201ENST00000516253 101 ntBASIC0.39□□□□□ -2.35
PRPF39Q86UA1 RNA5SP517-201ENST00000364724 117 ntBASIC0.38□□□□□ -2.35
PRPF39Q86UA1 RNU6-578P-201ENST00000390980 103 ntBASIC0.38□□□□□ -2.35
PRPF39Q86UA1 RNU6-493P-201ENST00000391321 108 ntBASIC0.38□□□□□ -2.35
PRPF39Q86UA1 SNORA40.8-201ENST00000411034 126 ntBASIC0.38□□□□□ -2.35
PRPF39Q86UA1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.38□□□□□ -2.35
PRPF39Q86UA1 RNY3P16-201ENST00000516338 101 ntBASIC0.38□□□□□ -2.35
PRPF39Q86UA1 RNA5SP94-201ENST00000516917 108 ntBASIC0.38□□□□□ -2.35
PRPF39Q86UA1 MIR3678-201ENST00000578455 94 ntBASIC0.38□□□□□ -2.35
PRPF39Q86UA1 RNU2-4P-201ENST00000606190 192 ntBASIC0.38□□□□□ -2.35
PRPF39Q86UA1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.38□□□□□ -2.35
PRPF39Q86UA1 SNORA22.1-201ENST00000362701 134 ntBASIC0.37□□□□□ -2.35
PRPF39Q86UA1 RNU6-597P-201ENST00000365620 102 ntBASIC0.37□□□□□ -2.35
PRPF39Q86UA1 Y_RNA.515-201ENST00000384535 112 ntBASIC0.37□□□□□ -2.35
PRPF39Q86UA1 RNA5SP127-201ENST00000411051 133 ntBASIC0.37□□□□□ -2.35
PRPF39Q86UA1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.37□□□□□ -2.35
PRPF39Q86UA1 AC021613.1-201ENST00000623880 111 ntBASIC0.37□□□□□ -2.35
PRPF39Q86UA1 MIR330-201ENST00000362196 94 ntBASIC0.36□□□□□ -2.35
PRPF39Q86UA1 SNORD27-201ENST00000363981 72 ntBASIC0.36□□□□□ -2.35
PRPF39Q86UA1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
PRPF39Q86UA1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.36□□□□□ -2.35
PRPF39Q86UA1 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
PRPF39Q86UA1 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
PRPF39Q86UA1 SNORA72.6-201ENST00000384520 129 ntBASIC0.35□□□□□ -2.35
PRPF39Q86UA1 RNU6-1011P-201ENST00000384668 107 ntBASIC0.35□□□□□ -2.35
PRPF39Q86UA1 MIR518A1-201ENST00000385068 85 ntBASIC0.35□□□□□ -2.35
PRPF39Q86UA1 AL358176.2-201ENST00000425769 204 ntBASIC0.35□□□□□ -2.35
PRPF39Q86UA1 RNU6-893P-201ENST00000458841 100 ntBASIC0.35□□□□□ -2.35
PRPF39Q86UA1 SNORD127-201ENST00000458892 86 ntBASIC0.35□□□□□ -2.35
PRPF39Q86UA1 AC141846.1-201ENST00000568348 142 ntBASIC0.35□□□□□ -2.35
PRPF39Q86UA1 MIR8087-201ENST00000612745 78 ntBASIC0.35□□□□□ -2.35
PRPF39Q86UA1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
PRPF39Q86UA1 Y_RNA.65-201ENST00000362846 100 ntBASIC0.34□□□□□ -2.36
PRPF39Q86UA1 RNU4-16P-201ENST00000364737 141 ntBASIC0.34□□□□□ -2.36
PRPF39Q86UA1 MIR1302-3-201ENST00000408128 138 ntBASIC0.34□□□□□ -2.36
PRPF39Q86UA1 MTND1P19-201ENST00000511780 315 ntBASIC0.34□□□□□ -2.36
PRPF39Q86UA1 AC022523.2-201ENST00000561045 150 ntBASIC0.34□□□□□ -2.36
PRPF39Q86UA1 AC133485.4-201ENST00000561835 220 ntBASIC0.34□□□□□ -2.36
PRPF39Q86UA1 AC011921.3-201ENST00000605540 361 ntBASIC0.34□□□□□ -2.36
PRPF39Q86UA1 SNORA25.18-201ENST00000607153 114 ntBASIC0.34□□□□□ -2.36
PRPF39Q86UA1 Y_RNA.182-201ENST00000363880 111 ntBASIC0.33□□□□□ -2.36
PRPF39Q86UA1 RNU6-978P-201ENST00000364371 103 ntBASIC0.33□□□□□ -2.36
PRPF39Q86UA1 RNU6-923P-201ENST00000364753 107 ntBASIC0.33□□□□□ -2.36
PRPF39Q86UA1 RNU4-70P-201ENST00000384579 139 ntBASIC0.33□□□□□ -2.36
PRPF39Q86UA1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.33□□□□□ -2.36
PRPF39Q86UA1 RNU6-1149P-201ENST00000516810 97 ntBASIC0.33□□□□□ -2.36
PRPF39Q86UA1 RNA5SP330-201ENST00000517096 96 ntBASIC0.33□□□□□ -2.36
PRPF39Q86UA1 AP003327.1-201ENST00000529684 127 ntBASIC0.33□□□□□ -2.36
PRPF39Q86UA1 MIR8066-201ENST00000617280 78 ntBASIC0.33□□□□□ -2.36
PRPF39Q86UA1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
PRPF39Q86UA1 Y_RNA.13-201ENST00000362403 112 ntBASIC0.32□□□□□ -2.36
PRPF39Q86UA1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.32□□□□□ -2.36
PRPF39Q86UA1 Y_RNA.121-201ENST00000363309 113 ntBASIC0.32□□□□□ -2.36
PRPF39Q86UA1 SNORA25.7-201ENST00000364375 127 ntBASIC0.32□□□□□ -2.36
PRPF39Q86UA1 RNU6-643P-201ENST00000384018 107 ntBASIC0.32□□□□□ -2.36
PRPF39Q86UA1 SNORA18-201ENST00000384416 132 ntBASIC0.32□□□□□ -2.36
PRPF39Q86UA1 RNU6-738P-201ENST00000384531 106 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 281 ms