Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC104984.5-201ENST00000586878 94 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 MIR376B-201ENST00000614515 100 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 ZNF658B-202ENST00000615961 3375 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 AL596028.1-201ENST00000326971 197 ntBASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 SNORD38B-201ENST00000384690 67 ntBASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 RNA5SP212-201ENST00000391223 107 ntBASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 BTF3P4-201ENST00000418852 495 ntBASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 MRPL35P3-201ENST00000421557 364 ntBASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 RNA5SP445-201ENST00000515889 115 ntBASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 RN7SKP12-201ENST00000516275 143 ntBASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 MIR1273D-201ENST00000577266 86 ntBASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 AC105081.1-201ENST00000617727 106 ntBASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 SNORD38B-202ENST00000625943 69 ntBASIC2.03□□□□□ -2.08
RNF111Q6ZNA4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
RNF111Q6ZNA4 RNA5SP173-201ENST00000364857 136 ntBASIC2.02□□□□□ -2.09
RNF111Q6ZNA4 Y_RNA.448-201ENST00000384185 108 ntBASIC2.02□□□□□ -2.09
RNF111Q6ZNA4 SNORD41-201ENST00000386967 70 ntBASIC2.02□□□□□ -2.09
RNF111Q6ZNA4 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
RNF111Q6ZNA4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RNF111Q6ZNA4 AC024614.2-201ENST00000577584 372 ntBASIC2.02□□□□□ -2.09
RNF111Q6ZNA4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.02□□□□□ -2.09
RNF111Q6ZNA4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RNF111Q6ZNA4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 SNORA70B-201ENST00000384210 135 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 MIR34C-201ENST00000384831 77 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 RN7SKP223-201ENST00000410582 62 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 AC109327.2-201ENST00000448339 378 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 Y_RNA.705-201ENST00000516862 110 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 MIR6715A-201ENST00000615929 79 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
RNF111Q6ZNA4 Y_RNA.17-201ENST00000362433 111 ntBASIC2□□□□□ -2.09
RNF111Q6ZNA4 U8.2-201ENST00000363156 134 ntBASIC2□□□□□ -2.09
RNF111Q6ZNA4 RNY1P10-201ENST00000363268 113 ntBASIC2□□□□□ -2.09
RNF111Q6ZNA4 RNU6-865P-201ENST00000364772 107 ntBASIC2□□□□□ -2.09
RNF111Q6ZNA4 Y_RNA.593-201ENST00000410292 98 ntBASIC2□□□□□ -2.09
RNF111Q6ZNA4 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
RNF111Q6ZNA4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2□□□□□ -2.09
RNF111Q6ZNA4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2□□□□□ -2.09
RNF111Q6ZNA4 MIR3945-201ENST00000581853 98 ntBASIC2□□□□□ -2.09
RNF111Q6ZNA4 MIR3192-201ENST00000584920 77 ntBASIC2□□□□□ -2.09
RNF111Q6ZNA4 AL773524.1-201ENST00000614065 229 ntBASIC2□□□□□ -2.09
RNF111Q6ZNA4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
RNF111Q6ZNA4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 Y_RNA.96-201ENST00000363092 109 ntBASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 Y_RNA.190-201ENST00000363964 101 ntBASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 RNU6-573P-201ENST00000383938 106 ntBASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 RNU6-1321P-201ENST00000390905 107 ntBASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 RNU6-887P-201ENST00000410660 100 ntBASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 RPS29P28-201ENST00000446439 141 ntBASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 RNU7-137P-201ENST00000516788 62 ntBASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 RNU6-1006P-201ENST00000516998 103 ntBASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 MIR4287-201ENST00000579398 78 ntBASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 AL096861.1-201ENST00000610899 123 ntBASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RNF111Q6ZNA4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
RNF111Q6ZNA4 RNA5SP48-201ENST00000363969 126 ntBASIC1.98□□□□□ -2.09
RNF111Q6ZNA4 RNU6-820P-201ENST00000384273 107 ntBASIC1.98□□□□□ -2.09
RNF111Q6ZNA4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RNF111Q6ZNA4 RNA5SP237-201ENST00000410414 113 ntBASIC1.98□□□□□ -2.09
RNF111Q6ZNA4 RNU6-592P-201ENST00000411333 103 ntBASIC1.98□□□□□ -2.09
RNF111Q6ZNA4 AC027119.1-201ENST00000440877 241 ntBASIC1.98□□□□□ -2.09
RNF111Q6ZNA4 RNU6-86P-201ENST00000606534 107 ntBASIC1.98□□□□□ -2.09
RNF111Q6ZNA4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
RNF111Q6ZNA4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 SNORA25.3-201ENST00000363205 127 ntBASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 SNORD114-10-201ENST00000363409 72 ntBASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 SNORD38.1-201ENST00000363863 68 ntBASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 RNU6-972P-201ENST00000391208 107 ntBASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 RNU6-947P-201ENST00000516264 106 ntBASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 SNORA77B-201ENST00000578179 125 ntBASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RNF111Q6ZNA4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 RNY1P13-201ENST00000365030 105 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 RNU6-813P-201ENST00000384691 107 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 RNU1-41P-201ENST00000516161 162 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 RNU1-48P-201ENST00000516400 162 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 AC141846.1-201ENST00000568348 142 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 AC015688.6-201ENST00000577737 104 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 MIR1245B-201ENST00000636115 69 ntBASIC1.96□□□□□ -2.1
RNF111Q6ZNA4 RNU6-1163P-201ENST00000364516 107 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 U8.15-201ENST00000390947 134 ntBASIC1.95□□□□□ -2.1
RNF111Q6ZNA4 AC244023.1-201ENST00000426884 112 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms