Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 Y_RNA.338-201ENST00000365320 114 ntBASIC0.76□□□□□ -2.29
LRIF1Q5T3J3 MTND5P15-201ENST00000434246 349 ntBASIC0.76□□□□□ -2.29
LRIF1Q5T3J3 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
LRIF1Q5T3J3 MIR4498-201ENST00000577599 66 ntBASIC0.76□□□□□ -2.29
LRIF1Q5T3J3 MIR3124-201ENST00000582636 67 ntBASIC0.76□□□□□ -2.29
LRIF1Q5T3J3 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
LRIF1Q5T3J3 AC104465.1-201ENST00000611365 139 ntBASIC0.76□□□□□ -2.29
LRIF1Q5T3J3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LRIF1Q5T3J3 RNU6-349P-201ENST00000362402 107 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 Y_RNA.272-201ENST00000364696 102 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 MIR520F-201ENST00000384824 87 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 MIR125B2-201ENST00000385128 89 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 SNORD37.2-201ENST00000391075 66 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 MIR938-201ENST00000401216 83 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 RNU6-588P-201ENST00000410281 105 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 RNA5SP237-201ENST00000410414 113 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 TRMT112P2-201ENST00000512910 132 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 AC020891.4-201ENST00000605745 93 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 AL662814.1-201ENST00000617364 121 ntBASIC0.75□□□□□ -2.29
LRIF1Q5T3J3 MIR337-201ENST00000362281 93 ntBASIC0.74□□□□□ -2.29
LRIF1Q5T3J3 RNY1P10-201ENST00000363268 113 ntBASIC0.74□□□□□ -2.29
LRIF1Q5T3J3 RNU1-119P-201ENST00000391122 165 ntBASIC0.74□□□□□ -2.29
LRIF1Q5T3J3 MIR1257-201ENST00000408490 117 ntBASIC0.74□□□□□ -2.29
LRIF1Q5T3J3 RNU7-56P-201ENST00000458744 62 ntBASIC0.74□□□□□ -2.29
LRIF1Q5T3J3 RNU7-185P-201ENST00000459215 60 ntBASIC0.74□□□□□ -2.29
LRIF1Q5T3J3 RNU6-113P-201ENST00000516653 101 ntBASIC0.74□□□□□ -2.29
LRIF1Q5T3J3 RNU6-794P-201ENST00000517261 64 ntBASIC0.74□□□□□ -2.29
LRIF1Q5T3J3 SNORA4-201ENST00000584302 138 ntBASIC0.74□□□□□ -2.29
LRIF1Q5T3J3 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
LRIF1Q5T3J3 SNORD18B-201ENST00000365659 72 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 MIR605-201ENST00000385078 83 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 RNA5SP144-201ENST00000410846 116 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 AC244098.3-201ENST00000424803 96 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 RNU6-1053P-201ENST00000515930 101 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 Y_RNA.757-201ENST00000578934 114 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
LRIF1Q5T3J3 RNA5SP432-201ENST00000362480 116 ntBASIC0.72□□□□□ -2.29
LRIF1Q5T3J3 RNU4-16P-201ENST00000364737 141 ntBASIC0.72□□□□□ -2.29
LRIF1Q5T3J3 MIR520H-201ENST00000385126 88 ntBASIC0.72□□□□□ -2.29
LRIF1Q5T3J3 Y_RNA.580-201ENST00000391004 95 ntBASIC0.72□□□□□ -2.29
LRIF1Q5T3J3 Y_RNA.584-201ENST00000391090 114 ntBASIC0.72□□□□□ -2.29
LRIF1Q5T3J3 AL022718.1-201ENST00000412004 84 ntBASIC0.72□□□□□ -2.29
LRIF1Q5T3J3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.72□□□□□ -2.29
LRIF1Q5T3J3 MIR3658-201ENST00000636291 56 ntBASIC0.72□□□□□ -2.29
LRIF1Q5T3J3 SNORD115-2-201ENST00000362842 82 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 Y_RNA.120-201ENST00000363304 110 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 SNORD115-20-201ENST00000365099 82 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 MIR573-201ENST00000384964 99 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 RNU6-447P-201ENST00000410293 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 RNU6-355P-201ENST00000410427 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 RNU6-791P-201ENST00000410467 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 RNU6-705P-201ENST00000410601 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 RNU6-860P-201ENST00000410860 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 RNU6-785P-201ENST00000411324 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 AC015818.7-201ENST00000428754 109 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 AL603825.1-201ENST00000438481 80 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 AC087499.7-201ENST00000441958 109 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 AC011195.1-201ENST00000578177 177 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 SNORD92-201ENST00000585078 85 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 U6.90-201ENST00000614007 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 U6.70-201ENST00000620287 104 ntBASIC0.71□□□□□ -2.3
LRIF1Q5T3J3 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 RNU6-690P-201ENST00000365242 106 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 RNU4-45P-201ENST00000365469 141 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 RNU6-364P-201ENST00000384387 107 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 AL603914.1-201ENST00000401964 204 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 RNU6-1086P-201ENST00000410930 100 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 RPL39P25-201ENST00000449384 154 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 RNU7-156P-201ENST00000517214 74 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 AC112693.2-201ENST00000556538 232 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 AC141846.1-201ENST00000568348 142 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 FTX_2.1-201ENST00000618816 94 ntBASIC0.7□□□□□ -2.3
LRIF1Q5T3J3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
LRIF1Q5T3J3 MIR373-201ENST00000362273 69 ntBASIC0.69□□□□□ -2.3
LRIF1Q5T3J3 Y_RNA.251-201ENST00000364551 99 ntBASIC0.69□□□□□ -2.3
LRIF1Q5T3J3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
LRIF1Q5T3J3 RNU6-449P-201ENST00000383914 107 ntBASIC0.69□□□□□ -2.3
LRIF1Q5T3J3 SNORA18-201ENST00000384416 132 ntBASIC0.69□□□□□ -2.3
LRIF1Q5T3J3 RNU6-394P-201ENST00000410735 107 ntBASIC0.69□□□□□ -2.3
LRIF1Q5T3J3 RNU6-321P-201ENST00000410912 106 ntBASIC0.69□□□□□ -2.3
LRIF1Q5T3J3 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
LRIF1Q5T3J3 RNU2-60P-201ENST00000517290 128 ntBASIC0.69□□□□□ -2.3
LRIF1Q5T3J3 RNU6-949P-201ENST00000384040 107 ntBASIC0.68□□□□□ -2.3
LRIF1Q5T3J3 SNORD93-201ENST00000408813 74 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 272.9 ms