Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 RNU6-330P-201ENST00000363015 107 ntBASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 RNA5SP344-201ENST00000411081 104 ntBASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 BX276092.1-201ENST00000427368 251 ntBASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 AC104389.3-201ENST00000445629 235 ntBASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 AC079600.2-201ENST00000550076 130 ntBASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 MIR4298-201ENST00000584380 73 ntBASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 AL035425.3-201ENST00000564206 4996 ntBASIC2.64□□□□□ -1.99
RNFT1Q5M7Z0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 Y_RNA.42-201ENST00000362660 108 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 RNU6-895P-201ENST00000384125 103 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 RNU6-851P-201ENST00000384565 107 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 MIR516A2-201ENST00000384888 90 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 MIR516A1-201ENST00000385033 90 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 SNORD90-201ENST00000391145 111 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 AC019129.1-201ENST00000403786 261 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 AC011753.1-201ENST00000451001 220 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 MIR4319-201ENST00000577285 85 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 MIR4511-201ENST00000582784 87 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 U6.109-201ENST00000636749 87 ntBASIC2.63□□□□□ -1.99
RNFT1Q5M7Z0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RNFT1Q5M7Z0 MIRLET7F1-201ENST00000362202 87 ntBASIC2.62□□□□□ -1.99
RNFT1Q5M7Z0 Y_RNA.119-201ENST00000363301 96 ntBASIC2.62□□□□□ -1.99
RNFT1Q5M7Z0 RNU6-340P-201ENST00000364005 107 ntBASIC2.62□□□□□ -1.99
RNFT1Q5M7Z0 RNU6-291P-201ENST00000384720 107 ntBASIC2.62□□□□□ -1.99
RNFT1Q5M7Z0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.62□□□□□ -1.99
RNFT1Q5M7Z0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.62□□□□□ -1.99
RNFT1Q5M7Z0 MIR449A-201ENST00000362113 91 ntBASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 SNORD115-3-201ENST00000363100 82 ntBASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 AC092628.1-201ENST00000436250 252 ntBASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 AC079150.2-201ENST00000443733 78 ntBASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 AC245517.4-201ENST00000448601 281 ntBASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 snoU13.17-201ENST00000458802 104 ntBASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 MIR3935-201ENST00000583472 104 ntBASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 AL627230.6-201ENST00000611129 280 ntBASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
RNFT1Q5M7Z0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 AC062016.1-201ENST00000355719 319 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 MIR424-201ENST00000362227 98 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 SNORA9.2-201ENST00000365361 133 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 MIR520A-201ENST00000384862 85 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 MIR520C-201ENST00000385005 87 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 RNA5SP274-201ENST00000410484 108 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 AC087499.2-201ENST00000432861 149 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 AC099513.1-201ENST00000490423 301 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 MIR4709-201ENST00000577272 72 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 MIR3162-201ENST00000581818 82 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 MIR4251-201ENST00000635819 61 ntBASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNFT1Q5M7Z0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNFT1Q5M7Z0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RNFT1Q5M7Z0 RNU6-681P-201ENST00000364012 104 ntBASIC2.59□□□□□ -1.99
RNFT1Q5M7Z0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.59□□□□□ -1.99
RNFT1Q5M7Z0 AC110620.1-201ENST00000416042 228 ntBASIC2.59□□□□□ -1.99
RNFT1Q5M7Z0 snoU13.2-201ENST00000459201 104 ntBASIC2.59□□□□□ -1.99
RNFT1Q5M7Z0 AC107016.2-201ENST00000547968 190 ntBASIC2.59□□□□□ -1.99
RNFT1Q5M7Z0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.59□□□□□ -1.99
RNFT1Q5M7Z0 AL096861.1-201ENST00000610899 123 ntBASIC2.59□□□□□ -1.99
RNFT1Q5M7Z0 MIR8053-201ENST00000613344 75 ntBASIC2.59□□□□□ -1.99
RNFT1Q5M7Z0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RNFT1Q5M7Z0 RN7SL633P-201ENST00000488974 297 ntBASIC2.58□□□□□ -2
RNFT1Q5M7Z0 MIR3675-201ENST00000583661 73 ntBASIC2.58□□□□□ -2
RNFT1Q5M7Z0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
RNFT1Q5M7Z0 Y_RNA.207-201ENST00000364142 106 ntBASIC2.57□□□□□ -2
RNFT1Q5M7Z0 RNU1-112P-201ENST00000364401 164 ntBASIC2.57□□□□□ -2
RNFT1Q5M7Z0 RNY4P3-201ENST00000365254 95 ntBASIC2.57□□□□□ -2
RNFT1Q5M7Z0 RNU6-1051P-201ENST00000365471 102 ntBASIC2.57□□□□□ -2
RNFT1Q5M7Z0 MIR563-201ENST00000385080 79 ntBASIC2.57□□□□□ -2
RNFT1Q5M7Z0 Y_RNA.606-201ENST00000410579 103 ntBASIC2.57□□□□□ -2
RNFT1Q5M7Z0 RNA5SP184-201ENST00000411071 108 ntBASIC2.57□□□□□ -2
RNFT1Q5M7Z0 BX510359.4-201ENST00000423750 193 ntBASIC2.57□□□□□ -2
RNFT1Q5M7Z0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RNFT1Q5M7Z0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RNFT1Q5M7Z0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.56□□□□□ -2
RNFT1Q5M7Z0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RNFT1Q5M7Z0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.56□□□□□ -2
RNFT1Q5M7Z0 RNU6-957P-201ENST00000363652 99 ntBASIC2.56□□□□□ -2
RNFT1Q5M7Z0 SNORD45A-201ENST00000384512 84 ntBASIC2.56□□□□□ -2
RNFT1Q5M7Z0 SNORA46-201ENST00000384762 135 ntBASIC2.56□□□□□ -2
RNFT1Q5M7Z0 RNU7-26P-201ENST00000458980 63 ntBASIC2.56□□□□□ -2
RNFT1Q5M7Z0 RNU6-881P-201ENST00000516813 102 ntBASIC2.56□□□□□ -2
RNFT1Q5M7Z0 RNA5SP481-201ENST00000516814 122 ntBASIC2.56□□□□□ -2
RNFT1Q5M7Z0 RNA5SP437-201ENST00000517249 129 ntBASIC2.56□□□□□ -2
RNFT1Q5M7Z0 SNORA4-201ENST00000584302 138 ntBASIC2.56□□□□□ -2
RNFT1Q5M7Z0 Y_RNA.371-201ENST00000365591 113 ntBASIC2.55□□□□□ -2
RNFT1Q5M7Z0 AL138827.1-201ENST00000402666 306 ntBASIC2.55□□□□□ -2
RNFT1Q5M7Z0 RNU2-7P-201ENST00000410794 178 ntBASIC2.55□□□□□ -2
RNFT1Q5M7Z0 SNORD109B-201ENST00000458961 67 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms