Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 AC022523.2-201ENST00000561045 150 ntBASIC1.57□□□□□ -2.16
PHC1P78364 AL670379.3-201ENST00000605040 251 ntBASIC1.57□□□□□ -2.16
PHC1P78364 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
PHC1P78364 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
PHC1P78364 Y_RNA.338-201ENST00000365320 114 ntBASIC1.56□□□□□ -2.16
PHC1P78364 RNU6-1056P-201ENST00000383996 107 ntBASIC1.56□□□□□ -2.16
PHC1P78364 RNU6-1144P-201ENST00000384247 104 ntBASIC1.56□□□□□ -2.16
PHC1P78364 RNU6-1237P-201ENST00000384777 107 ntBASIC1.56□□□□□ -2.16
PHC1P78364 MIR548A3-201ENST00000385297 97 ntBASIC1.56□□□□□ -2.16
PHC1P78364 SNORD12C-201ENST00000386307 89 ntBASIC1.56□□□□□ -2.16
PHC1P78364 AL603825.1-201ENST00000438481 80 ntBASIC1.56□□□□□ -2.16
PHC1P78364 MIR6129-201ENST00000616087 109 ntBASIC1.56□□□□□ -2.16
PHC1P78364 Y_RNA.198-201ENST00000364013 98 ntBASIC1.55□□□□□ -2.16
PHC1P78364 Y_RNA.299-201ENST00000364973 94 ntBASIC1.55□□□□□ -2.16
PHC1P78364 MIR222-201ENST00000384992 110 ntBASIC1.55□□□□□ -2.16
PHC1P78364 RNU6-910P-201ENST00000390844 107 ntBASIC1.55□□□□□ -2.16
PHC1P78364 RNU6-205P-201ENST00000390858 107 ntBASIC1.55□□□□□ -2.16
PHC1P78364 RNA5SP237-201ENST00000410414 113 ntBASIC1.55□□□□□ -2.16
PHC1P78364 RNU6-1258P-201ENST00000516911 111 ntBASIC1.55□□□□□ -2.16
PHC1P78364 MIR4264-201ENST00000583520 66 ntBASIC1.55□□□□□ -2.16
PHC1P78364 MIR6516-201ENST00000630554 81 ntBASIC1.55□□□□□ -2.16
PHC1P78364 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
PHC1P78364 SNORD20-201ENST00000384550 80 ntBASIC1.54□□□□□ -2.16
PHC1P78364 RNU6-429P-201ENST00000384582 108 ntBASIC1.54□□□□□ -2.16
PHC1P78364 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.54□□□□□ -2.16
PHC1P78364 Y_RNA.649-201ENST00000459077 103 ntBASIC1.54□□□□□ -2.16
PHC1P78364 AC108729.3-201ENST00000513484 108 ntBASIC1.54□□□□□ -2.16
PHC1P78364 SEPT14P17-201ENST00000617978 177 ntBASIC1.54□□□□□ -2.16
PHC1P78364 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
PHC1P78364 RNU6-654P-201ENST00000364373 107 ntBASIC1.53□□□□□ -2.16
PHC1P78364 RNU6-1325P-201ENST00000364905 105 ntBASIC1.53□□□□□ -2.16
PHC1P78364 RNU6-215P-201ENST00000365169 102 ntBASIC1.53□□□□□ -2.16
PHC1P78364 SNORA32-201ENST00000384072 121 ntBASIC1.53□□□□□ -2.16
PHC1P78364 Y_RNA.470-201ENST00000384307 117 ntBASIC1.53□□□□□ -2.16
PHC1P78364 SNORA18-201ENST00000384416 132 ntBASIC1.53□□□□□ -2.16
PHC1P78364 RNU6-1104P-201ENST00000384723 104 ntBASIC1.53□□□□□ -2.16
PHC1P78364 MT-TI-201ENST00000387365 69 ntBASIC1.53□□□□□ -2.16
PHC1P78364 MT-TN-201ENST00000387400 73 ntBASIC1.53□□□□□ -2.16
PHC1P78364 MRPL35P3-201ENST00000421557 364 ntBASIC1.53□□□□□ -2.16
PHC1P78364 AL591704.2-201ENST00000421658 181 ntBASIC1.53□□□□□ -2.16
PHC1P78364 SNORA70.22-201ENST00000517160 124 ntBASIC1.53□□□□□ -2.16
PHC1P78364 MIR3163-201ENST00000581592 73 ntBASIC1.53□□□□□ -2.16
PHC1P78364 RNA5SP190-201ENST00000365222 118 ntBASIC1.52□□□□□ -2.17
PHC1P78364 SNORA2B-201ENST00000384583 137 ntBASIC1.52□□□□□ -2.17
PHC1P78364 MIR548A1-201ENST00000385041 97 ntBASIC1.52□□□□□ -2.17
PHC1P78364 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.52□□□□□ -2.17
PHC1P78364 SNORD77B-201ENST00000391112 67 ntBASIC1.52□□□□□ -2.17
PHC1P78364 RNA5SP95-201ENST00000410319 137 ntBASIC1.52□□□□□ -2.17
PHC1P78364 RNU6-613P-201ENST00000410412 108 ntBASIC1.52□□□□□ -2.17
PHC1P78364 RNU4-69P-201ENST00000410677 143 ntBASIC1.52□□□□□ -2.17
PHC1P78364 RNU7-62P-201ENST00000458856 62 ntBASIC1.52□□□□□ -2.17
PHC1P78364 RPS23P4-201ENST00000487908 423 ntBASIC1.52□□□□□ -2.17
PHC1P78364 RNU7-6P-201ENST00000516845 62 ntBASIC1.52□□□□□ -2.17
PHC1P78364 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.52□□□□□ -2.17
PHC1P78364 MIR548AE2-201ENST00000583456 67 ntBASIC1.52□□□□□ -2.17
PHC1P78364 SNORD115-2-201ENST00000362842 82 ntBASIC1.51□□□□□ -2.17
PHC1P78364 SNORD115-20-201ENST00000365099 82 ntBASIC1.51□□□□□ -2.17
PHC1P78364 SNORA80D-201ENST00000384488 135 ntBASIC1.51□□□□□ -2.17
PHC1P78364 SNORD116-21-201ENST00000384507 92 ntBASIC1.51□□□□□ -2.17
PHC1P78364 MIR588-201ENST00000384900 83 ntBASIC1.51□□□□□ -2.17
PHC1P78364 SNORA75.2-201ENST00000391138 150 ntBASIC1.51□□□□□ -2.17
PHC1P78364 SNORA75.3-201ENST00000391231 150 ntBASIC1.51□□□□□ -2.17
PHC1P78364 AC244023.1-201ENST00000426884 112 ntBASIC1.51□□□□□ -2.17
PHC1P78364 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.51□□□□□ -2.17
PHC1P78364 AC242498.1-201ENST00000604134 111 ntBASIC1.51□□□□□ -2.17
PHC1P78364 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
PHC1P78364 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.51□□□□□ -2.17
PHC1P78364 RNU6-342P-201ENST00000384521 104 ntBASIC1.5□□□□□ -2.17
PHC1P78364 RPL39P25-201ENST00000449384 154 ntBASIC1.5□□□□□ -2.17
PHC1P78364 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
PHC1P78364 Y_RNA.676-201ENST00000516393 96 ntBASIC1.5□□□□□ -2.17
PHC1P78364 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.5□□□□□ -2.17
PHC1P78364 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PHC1P78364 MIR377-201ENST00000362145 69 ntBASIC1.49□□□□□ -2.17
PHC1P78364 Y_RNA.35-201ENST00000362601 101 ntBASIC1.49□□□□□ -2.17
PHC1P78364 RNY4P6-201ENST00000363667 96 ntBASIC1.49□□□□□ -2.17
PHC1P78364 Y_RNA.363-201ENST00000365529 113 ntBASIC1.49□□□□□ -2.17
PHC1P78364 RNU6-880P-201ENST00000384526 107 ntBASIC1.49□□□□□ -2.17
PHC1P78364 AC108667.1-201ENST00000428618 249 ntBASIC1.49□□□□□ -2.17
PHC1P78364 snoU13.2-201ENST00000459201 104 ntBASIC1.49□□□□□ -2.17
PHC1P78364 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.49□□□□□ -2.17
PHC1P78364 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
PHC1P78364 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
PHC1P78364 RNU6-1086P-201ENST00000410930 100 ntBASIC1.48□□□□□ -2.17
PHC1P78364 RNU7-90P-201ENST00000459216 62 ntBASIC1.48□□□□□ -2.17
PHC1P78364 RNU6-589P-201ENST00000516485 107 ntBASIC1.48□□□□□ -2.17
PHC1P78364 RNU6-919P-201ENST00000516731 104 ntBASIC1.48□□□□□ -2.17
PHC1P78364 AC023827.1-201ENST00000569247 97 ntBASIC1.48□□□□□ -2.17
PHC1P78364 AL035470.1-201ENST00000622571 220 ntBASIC1.48□□□□□ -2.17
PHC1P78364 AL391516.1-201ENST00000554380 2449 ntBASIC1.47□□□□□ -2.17
PHC1P78364 MIR378A-201ENST00000362177 66 ntBASIC1.47□□□□□ -2.17
PHC1P78364 RNA5SP327-201ENST00000362494 101 ntBASIC1.47□□□□□ -2.17
PHC1P78364 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.47□□□□□ -2.17
PHC1P78364 RNU6-1165P-201ENST00000410119 107 ntBASIC1.47□□□□□ -2.17
PHC1P78364 AL035461.1-201ENST00000421490 332 ntBASIC1.47□□□□□ -2.17
PHC1P78364 AC007012.1-201ENST00000567192 175 ntBASIC1.47□□□□□ -2.17
PHC1P78364 SNORD113.3-201ENST00000364630 78 ntBASIC1.46□□□□□ -2.18
PHC1P78364 SNORA25-201ENST00000384384 134 ntBASIC1.46□□□□□ -2.18
PHC1P78364 Y_RNA.549-201ENST00000384657 102 ntBASIC1.46□□□□□ -2.18
PHC1P78364 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms