Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU6-113P-201ENST00000516653 101 ntBASIC0.91□□□□□ -2.26
CLDN20P56880 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 SNORA25.9-201ENST00000365087 128 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 Y_RNA.400-201ENST00000383963 111 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 MIR588-201ENST00000384900 83 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 SNORD12C-201ENST00000386307 89 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 AL603914.1-201ENST00000401964 204 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 MIR548I1-201ENST00000408810 149 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 MIR548X2-201ENST00000579776 100 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 AC021753.1-201ENST00000635724 168 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
CLDN20P56880 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CLDN20P56880 RNU6-690P-201ENST00000365242 106 ntBASIC0.89□□□□□ -2.27
CLDN20P56880 MIR563-201ENST00000385080 79 ntBASIC0.89□□□□□ -2.27
CLDN20P56880 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.89□□□□□ -2.27
CLDN20P56880 RNA5SP144-201ENST00000410846 116 ntBASIC0.89□□□□□ -2.27
CLDN20P56880 POLR2J4-204ENST00000418424 324 ntBASIC0.89□□□□□ -2.27
CLDN20P56880 Y_RNA.690-201ENST00000516603 95 ntBASIC0.89□□□□□ -2.27
CLDN20P56880 MTND5P41-201ENST00000517498 206 ntBASIC0.89□□□□□ -2.27
CLDN20P56880 Y_RNA.215-201ENST00000364204 112 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 RNU6-934P-201ENST00000365154 107 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 RNU6-209P-201ENST00000384118 107 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 MIR1827-201ENST00000408549 66 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 RNU6-1165P-201ENST00000410119 107 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 AL022718.1-201ENST00000412004 84 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 MIR18B-201ENST00000454574 71 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 U7.7-201ENST00000459276 60 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 SNORA25.12-201ENST00000516202 82 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 RNU6-1110P-201ENST00000516462 101 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 Y_RNA.686-201ENST00000516548 134 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 AL136317.1-201ENST00000612653 226 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 MIR6504-201ENST00000613520 61 ntBASIC0.88□□□□□ -2.27
CLDN20P56880 MIR1-1-201ENST00000362147 71 ntBASIC0.87□□□□□ -2.27
CLDN20P56880 Y_RNA.170-201ENST00000363746 110 ntBASIC0.87□□□□□ -2.27
CLDN20P56880 SNORD114-22-201ENST00000365423 72 ntBASIC0.87□□□□□ -2.27
CLDN20P56880 MIR499A-201ENST00000384903 122 ntBASIC0.87□□□□□ -2.27
CLDN20P56880 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.87□□□□□ -2.27
CLDN20P56880 snoU13.21-201ENST00000459368 105 ntBASIC0.87□□□□□ -2.27
CLDN20P56880 RNA5SP255-201ENST00000516370 107 ntBASIC0.87□□□□□ -2.27
CLDN20P56880 Y_RNA.757-201ENST00000578934 114 ntBASIC0.87□□□□□ -2.27
CLDN20P56880 uc_338.6-201ENST00000613544 171 ntBASIC0.87□□□□□ -2.27
CLDN20P56880 AC010332.2-201ENST00000613083 1904 ntBASIC0.87□□□□□ -2.27
CLDN20P56880 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CLDN20P56880 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.86□□□□□ -2.27
CLDN20P56880 Y_RNA.226-201ENST00000364337 114 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 RNU6-309P-201ENST00000364573 106 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 RNU1-93P-201ENST00000364704 169 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 RNU6-915P-201ENST00000364943 103 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 MT-TF-201ENST00000387314 71 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 RNU6-460P-201ENST00000391158 108 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 RNA5SP237-201ENST00000410414 113 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 SNORD83.1-201ENST00000411362 77 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 RPS26P5-201ENST00000418544 335 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 Y_RNA.651-201ENST00000459380 103 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.86□□□□□ -2.27
CLDN20P56880 RNU6-240P-201ENST00000516098 97 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.86□□□□□ -2.27
CLDN20P56880 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
CLDN20P56880 MIR100-201ENST00000385259 80 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 SNORD89-201ENST00000390981 114 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 RNA5SP247-201ENST00000411181 105 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 RNU7-200P-201ENST00000516105 62 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 AC133485.4-201ENST00000561835 220 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 AC138907.4-201ENST00000570107 226 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 MIR4771-2-201ENST00000577758 74 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 AC025627.3-201ENST00000582078 182 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 MIR4771-1-201ENST00000582617 74 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 MIR4305-201ENST00000583252 102 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.85□□□□□ -2.27
CLDN20P56880 AL662814.1-201ENST00000617364 121 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 AP001340.1-201ENST00000624405 217 ntBASIC0.85□□□□□ -2.27
CLDN20P56880 MIR30D-201ENST00000362283 70 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 RNU6-508P-201ENST00000363231 103 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 Y_RNA.191-201ENST00000363972 113 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 RNY1P5-201ENST00000383890 115 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 Y_RNA.488-201ENST00000384403 102 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 MIR569-201ENST00000385228 96 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 RNU7-113P-201ENST00000459273 62 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 AC113410.1-201ENST00000505029 247 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 Y_RNA.692-201ENST00000516627 105 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 RNU6-1258P-201ENST00000516911 111 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 RNU6-255P-201ENST00000516957 105 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 AP001328.1-201ENST00000528550 176 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 AC021443.1-201ENST00000604478 211 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
CLDN20P56880 RNU6-369P-201ENST00000362515 102 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 SNORD115-2-201ENST00000362842 82 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 Y_RNA.171-201ENST00000363760 102 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 SNORD115-20-201ENST00000365099 82 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 Y_RNA.420-201ENST00000384043 110 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 SNORA18-201ENST00000384416 132 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 RNU6-1237P-201ENST00000384777 107 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 MT-TR-201ENST00000387439 65 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 MIR1287-201ENST00000408492 90 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
CLDN20P56880 MIR3121-201ENST00000579680 77 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 270.8 ms