Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 RNU6-994P-201ENST00000410507 111 ntBASIC0.8□□□□□ -2.28
PAX9P55771 RNA5SP144-201ENST00000410846 116 ntBASIC0.8□□□□□ -2.28
PAX9P55771 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.8□□□□□ -2.28
PAX9P55771 SNORA25.12-201ENST00000516202 82 ntBASIC0.8□□□□□ -2.28
PAX9P55771 RNA5SP255-201ENST00000516370 107 ntBASIC0.8□□□□□ -2.28
PAX9P55771 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
PAX9P55771 MIR30D-201ENST00000362283 70 ntBASIC0.79□□□□□ -2.28
PAX9P55771 Y_RNA.171-201ENST00000363760 102 ntBASIC0.79□□□□□ -2.28
PAX9P55771 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
PAX9P55771 MIR569-201ENST00000385228 96 ntBASIC0.79□□□□□ -2.28
PAX9P55771 AL603914.1-201ENST00000401964 204 ntBASIC0.79□□□□□ -2.28
PAX9P55771 RNU6-1165P-201ENST00000410119 107 ntBASIC0.79□□□□□ -2.28
PAX9P55771 MTATP6P21-201ENST00000440681 189 ntBASIC0.79□□□□□ -2.28
PAX9P55771 AC087343.1-201ENST00000477341 475 ntBASIC0.79□□□□□ -2.28
PAX9P55771 PDCD5P2-201ENST00000507570 312 ntBASIC0.79□□□□□ -2.28
PAX9P55771 RNU6-240P-201ENST00000516098 97 ntBASIC0.79□□□□□ -2.28
PAX9P55771 Y_RNA.690-201ENST00000516603 95 ntBASIC0.79□□□□□ -2.28
PAX9P55771 AL359821.1-201ENST00000605519 182 ntBASIC0.79□□□□□ -2.28
PAX9P55771 Y_RNA.215-201ENST00000364204 112 ntBASIC0.78□□□□□ -2.28
PAX9P55771 RNU6-690P-201ENST00000365242 106 ntBASIC0.78□□□□□ -2.28
PAX9P55771 Y_RNA.354-201ENST00000365448 111 ntBASIC0.78□□□□□ -2.28
PAX9P55771 RNU6-209P-201ENST00000384118 107 ntBASIC0.78□□□□□ -2.28
PAX9P55771 SNORD89-201ENST00000390981 114 ntBASIC0.78□□□□□ -2.28
PAX9P55771 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.78□□□□□ -2.28
PAX9P55771 MIR1827-201ENST00000408549 66 ntBASIC0.78□□□□□ -2.28
PAX9P55771 FABP5P4-201ENST00000437203 171 ntBASIC0.78□□□□□ -2.28
PAX9P55771 TRMT112P2-201ENST00000512910 132 ntBASIC0.78□□□□□ -2.28
PAX9P55771 RNU7-200P-201ENST00000516105 62 ntBASIC0.78□□□□□ -2.28
PAX9P55771 MIR548X2-201ENST00000579776 100 ntBASIC0.78□□□□□ -2.28
PAX9P55771 AC011603.4-201ENST00000611325 277 ntBASIC0.78□□□□□ -2.28
PAX9P55771 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.78□□□□□ -2.28
PAX9P55771 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.29
PAX9P55771 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.77□□□□□ -2.29
PAX9P55771 RNU6-934P-201ENST00000365154 107 ntBASIC0.77□□□□□ -2.29
PAX9P55771 Y_RNA.470-201ENST00000384307 117 ntBASIC0.77□□□□□ -2.29
PAX9P55771 RNU6-342P-201ENST00000384521 104 ntBASIC0.77□□□□□ -2.29
PAX9P55771 RNU6-1237P-201ENST00000384777 107 ntBASIC0.77□□□□□ -2.29
PAX9P55771 RPS26P5-201ENST00000418544 335 ntBASIC0.77□□□□□ -2.29
PAX9P55771 RNA5SP272-201ENST00000516095 111 ntBASIC0.77□□□□□ -2.29
PAX9P55771 RNU2-35P-201ENST00000516446 142 ntBASIC0.77□□□□□ -2.29
PAX9P55771 MIR4498-201ENST00000577599 66 ntBASIC0.77□□□□□ -2.29
PAX9P55771 AC108081.1-201ENST00000604358 221 ntBASIC0.77□□□□□ -2.29
PAX9P55771 AC020891.4-201ENST00000605745 93 ntBASIC0.77□□□□□ -2.29
PAX9P55771 AL662814.1-201ENST00000617364 121 ntBASIC0.77□□□□□ -2.29
PAX9P55771 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.77□□□□□ -2.29
PAX9P55771 RNU6-915P-201ENST00000364943 103 ntBASIC0.76□□□□□ -2.29
PAX9P55771 RNU6-53P-201ENST00000365367 106 ntBASIC0.76□□□□□ -2.29
PAX9P55771 SNORD18B-201ENST00000365659 72 ntBASIC0.76□□□□□ -2.29
PAX9P55771 Y_RNA.506-201ENST00000384494 102 ntBASIC0.76□□□□□ -2.29
PAX9P55771 MIR513C-201ENST00000401352 84 ntBASIC0.76□□□□□ -2.29
PAX9P55771 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.76□□□□□ -2.29
PAX9P55771 AL603825.1-201ENST00000438481 80 ntBASIC0.76□□□□□ -2.29
PAX9P55771 MIR18B-201ENST00000454574 71 ntBASIC0.76□□□□□ -2.29
PAX9P55771 U7.7-201ENST00000459276 60 ntBASIC0.76□□□□□ -2.29
PAX9P55771 AC113410.1-201ENST00000505029 247 ntBASIC0.76□□□□□ -2.29
PAX9P55771 RNU6-1053P-201ENST00000515930 101 ntBASIC0.76□□□□□ -2.29
PAX9P55771 RNU6-1110P-201ENST00000516462 101 ntBASIC0.76□□□□□ -2.29
PAX9P55771 MIR4771-2-201ENST00000577758 74 ntBASIC0.76□□□□□ -2.29
PAX9P55771 MIR4771-1-201ENST00000582617 74 ntBASIC0.76□□□□□ -2.29
PAX9P55771 MIR4305-201ENST00000583252 102 ntBASIC0.76□□□□□ -2.29
PAX9P55771 RNU6-392P-201ENST00000364926 101 ntBASIC0.75□□□□□ -2.29
PAX9P55771 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
PAX9P55771 Y_RNA.366-201ENST00000365540 102 ntBASIC0.75□□□□□ -2.29
PAX9P55771 Y_RNA.420-201ENST00000384043 110 ntBASIC0.75□□□□□ -2.29
PAX9P55771 AL512326.2-201ENST00000426359 151 ntBASIC0.75□□□□□ -2.29
PAX9P55771 AC067940.1-201ENST00000458411 300 ntBASIC0.75□□□□□ -2.29
PAX9P55771 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.75□□□□□ -2.29
PAX9P55771 RNU6-346P-201ENST00000516288 111 ntBASIC0.75□□□□□ -2.29
PAX9P55771 RNU6-426P-201ENST00000516464 97 ntBASIC0.75□□□□□ -2.29
PAX9P55771 AC133485.4-201ENST00000561835 220 ntBASIC0.75□□□□□ -2.29
PAX9P55771 AC138907.4-201ENST00000570107 226 ntBASIC0.75□□□□□ -2.29
PAX9P55771 MIR3121-201ENST00000579680 77 ntBASIC0.75□□□□□ -2.29
PAX9P55771 MIR1-1-201ENST00000362147 71 ntBASIC0.74□□□□□ -2.29
PAX9P55771 SNORA18-201ENST00000384416 132 ntBASIC0.74□□□□□ -2.29
PAX9P55771 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
PAX9P55771 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.74□□□□□ -2.29
PAX9P55771 RNU6-893P-201ENST00000458841 100 ntBASIC0.74□□□□□ -2.29
PAX9P55771 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.74□□□□□ -2.29
PAX9P55771 RNU5E-3P-201ENST00000515913 68 ntBASIC0.74□□□□□ -2.29
PAX9P55771 RNU6-113P-201ENST00000516653 101 ntBASIC0.74□□□□□ -2.29
PAX9P55771 AC141846.1-201ENST00000568348 142 ntBASIC0.74□□□□□ -2.29
PAX9P55771 MIR4676-201ENST00000583078 72 ntBASIC0.74□□□□□ -2.29
PAX9P55771 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
PAX9P55771 AC021443.1-201ENST00000604478 211 ntBASIC0.74□□□□□ -2.29
PAX9P55771 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.74□□□□□ -2.29
PAX9P55771 AP001340.1-201ENST00000624405 217 ntBASIC0.74□□□□□ -2.29
PAX9P55771 AC023934.1-201ENST00000574529 2389 ntBASIC0.73□□□□□ -2.29
PAX9P55771 Y_RNA.294-201ENST00000364916 102 ntBASIC0.73□□□□□ -2.29
PAX9P55771 Y_RNA.488-201ENST00000384403 102 ntBASIC0.73□□□□□ -2.29
PAX9P55771 MIR605-201ENST00000385078 83 ntBASIC0.73□□□□□ -2.29
PAX9P55771 MT-TF-201ENST00000387314 71 ntBASIC0.73□□□□□ -2.29
PAX9P55771 RNU6-321P-201ENST00000410912 106 ntBASIC0.73□□□□□ -2.29
PAX9P55771 AL022718.1-201ENST00000412004 84 ntBASIC0.73□□□□□ -2.29
PAX9P55771 RNU7-185P-201ENST00000459215 60 ntBASIC0.73□□□□□ -2.29
PAX9P55771 RNU7-113P-201ENST00000459273 62 ntBASIC0.73□□□□□ -2.29
PAX9P55771 RNU7-123P-201ENST00000515911 60 ntBASIC0.73□□□□□ -2.29
PAX9P55771 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.73□□□□□ -2.29
PAX9P55771 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.73□□□□□ -2.29
PAX9P55771 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
PAX9P55771 RMST_2.1-201ENST00000617263 136 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms