Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SLC6A11P48066 SNORA17.3-201ENST00000391159 129 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 AL356379.1-201ENST00000414105 126 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC6A11P48066 MIR1270-201ENST00000459320 83 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 AC079804.2-201ENST00000490376 200 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 RNU6-904P-201ENST00000516206 101 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 RNU6-970P-201ENST00000516312 107 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 DEFB131E-201ENST00000532329 154 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 AC022254.1-201ENST00000567857 235 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 MIR8074-201ENST00000615081 81 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 Z97988.1-201ENST00000637697 135 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SLC6A11P48066 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLC6A11P48066 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLC6A11P48066 Y_RNA.78-201ENST00000362970 110 ntBASIC1.91□□□□□ -2.1
SLC6A11P48066 Y_RNA.354-201ENST00000365448 111 ntBASIC1.91□□□□□ -2.1
SLC6A11P48066 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
SLC6A11P48066 SNORA18-201ENST00000384416 132 ntBASIC1.91□□□□□ -2.1
SLC6A11P48066 SNORD41-201ENST00000386967 70 ntBASIC1.91□□□□□ -2.1
SLC6A11P48066 RNU6-602P-201ENST00000411155 105 ntBASIC1.91□□□□□ -2.1
SLC6A11P48066 RPS29P11-201ENST00000496507 171 ntBASIC1.91□□□□□ -2.1
SLC6A11P48066 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
SLC6A11P48066 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
SLC6A11P48066 MIR8065-201ENST00000620577 100 ntBASIC1.91□□□□□ -2.1
SLC6A11P48066 RNY3P2-201ENST00000362918 102 ntBASIC1.9□□□□□ -2.11
SLC6A11P48066 Y_RNA.360-201ENST00000365512 102 ntBASIC1.9□□□□□ -2.11
SLC6A11P48066 MIR605-201ENST00000385078 83 ntBASIC1.9□□□□□ -2.11
SLC6A11P48066 AC090844.1-201ENST00000422019 156 ntBASIC1.9□□□□□ -2.11
SLC6A11P48066 AC009474.2-201ENST00000451383 136 ntBASIC1.9□□□□□ -2.11
SLC6A11P48066 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC6A11P48066 Y_RNA.818-201ENST00000618813 71 ntBASIC1.9□□□□□ -2.11
SLC6A11P48066 AC084768.2-201ENST00000622736 221 ntBASIC1.9□□□□□ -2.11
SLC6A11P48066 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SLC6A11P48066 RNA5SP48-201ENST00000363969 126 ntBASIC1.89□□□□□ -2.11
SLC6A11P48066 RNU6-1237P-201ENST00000384777 107 ntBASIC1.89□□□□□ -2.11
SLC6A11P48066 MIR1287-201ENST00000408492 90 ntBASIC1.89□□□□□ -2.11
SLC6A11P48066 AC108667.1-201ENST00000428618 249 ntBASIC1.89□□□□□ -2.11
SLC6A11P48066 RNU6-947P-201ENST00000516264 106 ntBASIC1.89□□□□□ -2.11
SLC6A11P48066 AC015688.6-201ENST00000577737 104 ntBASIC1.89□□□□□ -2.11
SLC6A11P48066 SNORA77B-201ENST00000578179 125 ntBASIC1.89□□□□□ -2.11
SLC6A11P48066 MIR7111-201ENST00000619751 72 ntBASIC1.89□□□□□ -2.11
SLC6A11P48066 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SLC6A11P48066 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
SLC6A11P48066 AL359851.1-201ENST00000569460 4997 ntBASIC1.89□□□□□ -2.11
SLC6A11P48066 RNU6-1131P-201ENST00000364955 107 ntBASIC1.88□□□□□ -2.11
SLC6A11P48066 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
SLC6A11P48066 SNORA25.15-201ENST00000516487 89 ntBASIC1.88□□□□□ -2.11
SLC6A11P48066 RNU6-521P-201ENST00000516663 105 ntBASIC1.88□□□□□ -2.11
SLC6A11P48066 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC6A11P48066 MIR4694-201ENST00000578534 80 ntBASIC1.88□□□□□ -2.11
SLC6A11P48066 AL357312.1-201ENST00000603879 298 ntBASIC1.88□□□□□ -2.11
SLC6A11P48066 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SLC6A11P48066 MIR4679-1-201ENST00000637619 75 ntBASIC1.88□□□□□ -2.11
SLC6A11P48066 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 MIR337-201ENST00000362281 93 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 Y_RNA.107-201ENST00000363190 121 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 RNU6-1099P-201ENST00000363533 107 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 RNA5SP190-201ENST00000365222 118 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 SNORD38B-201ENST00000384690 67 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 MIR577-201ENST00000385196 96 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 RNU6-679P-201ENST00000391003 106 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 RNU6-1086P-201ENST00000410930 100 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 SNORD13-201ENST00000459299 104 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 SCARNA23-201ENST00000516060 130 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 MIR3192-201ENST00000584920 77 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 AL096861.1-201ENST00000610899 123 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 SNORD38B-202ENST00000625943 69 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 AL512310.12-203ENST00000640543 90 ntBASIC1.87□□□□□ -2.11
SLC6A11P48066 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SLC6A11P48066 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
SLC6A11P48066 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SLC6A11P48066 SNORA25.3-201ENST00000363205 127 ntBASIC1.86□□□□□ -2.11
SLC6A11P48066 RNU6-832P-201ENST00000363319 107 ntBASIC1.86□□□□□ -2.11
SLC6A11P48066 HMGN2P38-201ENST00000423806 265 ntBASIC1.86□□□□□ -2.11
SLC6A11P48066 AC005908.1-201ENST00000468701 347 ntBASIC1.86□□□□□ -2.11
SLC6A11P48066 RNA5SP445-201ENST00000515889 115 ntBASIC1.86□□□□□ -2.11
SLC6A11P48066 AC019176.1-201ENST00000518519 225 ntBASIC1.86□□□□□ -2.11
SLC6A11P48066 MIR4781-201ENST00000585250 76 ntBASIC1.86□□□□□ -2.11
SLC6A11P48066 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.86□□□□□ -2.11
SLC6A11P48066 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SLC6A11P48066 Y_RNA.10-201ENST00000362371 110 ntBASIC1.85□□□□□ -2.11
SLC6A11P48066 Y_RNA.369-201ENST00000365568 117 ntBASIC1.85□□□□□ -2.11
SLC6A11P48066 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
SLC6A11P48066 AL353813.1-201ENST00000440700 253 ntBASIC1.85□□□□□ -2.11
SLC6A11P48066 HSPE1P24-201ENST00000450782 238 ntBASIC1.85□□□□□ -2.11
SLC6A11P48066 RNU6-250P-201ENST00000516958 103 ntBASIC1.85□□□□□ -2.11
SLC6A11P48066 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
SLC6A11P48066 snoU13.31-201ENST00000607291 104 ntBASIC1.85□□□□□ -2.11
SLC6A11P48066 GHRLOS.1-201ENST00000610995 70 ntBASIC1.85□□□□□ -2.11
SLC6A11P48066 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
SLC6A11P48066 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
SLC6A11P48066 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SLC6A11P48066 RNA5SP237-201ENST00000410414 113 ntBASIC1.84□□□□□ -2.11
SLC6A11P48066 Y_RNA.601-201ENST00000410500 113 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 228.9 ms