Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CHRNA4P43681 AC062016.1-201ENST00000355719 319 ntBASIC2.59□□□□□ -1.99
CHRNA4P43681 SNORA72.6-201ENST00000384520 129 ntBASIC2.59□□□□□ -1.99
CHRNA4P43681 MIR526A1-201ENST00000384897 85 ntBASIC2.59□□□□□ -1.99
CHRNA4P43681 AC244636.1-201ENST00000421152 228 ntBASIC2.59□□□□□ -1.99
CHRNA4P43681 AC005908.1-201ENST00000468701 347 ntBASIC2.59□□□□□ -1.99
CHRNA4P43681 AC090897.1-201ENST00000580909 226 ntBASIC2.59□□□□□ -1.99
CHRNA4P43681 AC104996.3-201ENST00000590718 94 ntBASIC2.59□□□□□ -1.99
CHRNA4P43681 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.59□□□□□ -1.99
CHRNA4P43681 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CHRNA4P43681 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
CHRNA4P43681 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -2
CHRNA4P43681 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
CHRNA4P43681 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.59□□□□□ -2
CHRNA4P43681 RNU6-461P-201ENST00000364195 107 ntBASIC2.58□□□□□ -2
CHRNA4P43681 RNU6-205P-201ENST00000390858 107 ntBASIC2.58□□□□□ -2
CHRNA4P43681 MIR1261-201ENST00000408659 82 ntBASIC2.58□□□□□ -2
CHRNA4P43681 RNA5SP184-201ENST00000411071 108 ntBASIC2.58□□□□□ -2
CHRNA4P43681 AC092427.1-202ENST00000430569 476 ntBASIC2.58□□□□□ -2
CHRNA4P43681 AC023790.1-201ENST00000482174 347 ntBASIC2.58□□□□□ -2
CHRNA4P43681 RNU6-237P-201ENST00000515985 71 ntBASIC2.58□□□□□ -2
CHRNA4P43681 RNU6-850P-201ENST00000516934 103 ntBASIC2.58□□□□□ -2
CHRNA4P43681 MIR3064-201ENST00000581130 66 ntBASIC2.58□□□□□ -2
CHRNA4P43681 MIR4536-1-201ENST00000583537 88 ntBASIC2.58□□□□□ -2
CHRNA4P43681 AC067747.1-201ENST00000608026 250 ntBASIC2.58□□□□□ -2
CHRNA4P43681 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.58□□□□□ -2
CHRNA4P43681 WWP1P1-201ENST00000466609 2769 ntBASIC2.58□□□□□ -2
CHRNA4P43681 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.57□□□□□ -2
CHRNA4P43681 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.57□□□□□ -2
CHRNA4P43681 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.57□□□□□ -2
CHRNA4P43681 RNA5SP508-201ENST00000411327 119 ntBASIC2.57□□□□□ -2
CHRNA4P43681 AC015818.7-201ENST00000428754 109 ntBASIC2.57□□□□□ -2
CHRNA4P43681 HSPE1P24-201ENST00000450782 238 ntBASIC2.57□□□□□ -2
CHRNA4P43681 CYP3A52P-201ENST00000563326 91 ntBASIC2.57□□□□□ -2
CHRNA4P43681 AC005786.1-201ENST00000588553 154 ntBASIC2.57□□□□□ -2
CHRNA4P43681 AL357312.1-201ENST00000603879 298 ntBASIC2.57□□□□□ -2
CHRNA4P43681 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHRNA4P43681 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CHRNA4P43681 RNU6-132P-201ENST00000383863 107 ntBASIC2.56□□□□□ -2
CHRNA4P43681 RNU6-571P-201ENST00000384128 107 ntBASIC2.56□□□□□ -2
CHRNA4P43681 Y_RNA.491-201ENST00000384417 107 ntBASIC2.56□□□□□ -2
CHRNA4P43681 RNU6-1031P-201ENST00000384773 107 ntBASIC2.56□□□□□ -2
CHRNA4P43681 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.56□□□□□ -2
CHRNA4P43681 RNU6-75P-201ENST00000515944 104 ntBASIC2.56□□□□□ -2
CHRNA4P43681 AC141846.1-201ENST00000568348 142 ntBASIC2.56□□□□□ -2
CHRNA4P43681 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
CHRNA4P43681 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CHRNA4P43681 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHRNA4P43681 Y_RNA.12-201ENST00000362393 112 ntBASIC2.55□□□□□ -2
CHRNA4P43681 RNU4-82P-201ENST00000362443 140 ntBASIC2.55□□□□□ -2
CHRNA4P43681 Y_RNA.36-201ENST00000362602 112 ntBASIC2.55□□□□□ -2
CHRNA4P43681 RNU6-1237P-201ENST00000384777 107 ntBASIC2.55□□□□□ -2
CHRNA4P43681 RNU6-220P-201ENST00000390919 107 ntBASIC2.55□□□□□ -2
CHRNA4P43681 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CHRNA4P43681 HMGN2P35-201ENST00000412164 270 ntBASIC2.55□□□□□ -2
CHRNA4P43681 RPS27P21-201ENST00000486977 252 ntBASIC2.55□□□□□ -2
CHRNA4P43681 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
CHRNA4P43681 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.55□□□□□ -2
CHRNA4P43681 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
CHRNA4P43681 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHRNA4P43681 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CHRNA4P43681 MIR196B-201ENST00000384852 84 ntBASIC2.54□□□□□ -2
CHRNA4P43681 MIR548U-201ENST00000390728 81 ntBASIC2.54□□□□□ -2
CHRNA4P43681 MIR942-201ENST00000401111 86 ntBASIC2.54□□□□□ -2
CHRNA4P43681 YWHAEP2-201ENST00000580066 112 ntBASIC2.54□□□□□ -2
CHRNA4P43681 YWHAEP3-201ENST00000582767 121 ntBASIC2.54□□□□□ -2
CHRNA4P43681 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHRNA4P43681 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
CHRNA4P43681 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.53□□□□□ -2
CHRNA4P43681 Y_RNA.283-201ENST00000364798 112 ntBASIC2.53□□□□□ -2
CHRNA4P43681 RNU6-949P-201ENST00000384040 107 ntBASIC2.53□□□□□ -2
CHRNA4P43681 SNORA8.1-201ENST00000384250 140 ntBASIC2.53□□□□□ -2
CHRNA4P43681 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.53□□□□□ -2
CHRNA4P43681 SNORA74.3-201ENST00000517108 154 ntBASIC2.53□□□□□ -2
CHRNA4P43681 AC138749.4-201ENST00000563970 127 ntBASIC2.53□□□□□ -2
CHRNA4P43681 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
CHRNA4P43681 SNORD92-201ENST00000585078 85 ntBASIC2.53□□□□□ -2
CHRNA4P43681 AL662814.1-201ENST00000617364 121 ntBASIC2.53□□□□□ -2
CHRNA4P43681 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
CHRNA4P43681 Z82195.2-201ENST00000612348 18351 ntBASIC2.52□□□□□ -2.01
CHRNA4P43681 SNORD36A-201ENST00000362874 73 ntBASIC2.52□□□□□ -2.01
CHRNA4P43681 SNORA25.4-201ENST00000363666 124 ntBASIC2.52□□□□□ -2.01
CHRNA4P43681 RNA5SP237-201ENST00000410414 113 ntBASIC2.52□□□□□ -2.01
CHRNA4P43681 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA4P43681 MIR4500-201ENST00000579472 76 ntBASIC2.52□□□□□ -2.01
CHRNA4P43681 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.52□□□□□ -2.01
CHRNA4P43681 AL513423.1-201ENST00000621695 132 ntBASIC2.52□□□□□ -2.01
CHRNA4P43681 AC008133.2-201ENST00000624540 351 ntBASIC2.52□□□□□ -2.01
CHRNA4P43681 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
CHRNA4P43681 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CHRNA4P43681 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHRNA4P43681 RNA5SP393-201ENST00000363423 117 ntBASIC2.51□□□□□ -2.01
CHRNA4P43681 MIR27B-201ENST00000385129 97 ntBASIC2.51□□□□□ -2.01
CHRNA4P43681 RNU6-630P-201ENST00000391258 106 ntBASIC2.51□□□□□ -2.01
CHRNA4P43681 RNU7-43P-201ENST00000516554 64 ntBASIC2.51□□□□□ -2.01
CHRNA4P43681 SCARNA16.3-201ENST00000516595 184 ntBASIC2.51□□□□□ -2.01
CHRNA4P43681 MIR6817-201ENST00000615588 66 ntBASIC2.51□□□□□ -2.01
CHRNA4P43681 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHRNA4P43681 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.51□□□□□ -2.01
CHRNA4P43681 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms