Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR376A2-201ENST00000636782 80 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 SNORA25.1-201ENST00000362326 128 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 SNORA18.1-201ENST00000363418 128 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 RNY3P5-201ENST00000384127 102 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 RNA5SP163-201ENST00000410304 99 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 AC096531.1-201ENST00000419107 107 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 SNORA27.4-201ENST00000516650 95 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 MIR5197-201ENST00000583721 112 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 AP001180.6-201ENST00000584918 159 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 AC037487.3-201ENST00000606668 112 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 AC090574.1-201ENST00000623186 233 ntBASIC-0.38□□□□□ -2.47
RFC3P40938 SNORA22.1-201ENST00000362701 134 ntBASIC-0.39□□□□□ -2.47
RFC3P40938 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.39□□□□□ -2.47
RFC3P40938 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.39□□□□□ -2.47
RFC3P40938 SNORD114-12-201ENST00000365400 75 ntBASIC-0.39□□□□□ -2.47
RFC3P40938 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.39□□□□□ -2.47
RFC3P40938 MIR626-201ENST00000385032 94 ntBASIC-0.39□□□□□ -2.47
RFC3P40938 SNORA53-201ENST00000391141 249 ntBASIC-0.39□□□□□ -2.47
RFC3P40938 RNU6-897P-201ENST00000517135 105 ntBASIC-0.39□□□□□ -2.47
RFC3P40938 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.39□□□□□ -2.47
RFC3P40938 RNY1P13-201ENST00000365030 105 ntBASIC-0.4□□□□□ -2.47
RFC3P40938 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.4□□□□□ -2.47
RFC3P40938 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.4□□□□□ -2.47
RFC3P40938 MIR501-201ENST00000390204 84 ntBASIC-0.4□□□□□ -2.47
RFC3P40938 SNRPGP8-201ENST00000454064 226 ntBASIC-0.4□□□□□ -2.47
RFC3P40938 MIR5706-201ENST00000579841 80 ntBASIC-0.4□□□□□ -2.47
RFC3P40938 MIR4493-201ENST00000584016 73 ntBASIC-0.4□□□□□ -2.47
RFC3P40938 MIR548AD-201ENST00000584780 82 ntBASIC-0.4□□□□□ -2.47
RFC3P40938 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 RNA5SP245-201ENST00000364239 121 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 RNU6-726P-201ENST00000364680 107 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 SNORA18-201ENST00000384416 132 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 MIR106A-201ENST00000384870 81 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 HMGN2P22-201ENST00000427588 175 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 MIR4645-201ENST00000583158 77 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 AL670379.3-201ENST00000605040 251 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 U7.6-201ENST00000610841 64 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 AC021613.1-201ENST00000623880 111 ntBASIC-0.41□□□□□ -2.48
RFC3P40938 RNU4-73P-201ENST00000363164 141 ntBASIC-0.42□□□□□ -2.48
RFC3P40938 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
RFC3P40938 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.42□□□□□ -2.48
RFC3P40938 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.42□□□□□ -2.48
RFC3P40938 AL022718.1-201ENST00000412004 84 ntBASIC-0.42□□□□□ -2.48
RFC3P40938 AL162376.1-201ENST00000624117 175 ntBASIC-0.42□□□□□ -2.48
RFC3P40938 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.43□□□□□ -2.48
RFC3P40938 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.43□□□□□ -2.48
RFC3P40938 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.43□□□□□ -2.48
RFC3P40938 RNA5SP476-201ENST00000516613 103 ntBASIC-0.43□□□□□ -2.48
RFC3P40938 UBE2WP1-201ENST00000362030 340 ntBASIC-0.44□□□□□ -2.48
RFC3P40938 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.44□□□□□ -2.48
RFC3P40938 RNU4-58P-201ENST00000363192 141 ntBASIC-0.44□□□□□ -2.48
RFC3P40938 SNORA63.5-201ENST00000363548 123 ntBASIC-0.44□□□□□ -2.48
RFC3P40938 RNU6-121P-201ENST00000410525 99 ntBASIC-0.44□□□□□ -2.48
RFC3P40938 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.44□□□□□ -2.48
RFC3P40938 RNU6-180P-201ENST00000516697 61 ntBASIC-0.44□□□□□ -2.48
RFC3P40938 MIR3129-201ENST00000581095 76 ntBASIC-0.44□□□□□ -2.48
RFC3P40938 MIR6086-201ENST00000638065 55 ntBASIC-0.44□□□□□ -2.48
RFC3P40938 MIR101-1-201ENST00000362265 75 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 SNORD115-24-201ENST00000363528 82 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 RNU6-46P-201ENST00000383860 107 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 RNU6-211P-201ENST00000384047 107 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 MIR1265-201ENST00000408444 86 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.45□□□□□ -2.48
RFC3P40938 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.45□□□□□ -2.48
RFC3P40938 RNU6-893P-201ENST00000458841 100 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 RNU6-531P-201ENST00000516694 104 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 DEFB131E-201ENST00000532329 154 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 AL360085.1-201ENST00000604713 532 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 SNORA70.25-201ENST00000612741 95 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 MIR548AZ-201ENST00000616567 95 ntBASIC-0.45□□□□□ -2.48
RFC3P40938 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.46□□□□□ -2.48
RFC3P40938 MT-TT-201ENST00000387460 66 ntBASIC-0.46□□□□□ -2.48
RFC3P40938 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
RFC3P40938 MIR548L-201ENST00000408303 86 ntBASIC-0.46□□□□□ -2.48
RFC3P40938 MIR1252-201ENST00000408861 65 ntBASIC-0.46□□□□□ -2.48
RFC3P40938 MTND4P19-201ENST00000446659 478 ntBASIC-0.46□□□□□ -2.48
RFC3P40938 AC244505.6-201ENST00000452829 130 ntBASIC-0.46□□□□□ -2.48
RFC3P40938 RNU2-60P-201ENST00000517290 128 ntBASIC-0.46□□□□□ -2.48
RFC3P40938 AL442067.1-201ENST00000613261 223 ntBASIC-0.46□□□□□ -2.48
RFC3P40938 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.47□□□□□ -2.48
RFC3P40938 SNORA22B-201ENST00000383876 138 ntBASIC-0.47□□□□□ -2.48
RFC3P40938 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.47□□□□□ -2.48
RFC3P40938 MIR196A2-201ENST00000385189 110 ntBASIC-0.47□□□□□ -2.48
RFC3P40938 RNU6-823P-201ENST00000391042 103 ntBASIC-0.47□□□□□ -2.48
RFC3P40938 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.47□□□□□ -2.48
RFC3P40938 MTND4LP11-201ENST00000422184 280 ntBASIC-0.47□□□□□ -2.48
RFC3P40938 RBMX2P4-201ENST00000441256 376 ntBASIC-0.47□□□□□ -2.48
RFC3P40938 RNU7-70P-201ENST00000516941 66 ntBASIC-0.47□□□□□ -2.48
RFC3P40938 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.47□□□□□ -2.48
RFC3P40938 AL365205.2-201ENST00000594586 68 ntBASIC-0.47□□□□□ -2.48
RFC3P40938 MIR101-2-201ENST00000362195 79 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.48□□□□□ -2.49
RFC3P40938 SNORA32.3-201ENST00000384772 121 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms