Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 FO624990.1-201ENST00000636373 85 ntBASIC2.57□□□□□ -2
GPC1P35052 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.57□□□□□ -2
GPC1P35052 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
GPC1P35052 AL365361.1-201ENST00000566942 3481 ntBASIC2.56□□□□□ -2
GPC1P35052 RNU6-360P-201ENST00000390944 104 ntBASIC2.56□□□□□ -2
GPC1P35052 Z98742.3-201ENST00000418637 326 ntBASIC2.56□□□□□ -2
GPC1P35052 COTL1P1-201ENST00000422309 375 ntBASIC2.56□□□□□ -2
GPC1P35052 BX276092.1-201ENST00000427368 251 ntBASIC2.56□□□□□ -2
GPC1P35052 RNU7-85P-201ENST00000458851 63 ntBASIC2.56□□□□□ -2
GPC1P35052 AL512598.1-201ENST00000610158 273 ntBASIC2.56□□□□□ -2
GPC1P35052 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
GPC1P35052 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
GPC1P35052 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
GPC1P35052 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.55□□□□□ -2
GPC1P35052 SNORA80A-201ENST00000363922 136 ntBASIC2.55□□□□□ -2
GPC1P35052 MIR588-201ENST00000384900 83 ntBASIC2.55□□□□□ -2
GPC1P35052 AL138827.1-201ENST00000402666 306 ntBASIC2.55□□□□□ -2
GPC1P35052 SNORA11.2-201ENST00000408318 127 ntBASIC2.55□□□□□ -2
GPC1P35052 SNRPGP12-201ENST00000449481 213 ntBASIC2.55□□□□□ -2
GPC1P35052 AC004223.1-201ENST00000479840 271 ntBASIC2.55□□□□□ -2
GPC1P35052 SNORD111.1-201ENST00000516421 86 ntBASIC2.55□□□□□ -2
GPC1P35052 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
GPC1P35052 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
GPC1P35052 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
GPC1P35052 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
GPC1P35052 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
GPC1P35052 MIR6852-201ENST00000621699 66 ntBASIC2.55□□□□□ -2
GPC1P35052 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
GPC1P35052 AL137790.1-201ENST00000634283 177 ntBASIC2.55□□□□□ -2
GPC1P35052 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.55□□□□□ -2
GPC1P35052 RNA5SP259-201ENST00000365541 109 ntBASIC2.54□□□□□ -2
GPC1P35052 AC244023.1-201ENST00000426884 112 ntBASIC2.54□□□□□ -2
GPC1P35052 snoU13.2-201ENST00000459201 104 ntBASIC2.54□□□□□ -2
GPC1P35052 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.54□□□□□ -2
GPC1P35052 MIR4796-201ENST00000580742 81 ntBASIC2.54□□□□□ -2
GPC1P35052 MIR4635-201ENST00000583759 79 ntBASIC2.54□□□□□ -2
GPC1P35052 AC242498.1-201ENST00000604134 111 ntBASIC2.54□□□□□ -2
GPC1P35052 Y_RNA.788-201ENST00000622394 112 ntBASIC2.54□□□□□ -2
GPC1P35052 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
GPC1P35052 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
GPC1P35052 RNU6-624P-201ENST00000363411 107 ntBASIC2.53□□□□□ -2
GPC1P35052 SNORA72.6-201ENST00000384520 129 ntBASIC2.53□□□□□ -2
GPC1P35052 AC004965.1-201ENST00000413033 213 ntBASIC2.53□□□□□ -2
GPC1P35052 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.53□□□□□ -2
GPC1P35052 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
GPC1P35052 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.52□□□□□ -2.01
GPC1P35052 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
GPC1P35052 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
GPC1P35052 Y_RNA.119-201ENST00000363301 96 ntBASIC2.52□□□□□ -2.01
GPC1P35052 RNA5SP48-201ENST00000363969 126 ntBASIC2.52□□□□□ -2.01
GPC1P35052 RNU1-52P-201ENST00000384190 164 ntBASIC2.52□□□□□ -2.01
GPC1P35052 Y_RNA.510-201ENST00000384511 114 ntBASIC2.52□□□□□ -2.01
GPC1P35052 RNU6-380P-201ENST00000410207 107 ntBASIC2.52□□□□□ -2.01
GPC1P35052 RNA5SP21-201ENST00000410917 96 ntBASIC2.52□□□□□ -2.01
GPC1P35052 Y_RNA.648-201ENST00000459455 110 ntBASIC2.52□□□□□ -2.01
GPC1P35052 PRELID3BP2-201ENST00000605362 201 ntBASIC2.52□□□□□ -2.01
GPC1P35052 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
GPC1P35052 RNU6-161P-201ENST00000363051 106 ntBASIC2.51□□□□□ -2.01
GPC1P35052 RNU1-112P-201ENST00000364401 164 ntBASIC2.51□□□□□ -2.01
GPC1P35052 MIR653-201ENST00000385279 96 ntBASIC2.51□□□□□ -2.01
GPC1P35052 RNA5SP450-201ENST00000411206 102 ntBASIC2.51□□□□□ -2.01
GPC1P35052 AC114801.3-201ENST00000510231 177 ntBASIC2.51□□□□□ -2.01
GPC1P35052 AC079600.2-201ENST00000550076 130 ntBASIC2.51□□□□□ -2.01
GPC1P35052 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.51□□□□□ -2.01
GPC1P35052 AL049779.4-201ENST00000604500 156 ntBASIC2.51□□□□□ -2.01
GPC1P35052 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
GPC1P35052 RNU6-571P-201ENST00000384128 107 ntBASIC2.5□□□□□ -2.01
GPC1P35052 RNA5SP210-201ENST00000391034 120 ntBASIC2.5□□□□□ -2.01
GPC1P35052 RNU6-1108P-201ENST00000516308 104 ntBASIC2.5□□□□□ -2.01
GPC1P35052 RNU6-922P-201ENST00000516753 99 ntBASIC2.5□□□□□ -2.01
GPC1P35052 MIR4536-1-201ENST00000583537 88 ntBASIC2.5□□□□□ -2.01
GPC1P35052 SNORA4-201ENST00000584302 138 ntBASIC2.5□□□□□ -2.01
GPC1P35052 WWP1P1-201ENST00000466609 2769 ntBASIC2.49□□□□□ -2.01
GPC1P35052 SNORA63.2-201ENST00000362603 126 ntBASIC2.49□□□□□ -2.01
GPC1P35052 RNU6-686P-201ENST00000364839 107 ntBASIC2.49□□□□□ -2.01
GPC1P35052 RNU6-811P-201ENST00000384069 107 ntBASIC2.49□□□□□ -2.01
GPC1P35052 MIR513A1-201ENST00000385138 129 ntBASIC2.49□□□□□ -2.01
GPC1P35052 UBE2DNL-203ENST00000474922 222 ntBASIC2.49□□□□□ -2.01
GPC1P35052 RPL23AP94-201ENST00000512518 302 ntBASIC2.49□□□□□ -2.01
GPC1P35052 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.49□□□□□ -2.01
GPC1P35052 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.49□□□□□ -2.01
GPC1P35052 AL096861.1-201ENST00000610899 123 ntBASIC2.49□□□□□ -2.01
GPC1P35052 MIR7106-201ENST00000612419 65 ntBASIC2.49□□□□□ -2.01
GPC1P35052 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.49□□□□□ -2.01
GPC1P35052 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
GPC1P35052 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
GPC1P35052 SNORA25.3-201ENST00000363205 127 ntBASIC2.48□□□□□ -2.01
GPC1P35052 RNA5SP292-201ENST00000390974 118 ntBASIC2.48□□□□□ -2.01
GPC1P35052 SCARNA18B-201ENST00000458806 135 ntBASIC2.48□□□□□ -2.01
GPC1P35052 MIR3134-201ENST00000579433 74 ntBASIC2.48□□□□□ -2.01
GPC1P35052 MIR3192-201ENST00000584920 77 ntBASIC2.48□□□□□ -2.01
GPC1P35052 MIR6740-201ENST00000618268 113 ntBASIC2.48□□□□□ -2.01
GPC1P35052 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.48□□□□□ -2.01
GPC1P35052 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.48□□□□□ -2.01
GPC1P35052 MIRLET7A1-201ENST00000362295 80 ntBASIC2.47□□□□□ -2.01
GPC1P35052 SNORA5B-201ENST00000363786 132 ntBASIC2.47□□□□□ -2.01
GPC1P35052 SNORA25.9-201ENST00000365087 128 ntBASIC2.47□□□□□ -2.01
GPC1P35052 RNU6-396P-201ENST00000365369 105 ntBASIC2.47□□□□□ -2.01
GPC1P35052 DEFA7P-201ENST00000382676 285 ntBASIC2.47□□□□□ -2.01
GPC1P35052 MIR516A2-201ENST00000384888 90 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms