Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RNU6-747P-201ENST00000390928 104 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 RNU6-241P-201ENST00000391148 104 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 RNU6-177P-201ENST00000411257 104 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 AC004941.2-201ENST00000427009 228 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 AC015818.7-201ENST00000428754 109 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 AC087499.7-201ENST00000441958 109 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 MIR18B-201ENST00000454574 71 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 snoU13.2-201ENST00000459201 104 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 MIR3658-201ENST00000636291 56 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 AC023934.1-201ENST00000574529 2389 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 Y_RNA.150-201ENST00000363562 102 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 RNU4-84P-201ENST00000364200 139 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 Y_RNA.357-201ENST00000365487 109 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 Y_RNA.393-201ENST00000383936 102 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 MIR605-201ENST00000385078 83 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 SNORD99-201ENST00000408612 74 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 RNU6-588P-201ENST00000410281 105 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 RPS26P5-201ENST00000418544 335 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 AC108059.2-201ENST00000434626 151 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 Y_RNA.662-201ENST00000516028 97 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 Y_RNA.700-201ENST00000516806 100 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 RNU6-794P-201ENST00000517261 64 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 MIR151B-201ENST00000584249 96 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 uc_338.6-201ENST00000613544 171 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 MIR6740-201ENST00000618268 113 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 AL596211.1-201ENST00000569873 2277 ntBASIC0.75□□□□□ -2.29
PTPN3P26045 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
PTPN3P26045 MIR520E-201ENST00000384867 87 ntBASIC0.74□□□□□ -2.29
PTPN3P26045 RNU6-239P-201ENST00000390990 99 ntBASIC0.74□□□□□ -2.29
PTPN3P26045 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.74□□□□□ -2.29
PTPN3P26045 RNU6-1135P-201ENST00000411083 103 ntBASIC0.74□□□□□ -2.29
PTPN3P26045 AC107027.2-201ENST00000512197 115 ntBASIC0.74□□□□□ -2.29
PTPN3P26045 RNU6-1149P-201ENST00000516810 97 ntBASIC0.74□□□□□ -2.29
PTPN3P26045 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.74□□□□□ -2.29
PTPN3P26045 MIR6841-201ENST00000637129 72 ntBASIC0.74□□□□□ -2.29
PTPN3P26045 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
PTPN3P26045 RNU6-934P-201ENST00000365154 107 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 Y_RNA.337-201ENST00000365312 102 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 Y_RNA.441-201ENST00000384123 112 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 MIR489-201ENST00000384923 84 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 SNORD105-201ENST00000386910 85 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 MT-TF-201ENST00000387314 71 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 RNU6-1165P-201ENST00000410119 107 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 RNU7-121P-201ENST00000516604 62 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 RNU6-182P-201ENST00000516970 105 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 RNU6-1223P-201ENST00000517124 104 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 MIR3152-201ENST00000579801 74 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 RMST_2.1-201ENST00000617263 136 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 MIR6844-201ENST00000637122 62 ntBASIC0.73□□□□□ -2.29
PTPN3P26045 Y_RNA.272-201ENST00000364696 102 ntBASIC0.72□□□□□ -2.29
PTPN3P26045 RNU1-133P-201ENST00000364867 167 ntBASIC0.72□□□□□ -2.29
PTPN3P26045 MIR588-201ENST00000384900 83 ntBASIC0.72□□□□□ -2.29
PTPN3P26045 PCNPP3-201ENST00000393579 471 ntBASIC0.72□□□□□ -2.29
PTPN3P26045 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
PTPN3P26045 RPS29P1-201ENST00000465274 159 ntBASIC0.72□□□□□ -2.29
PTPN3P26045 MIR6788-201ENST00000618842 66 ntBASIC0.72□□□□□ -2.29
PTPN3P26045 Y_RNA.8-201ENST00000362353 102 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 Y_RNA.52-201ENST00000362760 96 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 RNU6-508P-201ENST00000363231 103 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 RNU6-1130P-201ENST00000365434 107 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 Y_RNA.497-201ENST00000384447 98 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 MIR613-201ENST00000385248 95 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 SNORD83.1-201ENST00000411362 77 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 RNU7-70P-201ENST00000516941 66 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 FTX_2.1-201ENST00000618816 94 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 AC021613.1-201ENST00000623880 111 ntBASIC0.71□□□□□ -2.3
PTPN3P26045 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
PTPN3P26045 RNU6-804P-201ENST00000384286 107 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 RNU6-886P-201ENST00000384319 105 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 SNORA20-201ENST00000384662 132 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 SNORD12C-201ENST00000386307 89 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 RNU6-394P-201ENST00000410735 107 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 COX6CP6-201ENST00000490840 228 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 RNU6-977P-201ENST00000516411 103 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 MIR4771-2-201ENST00000577758 74 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 MIR3646-201ENST00000578301 84 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 MIR4771-1-201ENST00000582617 74 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 DNAJC19P2-201ENST00000593340 302 ntBASIC0.7□□□□□ -2.3
PTPN3P26045 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.7□□□□□ -2.3
PTPN3P26045 MIR30D-201ENST00000362283 70 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 Y_RNA.270-201ENST00000364693 104 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 RNU4-16P-201ENST00000364737 141 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 SNORD37.2-201ENST00000391075 66 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 AC244098.3-201ENST00000424803 96 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 RNU6-893P-201ENST00000458841 100 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 RNA5SP236-201ENST00000516169 116 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 RNU2-60P-201ENST00000517290 128 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 AC011195.1-201ENST00000578177 177 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 MIR4804-201ENST00000581683 73 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 MIR4676-201ENST00000583078 72 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 AC010332.2-201ENST00000613083 1904 ntBASIC0.69□□□□□ -2.3
PTPN3P26045 RNU6-151P-201ENST00000364158 107 ntBASIC0.68□□□□□ -2.3
PTPN3P26045 RNU4-11P-201ENST00000365287 132 ntBASIC0.68□□□□□ -2.3
PTPN3P26045 RNU6-907P-201ENST00000390924 102 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms