Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-1296P-201ENST00000383879 107 ntBASIC2.45□□□□□ -2.02
NFKB1P19838 RNU6-203P-201ENST00000384038 104 ntBASIC2.45□□□□□ -2.02
NFKB1P19838 RNU6-24P-201ENST00000384440 107 ntBASIC2.45□□□□□ -2.02
NFKB1P19838 SNORD38B-201ENST00000384690 67 ntBASIC2.45□□□□□ -2.02
NFKB1P19838 MIR194-1-201ENST00000384892 85 ntBASIC2.45□□□□□ -2.02
NFKB1P19838 AC019129.1-201ENST00000403786 261 ntBASIC2.45□□□□□ -2.02
NFKB1P19838 RNA5SP181-201ENST00000410246 98 ntBASIC2.45□□□□□ -2.02
NFKB1P19838 Y_RNA.607-201ENST00000410597 98 ntBASIC2.45□□□□□ -2.02
NFKB1P19838 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.45□□□□□ -2.02
NFKB1P19838 AP001362.1-201ENST00000625165 124 ntBASIC2.45□□□□□ -2.02
NFKB1P19838 SNORD38B-202ENST00000625943 69 ntBASIC2.45□□□□□ -2.02
NFKB1P19838 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
NFKB1P19838 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NFKB1P19838 RNY1P13-201ENST00000365030 105 ntBASIC2.44□□□□□ -2.02
NFKB1P19838 AL161932.1-201ENST00000437408 146 ntBASIC2.44□□□□□ -2.02
NFKB1P19838 RNU1-98P-201ENST00000458992 160 ntBASIC2.44□□□□□ -2.02
NFKB1P19838 RNU6-322P-201ENST00000516010 103 ntBASIC2.44□□□□□ -2.02
NFKB1P19838 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.44□□□□□ -2.02
NFKB1P19838 MIR3935-201ENST00000583472 104 ntBASIC2.44□□□□□ -2.02
NFKB1P19838 AC012676.2-201ENST00000619258 186 ntBASIC2.44□□□□□ -2.02
NFKB1P19838 SNORA67.1-201ENST00000364749 141 ntBASIC2.43□□□□□ -2.02
NFKB1P19838 RNA5SP138-201ENST00000365098 114 ntBASIC2.43□□□□□ -2.02
NFKB1P19838 RNU6-1237P-201ENST00000384777 107 ntBASIC2.43□□□□□ -2.02
NFKB1P19838 AC026436.1-201ENST00000510537 270 ntBASIC2.43□□□□□ -2.02
NFKB1P19838 RNU7-41P-201ENST00000515917 61 ntBASIC2.43□□□□□ -2.02
NFKB1P19838 AC019288.1-201ENST00000557918 224 ntBASIC2.43□□□□□ -2.02
NFKB1P19838 MIR4529-201ENST00000578110 78 ntBASIC2.43□□□□□ -2.02
NFKB1P19838 AC067747.1-201ENST00000608026 250 ntBASIC2.43□□□□□ -2.02
NFKB1P19838 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.43□□□□□ -2.02
NFKB1P19838 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.43□□□□□ -2.02
NFKB1P19838 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
NFKB1P19838 SNORA3A-201ENST00000364113 130 ntBASIC2.42□□□□□ -2.02
NFKB1P19838 RNU6-652P-201ENST00000365488 107 ntBASIC2.42□□□□□ -2.02
NFKB1P19838 RNU6-613P-201ENST00000410412 108 ntBASIC2.42□□□□□ -2.02
NFKB1P19838 AC004965.1-201ENST00000413033 213 ntBASIC2.42□□□□□ -2.02
NFKB1P19838 AC141846.1-201ENST00000568348 142 ntBASIC2.42□□□□□ -2.02
NFKB1P19838 DEFB122-202ENST00000569013 197 ntBASIC2.42□□□□□ -2.02
NFKB1P19838 AL513043.2-201ENST00000573941 143 ntBASIC2.42□□□□□ -2.02
NFKB1P19838 MIR1291-201ENST00000627649 87 ntBASIC2.42□□□□□ -2.02
NFKB1P19838 AC016717.2-201ENST00000609089 5141 ntBASIC2.42□□□□□ -2.02
NFKB1P19838 RNA5SP237-201ENST00000410414 113 ntBASIC2.41□□□□□ -2.02
NFKB1P19838 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.41□□□□□ -2.02
NFKB1P19838 RNA5SP82-201ENST00000516707 92 ntBASIC2.41□□□□□ -2.02
NFKB1P19838 MTND5P40-201ENST00000559945 246 ntBASIC2.41□□□□□ -2.02
NFKB1P19838 AC020891.4-201ENST00000605745 93 ntBASIC2.41□□□□□ -2.02
NFKB1P19838 HSBP1P2-201ENST00000299671 229 ntBASIC2.4□□□□□ -2.03
NFKB1P19838 SNORD115-27-201ENST00000364430 82 ntBASIC2.4□□□□□ -2.03
NFKB1P19838 AC009474.2-201ENST00000451383 136 ntBASIC2.4□□□□□ -2.03
NFKB1P19838 MIR3162-201ENST00000581818 82 ntBASIC2.4□□□□□ -2.03
NFKB1P19838 AC046143.2-201ENST00000609789 160 ntBASIC2.4□□□□□ -2.03
NFKB1P19838 AL137847.3-201ENST00000611521 109 ntBASIC2.4□□□□□ -2.03
NFKB1P19838 AL662814.1-201ENST00000617364 121 ntBASIC2.4□□□□□ -2.03
NFKB1P19838 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NFKB1P19838 RNA5SP48-201ENST00000363969 126 ntBASIC2.39□□□□□ -2.03
NFKB1P19838 SNORD114-30-201ENST00000364448 72 ntBASIC2.39□□□□□ -2.03
NFKB1P19838 Y_RNA.316-201ENST00000365118 111 ntBASIC2.39□□□□□ -2.03
NFKB1P19838 RNU1-52P-201ENST00000384190 164 ntBASIC2.39□□□□□ -2.03
NFKB1P19838 RNU6-480P-201ENST00000384332 107 ntBASIC2.39□□□□□ -2.03
NFKB1P19838 SNORA2B-201ENST00000384583 137 ntBASIC2.39□□□□□ -2.03
NFKB1P19838 MIR181B2-201ENST00000385004 89 ntBASIC2.39□□□□□ -2.03
NFKB1P19838 AL161935.2-201ENST00000414627 60 ntBASIC2.39□□□□□ -2.03
NFKB1P19838 SNORD111.1-201ENST00000516421 86 ntBASIC2.39□□□□□ -2.03
NFKB1P19838 RNU7-193P-201ENST00000516723 65 ntBASIC2.39□□□□□ -2.03
NFKB1P19838 MIR524-201ENST00000385242 87 ntBASIC2.38□□□□□ -2.03
NFKB1P19838 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
NFKB1P19838 AC133485.1-201ENST00000567176 124 ntBASIC2.38□□□□□ -2.03
NFKB1P19838 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.38□□□□□ -2.03
NFKB1P19838 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.38□□□□□ -2.03
NFKB1P19838 MIR3945-201ENST00000581853 98 ntBASIC2.38□□□□□ -2.03
NFKB1P19838 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NFKB1P19838 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
NFKB1P19838 RNY1P2-201ENST00000364820 117 ntBASIC2.37□□□□□ -2.03
NFKB1P19838 RNA5SP508-201ENST00000411327 119 ntBASIC2.37□□□□□ -2.03
NFKB1P19838 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.37□□□□□ -2.03
NFKB1P19838 AL513328.1-201ENST00000446460 224 ntBASIC2.37□□□□□ -2.03
NFKB1P19838 RNA5SP445-201ENST00000515889 115 ntBASIC2.37□□□□□ -2.03
NFKB1P19838 MIR4435-1-201ENST00000582552 80 ntBASIC2.37□□□□□ -2.03
NFKB1P19838 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NFKB1P19838 RNU4-82P-201ENST00000362443 140 ntBASIC2.36□□□□□ -2.03
NFKB1P19838 RNU6-949P-201ENST00000384040 107 ntBASIC2.36□□□□□ -2.03
NFKB1P19838 RNU6-524P-201ENST00000384270 107 ntBASIC2.36□□□□□ -2.03
NFKB1P19838 MIR519C-201ENST00000385053 87 ntBASIC2.36□□□□□ -2.03
NFKB1P19838 AC027119.1-201ENST00000440877 241 ntBASIC2.36□□□□□ -2.03
NFKB1P19838 RPS29P11-201ENST00000496507 171 ntBASIC2.36□□□□□ -2.03
NFKB1P19838 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.36□□□□□ -2.03
NFKB1P19838 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NFKB1P19838 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NFKB1P19838 RNA5SP133-201ENST00000363368 119 ntBASIC2.35□□□□□ -2.03
NFKB1P19838 MIR144-201ENST00000384886 86 ntBASIC2.35□□□□□ -2.03
NFKB1P19838 MIR513A1-201ENST00000385138 129 ntBASIC2.35□□□□□ -2.03
NFKB1P19838 SNORD41-201ENST00000386967 70 ntBASIC2.35□□□□□ -2.03
NFKB1P19838 AC244023.1-201ENST00000426884 112 ntBASIC2.35□□□□□ -2.03
NFKB1P19838 snoU13.2-201ENST00000459201 104 ntBASIC2.35□□□□□ -2.03
NFKB1P19838 SNORA31.11-201ENST00000516528 139 ntBASIC2.35□□□□□ -2.03
NFKB1P19838 AC242498.1-201ENST00000604134 111 ntBASIC2.35□□□□□ -2.03
NFKB1P19838 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.35□□□□□ -2.03
NFKB1P19838 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
NFKB1P19838 MIR4662A-201ENST00000637499 67 ntBASIC2.35□□□□□ -2.03
NFKB1P19838 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
NFKB1P19838 RNA5SP289-201ENST00000362332 137 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms