Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AP001328.1-201ENST00000528550 176 ntBASIC1.19□□□□□ -2.22
MMP3P08254 AC108081.1-201ENST00000604358 221 ntBASIC1.19□□□□□ -2.22
MMP3P08254 MIR8055-201ENST00000610739 97 ntBASIC1.19□□□□□ -2.22
MMP3P08254 AC021613.1-201ENST00000623880 111 ntBASIC1.19□□□□□ -2.22
MMP3P08254 AC010332.2-201ENST00000613083 1904 ntBASIC1.19□□□□□ -2.22
MMP3P08254 Y_RNA.343-201ENST00000365354 112 ntBASIC1.18□□□□□ -2.22
MMP3P08254 Y_RNA.568-201ENST00000384742 113 ntBASIC1.18□□□□□ -2.22
MMP3P08254 RNU6-257P-201ENST00000410238 98 ntBASIC1.18□□□□□ -2.22
MMP3P08254 MTATP6P21-201ENST00000440681 189 ntBASIC1.18□□□□□ -2.22
MMP3P08254 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
MMP3P08254 AC023827.1-201ENST00000569247 97 ntBASIC1.18□□□□□ -2.22
MMP3P08254 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
MMP3P08254 MIR6717-201ENST00000622747 73 ntBASIC1.18□□□□□ -2.22
MMP3P08254 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
MMP3P08254 RNU6-349P-201ENST00000362402 107 ntBASIC1.17□□□□□ -2.22
MMP3P08254 RNU6-746P-201ENST00000384112 109 ntBASIC1.17□□□□□ -2.22
MMP3P08254 AL603914.1-201ENST00000401964 204 ntBASIC1.17□□□□□ -2.22
MMP3P08254 RNU6-602P-201ENST00000411155 105 ntBASIC1.17□□□□□ -2.22
MMP3P08254 MTND4LP9-201ENST00000427694 174 ntBASIC1.17□□□□□ -2.22
MMP3P08254 SNORD79.1-201ENST00000516069 84 ntBASIC1.17□□□□□ -2.22
MMP3P08254 Z97988.1-201ENST00000637697 135 ntBASIC1.17□□□□□ -2.22
MMP3P08254 AC008163.1-202ENST00000636004 2889 ntBASIC1.17□□□□□ -2.22
MMP3P08254 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MMP3P08254 Y_RNA.36-201ENST00000362602 112 ntBASIC1.16□□□□□ -2.22
MMP3P08254 RNU6-396P-201ENST00000365369 105 ntBASIC1.16□□□□□ -2.22
MMP3P08254 Y_RNA.366-201ENST00000365540 102 ntBASIC1.16□□□□□ -2.22
MMP3P08254 SNORA25-201ENST00000384384 134 ntBASIC1.16□□□□□ -2.22
MMP3P08254 SNORD12C-201ENST00000386307 89 ntBASIC1.16□□□□□ -2.22
MMP3P08254 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.16□□□□□ -2.22
MMP3P08254 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.16□□□□□ -2.22
MMP3P08254 SEPT14P17-201ENST00000617978 177 ntBASIC1.16□□□□□ -2.22
MMP3P08254 Y_RNA.171-201ENST00000363760 102 ntBASIC1.15□□□□□ -2.23
MMP3P08254 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
MMP3P08254 RPS3AP1-201ENST00000413190 320 ntBASIC1.15□□□□□ -2.23
MMP3P08254 AC244023.1-201ENST00000426884 112 ntBASIC1.15□□□□□ -2.23
MMP3P08254 RNU7-21P-201ENST00000459430 62 ntBASIC1.15□□□□□ -2.23
MMP3P08254 MIR2115-201ENST00000516657 100 ntBASIC1.15□□□□□ -2.23
MMP3P08254 RNU6-1258P-201ENST00000516911 111 ntBASIC1.15□□□□□ -2.23
MMP3P08254 AC242498.1-201ENST00000604134 111 ntBASIC1.15□□□□□ -2.23
MMP3P08254 AC011603.4-201ENST00000611325 277 ntBASIC1.15□□□□□ -2.23
MMP3P08254 MIR373-201ENST00000362273 69 ntBASIC1.14□□□□□ -2.23
MMP3P08254 SNORA22.1-201ENST00000362701 134 ntBASIC1.14□□□□□ -2.23
MMP3P08254 RNU4-38P-201ENST00000364472 129 ntBASIC1.14□□□□□ -2.23
MMP3P08254 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
MMP3P08254 SNORA80D-201ENST00000384488 135 ntBASIC1.14□□□□□ -2.23
MMP3P08254 RNU6-1319P-201ENST00000390855 104 ntBASIC1.14□□□□□ -2.23
MMP3P08254 RNU6-747P-201ENST00000390928 104 ntBASIC1.14□□□□□ -2.23
MMP3P08254 RNU6-241P-201ENST00000391148 104 ntBASIC1.14□□□□□ -2.23
MMP3P08254 RNU6-177P-201ENST00000411257 104 ntBASIC1.14□□□□□ -2.23
MMP3P08254 Y_RNA.692-201ENST00000516627 105 ntBASIC1.14□□□□□ -2.23
MMP3P08254 AC133485.4-201ENST00000561835 220 ntBASIC1.14□□□□□ -2.23
MMP3P08254 AC138907.4-201ENST00000570107 226 ntBASIC1.14□□□□□ -2.23
MMP3P08254 AP001340.1-201ENST00000624405 217 ntBASIC1.14□□□□□ -2.23
MMP3P08254 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
MMP3P08254 RNU6-235P-201ENST00000362644 107 ntBASIC1.13□□□□□ -2.23
MMP3P08254 Y_RNA.114-201ENST00000363265 113 ntBASIC1.13□□□□□ -2.23
MMP3P08254 RNA5SP325-201ENST00000363756 130 ntBASIC1.13□□□□□ -2.23
MMP3P08254 SNORA2B-201ENST00000384583 137 ntBASIC1.13□□□□□ -2.23
MMP3P08254 SNORD38B-201ENST00000384690 67 ntBASIC1.13□□□□□ -2.23
MMP3P08254 SNORA40-201ENST00000388090 126 ntBASIC1.13□□□□□ -2.23
MMP3P08254 RNA5SP144-201ENST00000410846 116 ntBASIC1.13□□□□□ -2.23
MMP3P08254 POLR2J4-204ENST00000418424 324 ntBASIC1.13□□□□□ -2.23
MMP3P08254 snoU13.21-201ENST00000459368 105 ntBASIC1.13□□□□□ -2.23
MMP3P08254 RNU6-971P-201ENST00000516920 106 ntBASIC1.13□□□□□ -2.23
MMP3P08254 MIR3121-201ENST00000579680 77 ntBASIC1.13□□□□□ -2.23
MMP3P08254 AC021443.1-201ENST00000604478 211 ntBASIC1.13□□□□□ -2.23
MMP3P08254 AC211469.2-201ENST00000605461 205 ntBASIC1.13□□□□□ -2.23
MMP3P08254 RNU6-94P-201ENST00000607728 107 ntBASIC1.13□□□□□ -2.23
MMP3P08254 uc_338.6-201ENST00000613544 171 ntBASIC1.13□□□□□ -2.23
MMP3P08254 MIR6740-201ENST00000618268 113 ntBASIC1.13□□□□□ -2.23
MMP3P08254 SNORD38B-202ENST00000625943 69 ntBASIC1.13□□□□□ -2.23
MMP3P08254 MIR6841-201ENST00000637129 72 ntBASIC1.13□□□□□ -2.23
MMP3P08254 RNU6-1237P-201ENST00000384777 107 ntBASIC1.12□□□□□ -2.23
MMP3P08254 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
MMP3P08254 RNU6-613P-201ENST00000410412 108 ntBASIC1.12□□□□□ -2.23
MMP3P08254 AC063976.4-201ENST00000421971 163 ntBASIC1.12□□□□□ -2.23
MMP3P08254 AC015818.7-201ENST00000428754 109 ntBASIC1.12□□□□□ -2.23
MMP3P08254 AC002429.1-201ENST00000437672 148 ntBASIC1.12□□□□□ -2.23
MMP3P08254 AC087499.7-201ENST00000441958 109 ntBASIC1.12□□□□□ -2.23
MMP3P08254 RNU6-1211P-201ENST00000459179 105 ntBASIC1.12□□□□□ -2.23
MMP3P08254 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
MMP3P08254 RNU2-35P-201ENST00000516446 142 ntBASIC1.12□□□□□ -2.23
MMP3P08254 Y_RNA.757-201ENST00000578934 114 ntBASIC1.12□□□□□ -2.23
MMP3P08254 AP000753.3-201ENST00000604083 169 ntBASIC1.12□□□□□ -2.23
MMP3P08254 U7.2-201ENST00000607576 63 ntBASIC1.12□□□□□ -2.23
MMP3P08254 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
MMP3P08254 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
MMP3P08254 Y_RNA.586-201ENST00000391146 98 ntBASIC1.11□□□□□ -2.23
MMP3P08254 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.11□□□□□ -2.23
MMP3P08254 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
MMP3P08254 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
MMP3P08254 AL512326.2-201ENST00000426359 151 ntBASIC1.11□□□□□ -2.23
MMP3P08254 RNU7-164P-201ENST00000459221 62 ntBASIC1.11□□□□□ -2.23
MMP3P08254 RNA5SP436-201ENST00000516020 115 ntBASIC1.11□□□□□ -2.23
MMP3P08254 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
MMP3P08254 IGKV1-22-201ENST00000524313 326 ntBASIC1.11□□□□□ -2.23
MMP3P08254 AC036111.3-201ENST00000526389 112 ntBASIC1.11□□□□□ -2.23
MMP3P08254 MIR3152-201ENST00000579801 74 ntBASIC1.11□□□□□ -2.23
MMP3P08254 MIR4305-201ENST00000583252 102 ntBASIC1.11□□□□□ -2.23
MMP3P08254 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 387.5 ms