Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AC022254.1-201ENST00000567857 235 ntBASIC2.06□□□□□ -2.08
SYPP08247 MIR6845-201ENST00000613182 61 ntBASIC2.06□□□□□ -2.08
SYPP08247 AC012531.4-201ENST00000616509 177 ntBASIC2.06□□□□□ -2.08
SYPP08247 MIR4251-201ENST00000635819 61 ntBASIC2.06□□□□□ -2.08
SYPP08247 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
SYPP08247 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYPP08247 Y_RNA.4-201ENST00000362333 112 ntBASIC2.05□□□□□ -2.08
SYPP08247 RNU6-170P-201ENST00000362832 104 ntBASIC2.05□□□□□ -2.08
SYPP08247 RNU1-17P-201ENST00000363022 152 ntBASIC2.05□□□□□ -2.08
SYPP08247 Y_RNA.164-201ENST00000363709 102 ntBASIC2.05□□□□□ -2.08
SYPP08247 RNA5SP259-201ENST00000365541 109 ntBASIC2.05□□□□□ -2.08
SYPP08247 SNORA18-201ENST00000384416 132 ntBASIC2.05□□□□□ -2.08
SYPP08247 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SYPP08247 AL451046.2-201ENST00000403074 277 ntBASIC2.05□□□□□ -2.08
SYPP08247 AC090844.1-201ENST00000422019 156 ntBASIC2.05□□□□□ -2.08
SYPP08247 AC004941.2-201ENST00000427009 228 ntBASIC2.05□□□□□ -2.08
SYPP08247 RNU6-795P-201ENST00000516323 103 ntBASIC2.05□□□□□ -2.08
SYPP08247 MIR6840-201ENST00000611937 71 ntBASIC2.05□□□□□ -2.08
SYPP08247 AL773524.1-201ENST00000614065 229 ntBASIC2.05□□□□□ -2.08
SYPP08247 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
SYPP08247 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SYPP08247 AL596028.1-201ENST00000326971 197 ntBASIC2.04□□□□□ -2.08
SYPP08247 RNU6-1313P-201ENST00000362622 102 ntBASIC2.04□□□□□ -2.08
SYPP08247 SNORD115-35-201ENST00000365122 82 ntBASIC2.04□□□□□ -2.08
SYPP08247 SNORD41-201ENST00000386967 70 ntBASIC2.04□□□□□ -2.08
SYPP08247 AC244636.1-201ENST00000421152 228 ntBASIC2.04□□□□□ -2.08
SYPP08247 RNU6-762P-201ENST00000517107 102 ntBASIC2.04□□□□□ -2.08
SYPP08247 CYP3A52P-201ENST00000563326 91 ntBASIC2.04□□□□□ -2.08
SYPP08247 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYPP08247 AC104435.1-201ENST00000483483 166 ntBASIC2.03□□□□□ -2.08
SYPP08247 RNU7-61P-201ENST00000515897 61 ntBASIC2.03□□□□□ -2.08
SYPP08247 RNU6-1053P-201ENST00000515930 101 ntBASIC2.03□□□□□ -2.08
SYPP08247 RNU7-2P-201ENST00000516096 62 ntBASIC2.03□□□□□ -2.08
SYPP08247 SNORD111.1-201ENST00000516421 86 ntBASIC2.03□□□□□ -2.08
SYPP08247 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYPP08247 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
SYPP08247 AC009474.2-201ENST00000451383 136 ntBASIC2.02□□□□□ -2.09
SYPP08247 MIR4498-201ENST00000577599 66 ntBASIC2.02□□□□□ -2.09
SYPP08247 AC015688.6-201ENST00000577737 104 ntBASIC2.02□□□□□ -2.09
SYPP08247 SNORA77B-201ENST00000578179 125 ntBASIC2.02□□□□□ -2.09
SYPP08247 MIR3935-201ENST00000583472 104 ntBASIC2.02□□□□□ -2.09
SYPP08247 MIR548Z-201ENST00000584743 97 ntBASIC2.02□□□□□ -2.09
SYPP08247 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SYPP08247 AL512310.12-203ENST00000640543 90 ntBASIC2.02□□□□□ -2.09
SYPP08247 AC091304.10-201ENST00000641554 121 ntBASIC2.02□□□□□ -2.09
SYPP08247 AC131280.1-202ENST00000624067 4211 ntBASIC2.02□□□□□ -2.09
SYPP08247 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
SYPP08247 SNORD45B-201ENST00000364617 72 ntBASIC2.01□□□□□ -2.09
SYPP08247 Y_RNA.290-201ENST00000364879 114 ntBASIC2.01□□□□□ -2.09
SYPP08247 MIR206-201ENST00000384872 86 ntBASIC2.01□□□□□ -2.09
SYPP08247 RNU6-644P-201ENST00000391155 98 ntBASIC2.01□□□□□ -2.09
SYPP08247 SNORA40.18-201ENST00000391200 128 ntBASIC2.01□□□□□ -2.09
SYPP08247 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
SYPP08247 AL445685.2-201ENST00000422551 342 ntBASIC2.01□□□□□ -2.09
SYPP08247 MIR4777-201ENST00000583710 86 ntBASIC2.01□□□□□ -2.09
SYPP08247 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYPP08247 RNA5SP48-201ENST00000363969 126 ntBASIC2□□□□□ -2.09
SYPP08247 RNU6-60P-201ENST00000364792 103 ntBASIC2□□□□□ -2.09
SYPP08247 RNU6-1307P-201ENST00000391012 103 ntBASIC2□□□□□ -2.09
SYPP08247 RNY4P29-201ENST00000410801 97 ntBASIC2□□□□□ -2.09
SYPP08247 AC079804.2-201ENST00000490376 200 ntBASIC2□□□□□ -2.09
SYPP08247 RNU7-79P-201ENST00000516082 62 ntBASIC2□□□□□ -2.09
SYPP08247 RNU6-922P-201ENST00000516753 99 ntBASIC2□□□□□ -2.09
SYPP08247 RNU6-250P-201ENST00000516958 103 ntBASIC2□□□□□ -2.09
SYPP08247 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2□□□□□ -2.09
SYPP08247 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2□□□□□ -2.09
SYPP08247 Y_RNA.95-201ENST00000363079 95 ntBASIC1.99□□□□□ -2.09
SYPP08247 SNORD38B-201ENST00000384690 67 ntBASIC1.99□□□□□ -2.09
SYPP08247 SNORA26.2-201ENST00000390922 122 ntBASIC1.99□□□□□ -2.09
SYPP08247 RNU6-1086P-201ENST00000410930 100 ntBASIC1.99□□□□□ -2.09
SYPP08247 UBL5P1-201ENST00000507979 193 ntBASIC1.99□□□□□ -2.09
SYPP08247 Y_RNA.659-201ENST00000515994 113 ntBASIC1.99□□□□□ -2.09
SYPP08247 SNORD67.1-201ENST00000516618 108 ntBASIC1.99□□□□□ -2.09
SYPP08247 MIR4713-201ENST00000582691 75 ntBASIC1.99□□□□□ -2.09
SYPP08247 MIR3192-201ENST00000584920 77 ntBASIC1.99□□□□□ -2.09
SYPP08247 Y_RNA.783-201ENST00000613546 102 ntBASIC1.99□□□□□ -2.09
SYPP08247 SNORD38B-202ENST00000625943 69 ntBASIC1.99□□□□□ -2.09
SYPP08247 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SYPP08247 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SYPP08247 RNA5SP37-201ENST00000365420 130 ntBASIC1.98□□□□□ -2.09
SYPP08247 Y_RNA.388-201ENST00000383919 113 ntBASIC1.98□□□□□ -2.09
SYPP08247 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
SYPP08247 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SYPP08247 RPL31P63-201ENST00000422565 375 ntBASIC1.98□□□□□ -2.09
SYPP08247 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
SYPP08247 RNU6-1006P-201ENST00000516998 103 ntBASIC1.98□□□□□ -2.09
SYPP08247 AC026421.1-201ENST00000519101 163 ntBASIC1.98□□□□□ -2.09
SYPP08247 AL096861.1-201ENST00000610899 123 ntBASIC1.98□□□□□ -2.09
SYPP08247 U7.3-201ENST00000616123 62 ntBASIC1.98□□□□□ -2.09
SYPP08247 Y_RNA.247-201ENST00000364500 92 ntBASIC1.97□□□□□ -2.09
SYPP08247 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.97□□□□□ -2.09
SYPP08247 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
SYPP08247 RNU7-137P-201ENST00000516788 62 ntBASIC1.97□□□□□ -2.09
SYPP08247 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
SYPP08247 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.97□□□□□ -2.09
SYPP08247 AL357312.1-201ENST00000603879 298 ntBASIC1.97□□□□□ -2.09
SYPP08247 AC096720.1-201ENST00000604441 183 ntBASIC1.97□□□□□ -2.09
SYPP08247 AC062037.1-201ENST00000605302 128 ntBASIC1.97□□□□□ -2.09
SYPP08247 MIR8074-201ENST00000615081 81 ntBASIC1.97□□□□□ -2.09
SYPP08247 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms