Protein–RNA interactions for Protein: P08047

SP1, Transcription factor Sp1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP1P08047 RNU1-98P-201ENST00000458992 160 ntBASIC1.3□□□□□ -2.2
SP1P08047 snoU13.18-201ENST00000459483 104 ntBASIC1.3□□□□□ -2.2
SP1P08047 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.3□□□□□ -2.2
SP1P08047 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.3□□□□□ -2.2
SP1P08047 Y_RNA.171-201ENST00000363760 102 ntBASIC1.29□□□□□ -2.2
SP1P08047 MIR653-201ENST00000385279 96 ntBASIC1.29□□□□□ -2.2
SP1P08047 RNU6-1319P-201ENST00000390855 104 ntBASIC1.29□□□□□ -2.2
SP1P08047 RNU6-747P-201ENST00000390928 104 ntBASIC1.29□□□□□ -2.2
SP1P08047 RNU6-241P-201ENST00000391148 104 ntBASIC1.29□□□□□ -2.2
SP1P08047 RNU6-177P-201ENST00000411257 104 ntBASIC1.29□□□□□ -2.2
SP1P08047 HMGN1P33-201ENST00000432945 451 ntBASIC1.29□□□□□ -2.2
SP1P08047 AC004812.1-201ENST00000540773 146 ntBASIC1.29□□□□□ -2.2
SP1P08047 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.29□□□□□ -2.2
SP1P08047 uc_338.28-201ENST00000612082 187 ntBASIC1.29□□□□□ -2.2
SP1P08047 MIR6504-201ENST00000613520 61 ntBASIC1.29□□□□□ -2.2
SP1P08047 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
SP1P08047 MIR8063-201ENST00000621930 81 ntBASIC1.29□□□□□ -2.2
SP1P08047 Y_RNA.85-201ENST00000363014 111 ntBASIC1.28□□□□□ -2.2
SP1P08047 SNORA63.5-201ENST00000363548 123 ntBASIC1.28□□□□□ -2.2
SP1P08047 Y_RNA.213-201ENST00000364178 111 ntBASIC1.28□□□□□ -2.2
SP1P08047 RNU6-1107P-201ENST00000364817 104 ntBASIC1.28□□□□□ -2.2
SP1P08047 Y_RNA.344-201ENST00000365381 112 ntBASIC1.28□□□□□ -2.2
SP1P08047 Y_RNA.362-201ENST00000365518 110 ntBASIC1.28□□□□□ -2.2
SP1P08047 RNA5SP259-201ENST00000365541 109 ntBASIC1.28□□□□□ -2.2
SP1P08047 SNORA70.7-201ENST00000384159 133 ntBASIC1.28□□□□□ -2.2
SP1P08047 RNU6-106P-201ENST00000384405 107 ntBASIC1.28□□□□□ -2.2
SP1P08047 Y_RNA.537-201ENST00000384626 109 ntBASIC1.28□□□□□ -2.2
SP1P08047 MIR513A1-201ENST00000385138 129 ntBASIC1.28□□□□□ -2.2
SP1P08047 RNU7-73P-201ENST00000458743 63 ntBASIC1.28□□□□□ -2.2
SP1P08047 RNU7-53P-201ENST00000516705 60 ntBASIC1.28□□□□□ -2.2
SP1P08047 RNU6-902P-201ENST00000517212 91 ntBASIC1.28□□□□□ -2.2
SP1P08047 MIR4679-2-201ENST00000578358 77 ntBASIC1.28□□□□□ -2.2
SP1P08047 MIR3613-201ENST00000579844 87 ntBASIC1.28□□□□□ -2.2
SP1P08047 MIR4764-201ENST00000580680 88 ntBASIC1.28□□□□□ -2.2
SP1P08047 AL020996.3-201ENST00000606617 222 ntBASIC1.28□□□□□ -2.2
SP1P08047 MIR6717-201ENST00000622747 73 ntBASIC1.28□□□□□ -2.2
SP1P08047 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
SP1P08047 MIR450A1-201ENST00000362262 91 ntBASIC1.27□□□□□ -2.21
SP1P08047 MIR302D-201ENST00000362275 68 ntBASIC1.27□□□□□ -2.21
SP1P08047 RNY4P6-201ENST00000363667 96 ntBASIC1.27□□□□□ -2.21
SP1P08047 SNORD1A-201ENST00000364968 72 ntBASIC1.27□□□□□ -2.21
SP1P08047 Y_RNA.470-201ENST00000384307 117 ntBASIC1.27□□□□□ -2.21
SP1P08047 Y_RNA.531-201ENST00000384589 121 ntBASIC1.27□□□□□ -2.21
SP1P08047 MIR520C-201ENST00000385005 87 ntBASIC1.27□□□□□ -2.21
SP1P08047 AL022718.1-201ENST00000412004 84 ntBASIC1.27□□□□□ -2.21
SP1P08047 AC079140.2-201ENST00000506193 142 ntBASIC1.27□□□□□ -2.21
SP1P08047 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.27□□□□□ -2.21
SP1P08047 SNORA4-201ENST00000584302 138 ntBASIC1.27□□□□□ -2.21
SP1P08047 AL513534.2-201ENST00000603836 250 ntBASIC1.27□□□□□ -2.21
SP1P08047 MIR8055-201ENST00000610739 97 ntBASIC1.27□□□□□ -2.21
SP1P08047 AL353770.2-201ENST00000620024 78 ntBASIC1.27□□□□□ -2.21
SP1P08047 MIR6841-201ENST00000637129 72 ntBASIC1.27□□□□□ -2.21
SP1P08047 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SP1P08047 SNORA22.1-201ENST00000362701 134 ntBASIC1.26□□□□□ -2.21
SP1P08047 SNORA51.10-201ENST00000384418 136 ntBASIC1.26□□□□□ -2.21
SP1P08047 MIR548D2-201ENST00000384955 97 ntBASIC1.26□□□□□ -2.21
SP1P08047 SNORD41-201ENST00000386967 70 ntBASIC1.26□□□□□ -2.21
SP1P08047 MIR759-201ENST00000390224 91 ntBASIC1.26□□□□□ -2.21
SP1P08047 RNU6-554P-201ENST00000410466 106 ntBASIC1.26□□□□□ -2.21
SP1P08047 RNU6-955P-201ENST00000410497 104 ntBASIC1.26□□□□□ -2.21
SP1P08047 RPS23P4-201ENST00000487908 423 ntBASIC1.26□□□□□ -2.21
SP1P08047 RNU7-41P-201ENST00000515917 61 ntBASIC1.26□□□□□ -2.21
SP1P08047 RNU6-412P-201ENST00000516434 106 ntBASIC1.26□□□□□ -2.21
SP1P08047 RNU7-43P-201ENST00000516554 64 ntBASIC1.26□□□□□ -2.21
SP1P08047 RNU7-6P-201ENST00000516845 62 ntBASIC1.26□□□□□ -2.21
SP1P08047 AC015688.6-201ENST00000577737 104 ntBASIC1.26□□□□□ -2.21
SP1P08047 AC087741.2-201ENST00000619415 172 ntBASIC1.26□□□□□ -2.21
SP1P08047 AC008133.2-201ENST00000624540 351 ntBASIC1.26□□□□□ -2.21
SP1P08047 RNU6-1014P-201ENST00000383940 103 ntBASIC1.25□□□□□ -2.21
SP1P08047 RNU6-1065P-201ENST00000384513 106 ntBASIC1.25□□□□□ -2.21
SP1P08047 RNU6-1067P-201ENST00000384752 107 ntBASIC1.25□□□□□ -2.21
SP1P08047 MIR320A-201ENST00000385302 82 ntBASIC1.25□□□□□ -2.21
SP1P08047 RNU7-113P-201ENST00000459273 62 ntBASIC1.25□□□□□ -2.21
SP1P08047 MIR1270-201ENST00000459320 83 ntBASIC1.25□□□□□ -2.21
SP1P08047 RNU6-922P-201ENST00000516753 99 ntBASIC1.25□□□□□ -2.21
SP1P08047 MIR3152-201ENST00000579801 74 ntBASIC1.25□□□□□ -2.21
SP1P08047 MIR548AO-201ENST00000579992 96 ntBASIC1.25□□□□□ -2.21
SP1P08047 MIR3163-201ENST00000581592 73 ntBASIC1.25□□□□□ -2.21
SP1P08047 Y_RNA.773-201ENST00000607168 90 ntBASIC1.25□□□□□ -2.21
SP1P08047 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SP1P08047 AL589743.1-201ENST00000551932 2712 ntBASIC1.24□□□□□ -2.21
SP1P08047 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
SP1P08047 Y_RNA.191-201ENST00000363972 113 ntBASIC1.24□□□□□ -2.21
SP1P08047 U8.6-201ENST00000364939 135 ntBASIC1.24□□□□□ -2.21
SP1P08047 Y_RNA.430-201ENST00000384081 110 ntBASIC1.24□□□□□ -2.21
SP1P08047 MIR7-2-201ENST00000384970 110 ntBASIC1.24□□□□□ -2.21
SP1P08047 AL451046.2-201ENST00000403074 277 ntBASIC1.24□□□□□ -2.21
SP1P08047 AC090844.1-201ENST00000422019 156 ntBASIC1.24□□□□□ -2.21
SP1P08047 AC027119.1-201ENST00000440877 241 ntBASIC1.24□□□□□ -2.21
SP1P08047 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
SP1P08047 snoU13.16-201ENST00000459350 104 ntBASIC1.24□□□□□ -2.21
SP1P08047 RPL39P34-201ENST00000477141 156 ntBASIC1.24□□□□□ -2.21
SP1P08047 RNA5SP102-201ENST00000516865 106 ntBASIC1.24□□□□□ -2.21
SP1P08047 MIR3192-201ENST00000584920 77 ntBASIC1.24□□□□□ -2.21
SP1P08047 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.24□□□□□ -2.21
SP1P08047 SNORD115-2-201ENST00000362842 82 ntBASIC1.23□□□□□ -2.21
SP1P08047 Y_RNA.163-201ENST00000363702 113 ntBASIC1.23□□□□□ -2.21
SP1P08047 SNORD115-20-201ENST00000365099 82 ntBASIC1.23□□□□□ -2.21
SP1P08047 Y_RNA.323-201ENST00000365157 109 ntBASIC1.23□□□□□ -2.21
SP1P08047 RNA5SP89-201ENST00000410300 108 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms