Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.48□□□□□ -2.65
HMGB3O15347 RNU4-70P-201ENST00000384579 139 ntBASIC-1.48□□□□□ -2.65
HMGB3O15347 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.48□□□□□ -2.65
HMGB3O15347 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.48□□□□□ -2.65
HMGB3O15347 RNU6-721P-201ENST00000410155 105 ntBASIC-1.48□□□□□ -2.65
HMGB3O15347 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.48□□□□□ -2.65
HMGB3O15347 RNU6-893P-201ENST00000458841 100 ntBASIC-1.48□□□□□ -2.65
HMGB3O15347 MIR4724-201ENST00000579485 89 ntBASIC-1.48□□□□□ -2.65
HMGB3O15347 MIR548AE1-201ENST00000583292 70 ntBASIC-1.48□□□□□ -2.65
HMGB3O15347 MIR367-201ENST00000362299 68 ntBASIC-1.49□□□□□ -2.65
HMGB3O15347 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.49□□□□□ -2.65
HMGB3O15347 RNU6-763P-201ENST00000390865 106 ntBASIC-1.49□□□□□ -2.65
HMGB3O15347 MIR548F5-201ENST00000408421 86 ntBASIC-1.49□□□□□ -2.65
HMGB3O15347 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.49□□□□□ -2.65
HMGB3O15347 RNU2-66P-201ENST00000410650 161 ntBASIC-1.49□□□□□ -2.65
HMGB3O15347 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.49□□□□□ -2.65
HMGB3O15347 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.49□□□□□ -2.65
HMGB3O15347 MIR5197-201ENST00000583721 112 ntBASIC-1.49□□□□□ -2.65
HMGB3O15347 AC013791.1-201ENST00000616619 62 ntBASIC-1.49□□□□□ -2.65
HMGB3O15347 RNY3P11-201ENST00000364153 102 ntBASIC-1.5□□□□□ -2.65
HMGB3O15347 RNU6-154P-201ENST00000384306 106 ntBASIC-1.5□□□□□ -2.65
HMGB3O15347 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.5□□□□□ -2.65
HMGB3O15347 RNU6-120P-201ENST00000516077 103 ntBASIC-1.5□□□□□ -2.65
HMGB3O15347 RNU6-191P-201ENST00000516295 94 ntBASIC-1.5□□□□□ -2.65
HMGB3O15347 RNY1P9-201ENST00000532431 109 ntBASIC-1.5□□□□□ -2.65
HMGB3O15347 MIR3115-201ENST00000577915 68 ntBASIC-1.5□□□□□ -2.65
HMGB3O15347 MIR4306-201ENST00000583390 91 ntBASIC-1.5□□□□□ -2.65
HMGB3O15347 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.5□□□□□ -2.65
HMGB3O15347 AC138305.3-201ENST00000624988 240 ntBASIC-1.5□□□□□ -2.65
HMGB3O15347 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.51□□□□□ -2.65
HMGB3O15347 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.51□□□□□ -2.65
HMGB3O15347 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.51□□□□□ -2.65
HMGB3O15347 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.51□□□□□ -2.65
HMGB3O15347 SNORD63-201ENST00000384262 68 ntBASIC-1.51□□□□□ -2.65
HMGB3O15347 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.51□□□□□ -2.65
HMGB3O15347 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.51□□□□□ -2.65
HMGB3O15347 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.51□□□□□ -2.65
HMGB3O15347 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.51□□□□□ -2.65
HMGB3O15347 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.51□□□□□ -2.65
HMGB3O15347 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.51□□□□□ -2.65
HMGB3O15347 AC090582.1-201ENST00000636321 199 ntBASIC-1.51□□□□□ -2.65
HMGB3O15347 MTND5P18-201ENST00000445624 1801 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 MIR519E-201ENST00000385075 84 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 MIR519A1-201ENST00000385257 85 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 RNU7-55P-201ENST00000459426 62 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 RNU7-137P-201ENST00000516788 62 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 RNU6-264P-201ENST00000517134 104 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 AC040926.1-201ENST00000530195 238 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 MIR3179-1-201ENST00000578940 84 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 MIR3179-2-201ENST00000579107 84 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 MIR3179-3-201ENST00000579566 84 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
HMGB3O15347 MIR3179-4-201ENST00000617599 84 ntBASIC-1.52□□□□□ -2.65
HMGB3O15347 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.53□□□□□ -2.65
HMGB3O15347 SNORD115-44-201ENST00000365391 82 ntBASIC-1.53□□□□□ -2.65
HMGB3O15347 MIR628-201ENST00000385229 95 ntBASIC-1.53□□□□□ -2.65
HMGB3O15347 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.53□□□□□ -2.65
HMGB3O15347 AP000676.1-201ENST00000533307 52 ntBASIC-1.53□□□□□ -2.65
HMGB3O15347 AC024909.2-201ENST00000553035 286 ntBASIC-1.53□□□□□ -2.65
HMGB3O15347 AC097639.2-201ENST00000603159 172 ntBASIC-1.53□□□□□ -2.65
HMGB3O15347 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.53□□□□□ -2.65
HMGB3O15347 AC011603.4-201ENST00000611325 277 ntBASIC-1.53□□□□□ -2.65
HMGB3O15347 MIR20A-201ENST00000362279 71 ntBASIC-1.54□□□□□ -2.66
HMGB3O15347 RNU6-21P-201ENST00000384710 107 ntBASIC-1.54□□□□□ -2.66
HMGB3O15347 SNORA53-201ENST00000391141 249 ntBASIC-1.54□□□□□ -2.66
HMGB3O15347 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.54□□□□□ -2.66
HMGB3O15347 RNU2-55P-201ENST00000411146 174 ntBASIC-1.54□□□□□ -2.66
HMGB3O15347 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.54□□□□□ -2.66
HMGB3O15347 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.54□□□□□ -2.66
HMGB3O15347 Z99129.1-201ENST00000612510 255 ntBASIC-1.54□□□□□ -2.66
HMGB3O15347 AC015540.1-201ENST00000615828 501 ntBASIC-1.54□□□□□ -2.66
HMGB3O15347 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 SNORD114-10-201ENST00000363409 72 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 MIR617-201ENST00000385030 97 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 MIR518B-201ENST00000385127 83 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 AC107399.1-201ENST00000451226 265 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 RNA5SP153-201ENST00000516498 76 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 AC109635.3-201ENST00000529536 185 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 MIR5692C2-201ENST00000577959 77 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 MIR5688-201ENST00000580619 83 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 MIR548AG2-201ENST00000581228 64 ntBASIC-1.55□□□□□ -2.66
HMGB3O15347 RNU4-32P-201ENST00000363404 141 ntBASIC-1.56□□□□□ -2.66
HMGB3O15347 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.56□□□□□ -2.66
HMGB3O15347 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.56□□□□□ -2.66
HMGB3O15347 RNU6-484P-201ENST00000384016 107 ntBASIC-1.56□□□□□ -2.66
HMGB3O15347 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.56□□□□□ -2.66
HMGB3O15347 MTND1P34-201ENST00000438556 671 ntBASIC-1.56□□□□□ -2.66
HMGB3O15347 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.56□□□□□ -2.66
HMGB3O15347 RNU6-764P-201ENST00000516396 105 ntBASIC-1.56□□□□□ -2.66
HMGB3O15347 AC140658.3-201ENST00000567603 271 ntBASIC-1.56□□□□□ -2.66
HMGB3O15347 SNORD115-2-201ENST00000362842 82 ntBASIC-1.57□□□□□ -2.66
HMGB3O15347 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.57□□□□□ -2.66
HMGB3O15347 RNY3-201ENST00000365484 102 ntBASIC-1.57□□□□□ -2.66
HMGB3O15347 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.57□□□□□ -2.66
HMGB3O15347 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.57□□□□□ -2.66
HMGB3O15347 MIR526A2-201ENST00000390198 65 ntBASIC-1.57□□□□□ -2.66
HMGB3O15347 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.57□□□□□ -2.66
HMGB3O15347 SNORD67.1-201ENST00000516618 108 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 299.4 ms