Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC021443.1-201ENST00000604478 211 ntBASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 AL157834.3-201ENST00000615543 103 ntBASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 AL137067.1-201ENST00000615933 120 ntBASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 MIR539-201ENST00000365690 78 ntBASIC1.09□□□□□ -2.23
TCRBV7S3A2A0A539 MIR588-201ENST00000384900 83 ntBASIC1.09□□□□□ -2.23
TCRBV7S3A2A0A539 RNU6-205P-201ENST00000390858 107 ntBASIC1.09□□□□□ -2.23
TCRBV7S3A2A0A539 AC113410.1-201ENST00000505029 247 ntBASIC1.09□□□□□ -2.23
TCRBV7S3A2A0A539 RNU2-35P-201ENST00000516446 142 ntBASIC1.09□□□□□ -2.23
TCRBV7S3A2A0A539 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
TCRBV7S3A2A0A539 MIR6740-201ENST00000618268 113 ntBASIC1.09□□□□□ -2.23
TCRBV7S3A2A0A539 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
TCRBV7S3A2A0A539 AC091895.1-201ENST00000624494 256 ntBASIC1.09□□□□□ -2.23
TCRBV7S3A2A0A539 Y_RNA.171-201ENST00000363760 102 ntBASIC1.08□□□□□ -2.24
TCRBV7S3A2A0A539 Y_RNA.298-201ENST00000364960 107 ntBASIC1.08□□□□□ -2.24
TCRBV7S3A2A0A539 SNORA2B-201ENST00000384583 137 ntBASIC1.08□□□□□ -2.24
TCRBV7S3A2A0A539 Y_RNA.617-201ENST00000410920 90 ntBASIC1.08□□□□□ -2.24
TCRBV7S3A2A0A539 RNU7-62P-201ENST00000458856 62 ntBASIC1.08□□□□□ -2.24
TCRBV7S3A2A0A539 RNU7-164P-201ENST00000459221 62 ntBASIC1.08□□□□□ -2.24
TCRBV7S3A2A0A539 AC023827.1-201ENST00000569247 97 ntBASIC1.08□□□□□ -2.24
TCRBV7S3A2A0A539 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TCRBV7S3A2A0A539 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.08□□□□□ -2.24
TCRBV7S3A2A0A539 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 Y_RNA.294-201ENST00000364916 102 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 Y_RNA.531-201ENST00000384589 121 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 MIR200A-201ENST00000384875 90 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 AL512326.2-201ENST00000426359 151 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 RNU7-113P-201ENST00000459273 62 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 RNU5E-3P-201ENST00000515913 68 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 RN7SKP19-201ENST00000516016 252 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 IGKV1-22-201ENST00000524313 326 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 AC004812.1-201ENST00000540773 146 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 MIR4781-201ENST00000585250 76 ntBASIC1.07□□□□□ -2.24
TCRBV7S3A2A0A539 RNU6-1165P-201ENST00000410119 107 ntBASIC1.06□□□□□ -2.24
TCRBV7S3A2A0A539 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
TCRBV7S3A2A0A539 MIR18B-201ENST00000454574 71 ntBASIC1.06□□□□□ -2.24
TCRBV7S3A2A0A539 RNU7-123P-201ENST00000515911 60 ntBASIC1.06□□□□□ -2.24
TCRBV7S3A2A0A539 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.06□□□□□ -2.24
TCRBV7S3A2A0A539 MIR30D-201ENST00000362283 70 ntBASIC1.05□□□□□ -2.24
TCRBV7S3A2A0A539 RNU7-40P-201ENST00000516397 64 ntBASIC1.05□□□□□ -2.24
TCRBV7S3A2A0A539 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.05□□□□□ -2.24
TCRBV7S3A2A0A539 AL662814.1-201ENST00000617364 121 ntBASIC1.05□□□□□ -2.24
TCRBV7S3A2A0A539 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
TCRBV7S3A2A0A539 RNU6-81P-201ENST00000365608 104 ntBASIC1.04□□□□□ -2.24
TCRBV7S3A2A0A539 Y_RNA.470-201ENST00000384307 117 ntBASIC1.04□□□□□ -2.24
TCRBV7S3A2A0A539 MT-TF-201ENST00000387314 71 ntBASIC1.04□□□□□ -2.24
TCRBV7S3A2A0A539 RNA5SP136-201ENST00000410906 107 ntBASIC1.04□□□□□ -2.24
TCRBV7S3A2A0A539 RNU6-1086P-201ENST00000410930 100 ntBASIC1.04□□□□□ -2.24
TCRBV7S3A2A0A539 TMSB4XP3-201ENST00000445144 114 ntBASIC1.04□□□□□ -2.24
TCRBV7S3A2A0A539 RNY4P20-201ENST00000516678 93 ntBASIC1.04□□□□□ -2.24
TCRBV7S3A2A0A539 RNU6-94P-201ENST00000607728 107 ntBASIC1.04□□□□□ -2.24
TCRBV7S3A2A0A539 uc_338.6-201ENST00000613544 171 ntBASIC1.04□□□□□ -2.24
TCRBV7S3A2A0A539 MIR378A-201ENST00000362177 66 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 Y_RNA.140-201ENST00000363474 103 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 Y_RNA.299-201ENST00000364973 94 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 RNU6-53P-201ENST00000365367 106 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 RNU6-939P-201ENST00000384634 107 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 MIRLET7F2-201ENST00000385277 83 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 FABP5P4-201ENST00000437203 171 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 RNA5SP33-201ENST00000516687 98 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 RNU6-971P-201ENST00000516920 106 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 RNU7-35P-201ENST00000517174 62 ntBASIC1.03□□□□□ -2.24
TCRBV7S3A2A0A539 RNU6-934P-201ENST00000365154 107 ntBASIC1.02□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-80P-201ENST00000384195 107 ntBASIC1.02□□□□□ -2.25
TCRBV7S3A2A0A539 SNORA18-201ENST00000384416 132 ntBASIC1.02□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-342P-201ENST00000384521 104 ntBASIC1.02□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.02□□□□□ -2.25
TCRBV7S3A2A0A539 RNA5SP237-201ENST00000410414 113 ntBASIC1.02□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-1211P-201ENST00000459179 105 ntBASIC1.02□□□□□ -2.25
TCRBV7S3A2A0A539 snoU13.21-201ENST00000459368 105 ntBASIC1.02□□□□□ -2.25
TCRBV7S3A2A0A539 SNORD124-201ENST00000459577 104 ntBASIC1.02□□□□□ -2.25
TCRBV7S3A2A0A539 AC141846.1-201ENST00000568348 142 ntBASIC1.02□□□□□ -2.25
TCRBV7S3A2A0A539 AL391516.1-201ENST00000554380 2449 ntBASIC1.01□□□□□ -2.25
TCRBV7S3A2A0A539 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-369P-201ENST00000362515 102 ntBASIC1.01□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-235P-201ENST00000362644 107 ntBASIC1.01□□□□□ -2.25
TCRBV7S3A2A0A539 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.01□□□□□ -2.25
TCRBV7S3A2A0A539 RPS26P5-201ENST00000418544 335 ntBASIC1.01□□□□□ -2.25
TCRBV7S3A2A0A539 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
TCRBV7S3A2A0A539 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-1104P-201ENST00000384723 104 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-1237P-201ENST00000384777 107 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 MIR1827-201ENST00000408549 66 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-994P-201ENST00000410507 111 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 RNU4-69P-201ENST00000410677 143 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 U7.7-201ENST00000459276 60 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 COX6CP6-201ENST00000490840 228 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-781P-201ENST00000516377 101 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-1110P-201ENST00000516462 101 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 MIR548AE2-201ENST00000583456 67 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 SNORA4-201ENST00000584302 138 ntBASIC1□□□□□ -2.25
TCRBV7S3A2A0A539 Y_RNA.198-201ENST00000364013 98 ntBASIC0.99□□□□□ -2.25
TCRBV7S3A2A0A539 SNORD58C-201ENST00000365223 64 ntBASIC0.99□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-949P-201ENST00000384040 107 ntBASIC0.99□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6-959P-201ENST00000384671 107 ntBASIC0.99□□□□□ -2.25
TCRBV7S3A2A0A539 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms