Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC140658.3-201ENST00000567603 271 ntBASIC1.4□□□□□ -2.18
NOTCH3Q9UM47 AC092881.1-201ENST00000638218 2733 ntBASIC1.4□□□□□ -2.18
NOTCH3Q9UM47 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 SNORD14E-201ENST00000364009 85 ntBASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 SNORA26.6-201ENST00000391256 115 ntBASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 RNU4-69P-201ENST00000410677 143 ntBASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 RNU6-402P-201ENST00000410678 103 ntBASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 SRIP3-201ENST00000413200 219 ntBASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 RNU1-40P-201ENST00000516816 164 ntBASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 RNU1-97P-201ENST00000516872 164 ntBASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 AC090821.2-201ENST00000523552 176 ntBASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 AC084768.2-201ENST00000622736 221 ntBASIC1.4□□□□□ -2.19
NOTCH3Q9UM47 RNU6-170P-201ENST00000362832 104 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-27-201ENST00000364430 82 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 RNU6-1319P-201ENST00000390855 104 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 RNU6-747P-201ENST00000390928 104 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 RNU6-241P-201ENST00000391148 104 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 RNU6-177P-201ENST00000411257 104 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 AC123900.1-201ENST00000420390 96 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 AC069257.2-201ENST00000441819 155 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 RNU6-717P-201ENST00000459076 104 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 RNA5SP309-201ENST00000516670 106 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 MIR5739-201ENST00000619803 80 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 PVT1_3.1-201ENST00000620853 95 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 UCA1.1-201ENST00000620952 75 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 MIR340-201ENST00000362125 95 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 Y_RNA.370-201ENST00000365589 108 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 Y_RNA.377-201ENST00000365644 108 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 Y_RNA.426-201ENST00000384068 113 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 RNU6-160P-201ENST00000384591 107 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 MIR206-201ENST00000384872 86 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 RNU6-1321P-201ENST00000390905 107 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 SNORD77B-201ENST00000391112 67 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 CST2P1-201ENST00000425770 87 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 RNA5SP33-201ENST00000516687 98 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 MIR4668-201ENST00000582284 70 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 MIR8054-201ENST00000620877 86 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 MIR203B-201ENST00000636080 86 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 AP000553.5-201ENST00000641933 54 ntBASIC1.39□□□□□ -2.19
NOTCH3Q9UM47 RNU6-624P-201ENST00000363411 107 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 RNU6-1163P-201ENST00000364516 107 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 Y_RNA.336-201ENST00000365307 109 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORA24-201ENST00000384096 131 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 RNU6-1328P-201ENST00000410938 106 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 AL606517.2-201ENST00000442855 241 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 RPS29P28-201ENST00000446439 141 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 MIR4439-201ENST00000583746 80 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-34-201ENST00000362441 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-12-201ENST00000362583 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 RNU6-633P-201ENST00000362612 103 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-29-201ENST00000362834 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-2-201ENST00000362842 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-9-201ENST00000362912 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-21-201ENST00000362963 81 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-14-201ENST00000363090 81 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-13-201ENST00000363358 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-41-201ENST00000363608 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-11-201ENST00000363616 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-5-201ENST00000363633 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-39-201ENST00000363694 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-4-201ENST00000363810 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-16-201ENST00000363887 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-6-201ENST00000363942 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-42-201ENST00000364273 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-15-201ENST00000364809 81 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-1-201ENST00000364961 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-26-201ENST00000365067 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-10-201ENST00000365073 81 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-20-201ENST00000365099 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-43-201ENST00000365503 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD115-36-201ENST00000365629 82 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 AC015922.2-201ENST00000435593 184 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 AC079804.2-201ENST00000490376 200 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 SNORD45.4-201ENST00000516629 73 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 AC024995.1-201ENST00000523014 93 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 U4atac.1-201ENST00000618345 95 ntBASIC1.38□□□□□ -2.19
NOTCH3Q9UM47 HMGN2P35-201ENST00000412164 270 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 SCARNA18B-201ENST00000458806 135 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 UBL5P1-201ENST00000507979 193 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 AC021613.1-201ENST00000623880 111 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 Y_RNA.171-201ENST00000363760 102 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 MIR889-201ENST00000401280 79 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 AL161932.1-201ENST00000437408 146 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 AC025033.1-201ENST00000463883 194 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 RNU6-1041P-201ENST00000516254 102 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 RPPH1-2P-201ENST00000516688 293 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 AL513043.2-201ENST00000573941 143 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 AL049779.4-201ENST00000604500 156 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 AC027279.3-201ENST00000625055 122 ntBASIC1.37□□□□□ -2.19
NOTCH3Q9UM47 MIR7515-201ENST00000637837 67 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms