Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 RNU6-1299P-201ENST00000516316 100 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 RNU7-53P-201ENST00000516705 60 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 AL442663.2-201ENST00000554385 511 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 AC090897.1-201ENST00000580909 226 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 SNORD92-201ENST00000585078 85 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 AL442067.1-201ENST00000613261 223 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 AL365265.1-201ENST00000621045 234 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 SNORD38B-202ENST00000625943 69 ntBASIC0.27□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.76-201ENST00000362931 109 ntBASIC0.26□□□□□ -2.37
CDH9Q9ULB4 RNU6-1309P-201ENST00000363305 108 ntBASIC0.26□□□□□ -2.37
CDH9Q9ULB4 RNU6-1189P-201ENST00000383958 107 ntBASIC0.26□□□□□ -2.37
CDH9Q9ULB4 RNU6-639P-201ENST00000384074 107 ntBASIC0.26□□□□□ -2.37
CDH9Q9ULB4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.26□□□□□ -2.37
CDH9Q9ULB4 RNU7-185P-201ENST00000459215 60 ntBASIC0.26□□□□□ -2.37
CDH9Q9ULB4 RNU6-126P-201ENST00000516685 103 ntBASIC0.26□□□□□ -2.37
CDH9Q9ULB4 AC044792.1-201ENST00000593294 196 ntBASIC0.26□□□□□ -2.37
CDH9Q9ULB4 MIR8062-201ENST00000621515 85 ntBASIC0.26□□□□□ -2.37
CDH9Q9ULB4 MIR6717-201ENST00000622747 73 ntBASIC0.26□□□□□ -2.37
CDH9Q9ULB4 MIR6841-201ENST00000637129 72 ntBASIC0.26□□□□□ -2.37
CDH9Q9ULB4 SNORA63C-201ENST00000364578 129 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 SNORA1.1-201ENST00000364671 133 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.326-201ENST00000365176 113 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.416-201ENST00000384014 113 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.432-201ENST00000384087 111 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 MIR938-201ENST00000401216 83 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 RNU4-43P-201ENST00000410628 137 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 RNU7-102P-201ENST00000458948 62 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 MIR5197-201ENST00000583721 112 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 MIR8066-201ENST00000617280 78 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 AC092634.7-201ENST00000621022 103 ntBASIC0.25□□□□□ -2.37
CDH9Q9ULB4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CDH9Q9ULB4 RNU6-978P-201ENST00000364371 103 ntBASIC0.24□□□□□ -2.37
CDH9Q9ULB4 RNA5SP517-201ENST00000364724 117 ntBASIC0.24□□□□□ -2.37
CDH9Q9ULB4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.396-201ENST00000383949 103 ntBASIC0.24□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.430-201ENST00000384081 110 ntBASIC0.24□□□□□ -2.37
CDH9Q9ULB4 SCARNA15-202ENST00000516881 127 ntBASIC0.24□□□□□ -2.37
CDH9Q9ULB4 AP003072.1-201ENST00000531740 145 ntBASIC0.24□□□□□ -2.37
CDH9Q9ULB4 MIR1273G-201ENST00000577677 100 ntBASIC0.24□□□□□ -2.37
CDH9Q9ULB4 AL365205.2-201ENST00000594586 68 ntBASIC0.24□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.23□□□□□ -2.37
CDH9Q9ULB4 MT-TF-201ENST00000387314 71 ntBASIC0.23□□□□□ -2.37
CDH9Q9ULB4 SNORA26-201ENST00000391286 122 ntBASIC0.23□□□□□ -2.37
CDH9Q9ULB4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.23□□□□□ -2.37
CDH9Q9ULB4 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
CDH9Q9ULB4 RNU6-635P-201ENST00000516651 102 ntBASIC0.23□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.720-201ENST00000517166 92 ntBASIC0.23□□□□□ -2.37
CDH9Q9ULB4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.23□□□□□ -2.37
CDH9Q9ULB4 MIR3129-201ENST00000581095 76 ntBASIC0.23□□□□□ -2.37
CDH9Q9ULB4 AC078938.1-201ENST00000620993 318 ntBASIC0.23□□□□□ -2.37
CDH9Q9ULB4 AC091932.4-201ENST00000623386 200 ntBASIC0.23□□□□□ -2.37
CDH9Q9ULB4 MIR924-201ENST00000638017 53 ntBASIC0.23□□□□□ -2.37
CDH9Q9ULB4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
CDH9Q9ULB4 MIR103A1-201ENST00000362165 78 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.7-201ENST00000362352 102 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 SNORD44.1-201ENST00000363202 61 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.176-201ENST00000363815 109 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 RNU6-1292P-201ENST00000383856 107 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.542-201ENST00000384641 111 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 Y_RNA.574-201ENST00000384766 95 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 RNU6-1319P-201ENST00000390855 104 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 RNU6-747P-201ENST00000390928 104 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 RNU6-241P-201ENST00000391148 104 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 RNU6-863P-201ENST00000515989 104 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 RNA5SP94-201ENST00000516917 108 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 RNU7-156P-201ENST00000517214 74 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.22□□□□□ -2.37
CDH9Q9ULB4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.22□□□□□ -2.37
CDH9Q9ULB4 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
CDH9Q9ULB4 SNORA36.1-201ENST00000363424 132 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 Y_RNA.351-201ENST00000365436 96 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 Y_RNA.461-201ENST00000384263 103 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 Y_RNA.466-201ENST00000384294 113 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 RNU6-1160P-201ENST00000384546 104 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 U8.15-201ENST00000390947 134 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 SNORD58.1-201ENST00000391313 66 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 Y_RNA.590-201ENST00000410140 107 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 MTND1P19-201ENST00000511780 315 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 RNY3P16-201ENST00000516338 101 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 AL117187.1-201ENST00000555482 181 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 AL662814.1-201ENST00000617364 121 ntBASIC0.21□□□□□ -2.38
CDH9Q9ULB4 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 RNU6-238P-201ENST00000363313 106 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 SNORD118-201ENST00000363593 134 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 Y_RNA.199-201ENST00000364014 102 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 RNY4P28-201ENST00000365281 93 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 Y_RNA.562-201ENST00000384695 113 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 MIR518A1-201ENST00000385068 85 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 MIR1257-201ENST00000408490 117 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 SNORA25.12-201ENST00000516202 82 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 RNU6-1258P-201ENST00000516911 111 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 MIR3678-201ENST00000578455 94 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
CDH9Q9ULB4 MIR330-201ENST00000362196 94 ntBASIC0.19□□□□□ -2.38
CDH9Q9ULB4 MIR342-201ENST00000362212 99 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms