Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 MIR548I1-201ENST00000408810 149 ntBASIC1.56□□□□□ -2.16
USP35Q9P2H5 RNU6-182P-201ENST00000516970 105 ntBASIC1.56□□□□□ -2.16
USP35Q9P2H5 U6.106-201ENST00000636360 105 ntBASIC1.56□□□□□ -2.16
USP35Q9P2H5 Y_RNA.178-201ENST00000363832 102 ntBASIC1.55□□□□□ -2.16
USP35Q9P2H5 SNORD113.3-201ENST00000364630 78 ntBASIC1.55□□□□□ -2.16
USP35Q9P2H5 FABP5P4-201ENST00000437203 171 ntBASIC1.55□□□□□ -2.16
USP35Q9P2H5 AC036111.3-201ENST00000526389 112 ntBASIC1.55□□□□□ -2.16
USP35Q9P2H5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
USP35Q9P2H5 Y_RNA.168-201ENST00000363740 102 ntBASIC1.54□□□□□ -2.16
USP35Q9P2H5 Y_RNA.412-201ENST00000384001 104 ntBASIC1.54□□□□□ -2.16
USP35Q9P2H5 RNU6-886P-201ENST00000384319 105 ntBASIC1.54□□□□□ -2.16
USP35Q9P2H5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.54□□□□□ -2.16
USP35Q9P2H5 OR2A41P-201ENST00000473586 105 ntBASIC1.54□□□□□ -2.16
USP35Q9P2H5 MIR3129-201ENST00000581095 76 ntBASIC1.54□□□□□ -2.16
USP35Q9P2H5 MIR8055-201ENST00000610739 97 ntBASIC1.54□□□□□ -2.16
USP35Q9P2H5 RNY1P4-201ENST00000384595 115 ntBASIC1.53□□□□□ -2.16
USP35Q9P2H5 SNORD124-201ENST00000459577 104 ntBASIC1.53□□□□□ -2.16
USP35Q9P2H5 MIR4661-201ENST00000582720 75 ntBASIC1.53□□□□□ -2.16
USP35Q9P2H5 MIR4264-201ENST00000583520 66 ntBASIC1.53□□□□□ -2.16
USP35Q9P2H5 AP000753.3-201ENST00000604083 169 ntBASIC1.53□□□□□ -2.16
USP35Q9P2H5 AC072026.1-201ENST00000605023 201 ntBASIC1.53□□□□□ -2.16
USP35Q9P2H5 Z97988.1-201ENST00000637697 135 ntBASIC1.53□□□□□ -2.16
USP35Q9P2H5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USP35Q9P2H5 RNU6-654P-201ENST00000364373 107 ntBASIC1.52□□□□□ -2.17
USP35Q9P2H5 RNU5E-9P-201ENST00000411164 104 ntBASIC1.52□□□□□ -2.17
USP35Q9P2H5 RNU7-80P-201ENST00000459562 61 ntBASIC1.52□□□□□ -2.17
USP35Q9P2H5 MIR5000-201ENST00000577717 103 ntBASIC1.52□□□□□ -2.17
USP35Q9P2H5 MIR4431-201ENST00000579990 94 ntBASIC1.52□□□□□ -2.17
USP35Q9P2H5 AC098479.1-201ENST00000609225 154 ntBASIC1.52□□□□□ -2.17
USP35Q9P2H5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
USP35Q9P2H5 Y_RNA.240-201ENST00000364469 95 ntBASIC1.51□□□□□ -2.17
USP35Q9P2H5 RNU6-312P-201ENST00000364629 107 ntBASIC1.51□□□□□ -2.17
USP35Q9P2H5 RNU6-580P-201ENST00000365159 107 ntBASIC1.51□□□□□ -2.17
USP35Q9P2H5 Y_RNA.454-201ENST00000384224 113 ntBASIC1.51□□□□□ -2.17
USP35Q9P2H5 RNU6-913P-201ENST00000390913 95 ntBASIC1.51□□□□□ -2.17
USP35Q9P2H5 RPS29P28-201ENST00000446439 141 ntBASIC1.51□□□□□ -2.17
USP35Q9P2H5 UBL5P1-201ENST00000507979 193 ntBASIC1.51□□□□□ -2.17
USP35Q9P2H5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.51□□□□□ -2.17
USP35Q9P2H5 AC023827.1-201ENST00000569247 97 ntBASIC1.51□□□□□ -2.17
USP35Q9P2H5 Y_RNA.555-201ENST00000384673 110 ntBASIC1.5□□□□□ -2.17
USP35Q9P2H5 MIR942-201ENST00000401111 86 ntBASIC1.5□□□□□ -2.17
USP35Q9P2H5 MIR1285-1-201ENST00000408593 84 ntBASIC1.5□□□□□ -2.17
USP35Q9P2H5 RNA5SP127-201ENST00000411051 133 ntBASIC1.5□□□□□ -2.17
USP35Q9P2H5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.5□□□□□ -2.17
USP35Q9P2H5 RNU2-11P-201ENST00000459191 187 ntBASIC1.5□□□□□ -2.17
USP35Q9P2H5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.5□□□□□ -2.17
USP35Q9P2H5 RN7SL793P-201ENST00000583259 296 ntBASIC1.5□□□□□ -2.17
USP35Q9P2H5 AL020996.3-201ENST00000606617 222 ntBASIC1.5□□□□□ -2.17
USP35Q9P2H5 MIR373-201ENST00000362273 69 ntBASIC1.49□□□□□ -2.17
USP35Q9P2H5 Y_RNA.30-201ENST00000362572 97 ntBASIC1.49□□□□□ -2.17
USP35Q9P2H5 Y_RNA.270-201ENST00000364693 104 ntBASIC1.49□□□□□ -2.17
USP35Q9P2H5 RNU6-597P-201ENST00000365620 102 ntBASIC1.49□□□□□ -2.17
USP35Q9P2H5 RNU6-209P-201ENST00000384118 107 ntBASIC1.49□□□□□ -2.17
USP35Q9P2H5 RNU6-125P-201ENST00000384505 107 ntBASIC1.49□□□□□ -2.17
USP35Q9P2H5 MIR624-201ENST00000385217 97 ntBASIC1.49□□□□□ -2.17
USP35Q9P2H5 RNU6-1135P-201ENST00000411083 103 ntBASIC1.49□□□□□ -2.17
USP35Q9P2H5 SEPT7P4-201ENST00000437076 306 ntBASIC1.49□□□□□ -2.17
USP35Q9P2H5 MIR376A2-201ENST00000636782 80 ntBASIC1.49□□□□□ -2.17
USP35Q9P2H5 Y_RNA.180-201ENST00000363867 113 ntBASIC1.48□□□□□ -2.17
USP35Q9P2H5 SNORA25.7-201ENST00000364375 127 ntBASIC1.48□□□□□ -2.17
USP35Q9P2H5 Y_RNA.351-201ENST00000365436 96 ntBASIC1.48□□□□□ -2.17
USP35Q9P2H5 RNA5SP261-201ENST00000410536 106 ntBASIC1.48□□□□□ -2.17
USP35Q9P2H5 Y_RNA.662-201ENST00000516028 97 ntBASIC1.48□□□□□ -2.17
USP35Q9P2H5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.48□□□□□ -2.17
USP35Q9P2H5 RNU6-818P-201ENST00000364837 108 ntBASIC1.47□□□□□ -2.17
USP35Q9P2H5 SNORA2B-201ENST00000384583 137 ntBASIC1.47□□□□□ -2.17
USP35Q9P2H5 SNORD38B-201ENST00000384690 67 ntBASIC1.47□□□□□ -2.17
USP35Q9P2H5 RNU6-394P-201ENST00000410735 107 ntBASIC1.47□□□□□ -2.17
USP35Q9P2H5 PDCD5P2-201ENST00000507570 312 ntBASIC1.47□□□□□ -2.17
USP35Q9P2H5 AC104465.1-201ENST00000611365 139 ntBASIC1.47□□□□□ -2.17
USP35Q9P2H5 SNORD38B-202ENST00000625943 69 ntBASIC1.47□□□□□ -2.17
USP35Q9P2H5 SNORA1.1-201ENST00000364671 133 ntBASIC1.46□□□□□ -2.18
USP35Q9P2H5 Y_RNA.441-201ENST00000384123 112 ntBASIC1.46□□□□□ -2.18
USP35Q9P2H5 RNU6-804P-201ENST00000384286 107 ntBASIC1.46□□□□□ -2.18
USP35Q9P2H5 RNU6-255P-201ENST00000516957 105 ntBASIC1.46□□□□□ -2.18
USP35Q9P2H5 AC211469.2-201ENST00000605461 205 ntBASIC1.46□□□□□ -2.18
USP35Q9P2H5 MIR302B-201ENST00000362188 73 ntBASIC1.45□□□□□ -2.18
USP35Q9P2H5 MIR216A-201ENST00000385063 110 ntBASIC1.45□□□□□ -2.18
USP35Q9P2H5 AC090844.1-201ENST00000422019 156 ntBASIC1.45□□□□□ -2.18
USP35Q9P2H5 AC067940.1-201ENST00000458411 300 ntBASIC1.45□□□□□ -2.18
USP35Q9P2H5 U7.7-201ENST00000459276 60 ntBASIC1.45□□□□□ -2.18
USP35Q9P2H5 AC021753.1-201ENST00000635724 168 ntBASIC1.45□□□□□ -2.18
USP35Q9P2H5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
USP35Q9P2H5 RNU6-1130P-201ENST00000365434 107 ntBASIC1.44□□□□□ -2.18
USP35Q9P2H5 AC006461.1-201ENST00000412637 326 ntBASIC1.44□□□□□ -2.18
USP35Q9P2H5 AC107027.2-201ENST00000512197 115 ntBASIC1.44□□□□□ -2.18
USP35Q9P2H5 RNA5SP255-201ENST00000516370 107 ntBASIC1.44□□□□□ -2.18
USP35Q9P2H5 MTND5P41-201ENST00000517498 206 ntBASIC1.44□□□□□ -2.18
USP35Q9P2H5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.44□□□□□ -2.18
USP35Q9P2H5 Y_RNA.8-201ENST00000362353 102 ntBASIC1.43□□□□□ -2.18
USP35Q9P2H5 RNU4-84P-201ENST00000364200 139 ntBASIC1.43□□□□□ -2.18
USP35Q9P2H5 RNA5SP95-201ENST00000410319 137 ntBASIC1.43□□□□□ -2.18
USP35Q9P2H5 RNU6-994P-201ENST00000410507 111 ntBASIC1.43□□□□□ -2.18
USP35Q9P2H5 AC244023.1-201ENST00000426884 112 ntBASIC1.43□□□□□ -2.18
USP35Q9P2H5 RNU6-1110P-201ENST00000516462 101 ntBASIC1.43□□□□□ -2.18
USP35Q9P2H5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.43□□□□□ -2.18
USP35Q9P2H5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.43□□□□□ -2.18
USP35Q9P2H5 MIR3144-201ENST00000579460 79 ntBASIC1.43□□□□□ -2.18
USP35Q9P2H5 MIR3973-201ENST00000579824 107 ntBASIC1.43□□□□□ -2.18
USP35Q9P2H5 AC242498.1-201ENST00000604134 111 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms