Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
SMARCAL1Q9NZC9 AC048334.1-201ENST00000477975 159 ntBASIC1.22□□□□□ -2.21
SMARCAL1Q9NZC9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.22□□□□□ -2.21
SMARCAL1Q9NZC9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.22□□□□□ -2.21
SMARCAL1Q9NZC9 AL022345.2-201ENST00000606307 135 ntBASIC1.22□□□□□ -2.21
SMARCAL1Q9NZC9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SMARCAL1Q9NZC9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMARCAL1Q9NZC9 SNORA25.9-201ENST00000365087 128 ntBASIC1.21□□□□□ -2.22
SMARCAL1Q9NZC9 Y_RNA.454-201ENST00000384224 113 ntBASIC1.21□□□□□ -2.22
SMARCAL1Q9NZC9 MIR613-201ENST00000385248 95 ntBASIC1.21□□□□□ -2.22
SMARCAL1Q9NZC9 AL603914.1-201ENST00000401964 204 ntBASIC1.21□□□□□ -2.22
SMARCAL1Q9NZC9 snoU13.16-201ENST00000459350 104 ntBASIC1.21□□□□□ -2.22
SMARCAL1Q9NZC9 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
SMARCAL1Q9NZC9 AP001340.1-201ENST00000624405 217 ntBASIC1.21□□□□□ -2.22
SMARCAL1Q9NZC9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
SMARCAL1Q9NZC9 RNA5SP48-201ENST00000363969 126 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 RNU6-704P-201ENST00000364162 103 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 RNU4-16P-201ENST00000364737 141 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 MIR1302-7-201ENST00000408841 72 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 AC090844.1-201ENST00000422019 156 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 RNU7-73P-201ENST00000458743 63 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 RNU7-53P-201ENST00000516705 60 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 AC091895.1-201ENST00000624494 256 ntBASIC1.2□□□□□ -2.22
SMARCAL1Q9NZC9 RNU6-349P-201ENST00000362402 107 ntBASIC1.19□□□□□ -2.22
SMARCAL1Q9NZC9 MIR499A-201ENST00000384903 122 ntBASIC1.19□□□□□ -2.22
SMARCAL1Q9NZC9 SNORA40-201ENST00000388090 126 ntBASIC1.19□□□□□ -2.22
SMARCAL1Q9NZC9 Y_RNA.586-201ENST00000391146 98 ntBASIC1.19□□□□□ -2.22
SMARCAL1Q9NZC9 MTATP6P21-201ENST00000440681 189 ntBASIC1.19□□□□□ -2.22
SMARCAL1Q9NZC9 SNORA31.2-201ENST00000516019 134 ntBASIC1.19□□□□□ -2.22
SMARCAL1Q9NZC9 MIR3121-201ENST00000579680 77 ntBASIC1.19□□□□□ -2.22
SMARCAL1Q9NZC9 MIR8055-201ENST00000610739 97 ntBASIC1.19□□□□□ -2.22
SMARCAL1Q9NZC9 MIR8070-201ENST00000616510 88 ntBASIC1.19□□□□□ -2.22
SMARCAL1Q9NZC9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 SNORD50.2-201ENST00000365465 70 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 RNY1P6-201ENST00000384193 109 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 MIR1185-1-201ENST00000408598 86 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 AC245047.7-201ENST00000440265 293 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 RNU6-240P-201ENST00000516098 97 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 Y_RNA.692-201ENST00000516627 105 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 AC108081.1-201ENST00000604358 221 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 AL020996.3-201ENST00000606617 222 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 AC011603.4-201ENST00000611325 277 ntBASIC1.18□□□□□ -2.22
SMARCAL1Q9NZC9 MIR103A2-201ENST00000362154 78 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 RNA5SP264-201ENST00000363115 107 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 RNU6-690P-201ENST00000365242 106 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 SNORA26.6-201ENST00000391256 115 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 RNU6-1211P-201ENST00000459179 105 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 RNU6-971P-201ENST00000516920 106 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 AP003716.2-201ENST00000528260 108 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 U7.2-201ENST00000607576 63 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 MIR8065-201ENST00000620577 100 ntBASIC1.17□□□□□ -2.22
SMARCAL1Q9NZC9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SMARCAL1Q9NZC9 Y_RNA.114-201ENST00000363265 113 ntBASIC1.16□□□□□ -2.22
SMARCAL1Q9NZC9 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
SMARCAL1Q9NZC9 MIR6717-201ENST00000622747 73 ntBASIC1.16□□□□□ -2.22
SMARCAL1Q9NZC9 AC021613.1-201ENST00000623880 111 ntBASIC1.16□□□□□ -2.22
SMARCAL1Q9NZC9 SNORA1.1-201ENST00000364671 133 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 Y_RNA.366-201ENST00000365540 102 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-910P-201ENST00000390844 107 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-1319P-201ENST00000390855 104 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-747P-201ENST00000390928 104 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-241P-201ENST00000391148 104 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-177P-201ENST00000411257 104 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 AL392103.1-201ENST00000447000 198 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 IGKV1-22-201ENST00000524313 326 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 MIR3910-1-201ENST00000580936 111 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 TUG1_4.1-201ENST00000619464 181 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 Z97988.1-201ENST00000637697 135 ntBASIC1.15□□□□□ -2.23
SMARCAL1Q9NZC9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
SMARCAL1Q9NZC9 RNA5SP327-201ENST00000362494 101 ntBASIC1.14□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-235P-201ENST00000362644 107 ntBASIC1.14□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-654P-201ENST00000364373 107 ntBASIC1.14□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-602P-201ENST00000411155 105 ntBASIC1.14□□□□□ -2.23
SMARCAL1Q9NZC9 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
SMARCAL1Q9NZC9 Y_RNA.757-201ENST00000578934 114 ntBASIC1.14□□□□□ -2.23
SMARCAL1Q9NZC9 MIR6516-201ENST00000630554 81 ntBASIC1.14□□□□□ -2.23
SMARCAL1Q9NZC9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-392P-201ENST00000364926 101 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 SNORA75.2-201ENST00000391138 150 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 SNORA75.3-201ENST00000391231 150 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 RNA5SP95-201ENST00000410319 137 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 RPS3AP1-201ENST00000413190 320 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 AC244023.1-201ENST00000426884 112 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-113P-201ENST00000516653 101 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-1234P-201ENST00000516877 103 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 RNU6-1258P-201ENST00000516911 111 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 AC133485.4-201ENST00000561835 220 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 AC138907.4-201ENST00000570107 226 ntBASIC1.13□□□□□ -2.23
SMARCAL1Q9NZC9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms