Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 MIR4771-2-201ENST00000577758 74 ntBASIC0.77□□□□□ -2.29
CHMP1AQ9HD42 MIR4771-1-201ENST00000582617 74 ntBASIC0.77□□□□□ -2.29
CHMP1AQ9HD42 AC020891.4-201ENST00000605745 93 ntBASIC0.77□□□□□ -2.29
CHMP1AQ9HD42 AC010332.2-201ENST00000613083 1904 ntBASIC0.77□□□□□ -2.29
CHMP1AQ9HD42 SNORA25.7-201ENST00000364375 127 ntBASIC0.76□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.297-201ENST00000364950 91 ntBASIC0.76□□□□□ -2.29
CHMP1AQ9HD42 RNU6-597P-201ENST00000365620 102 ntBASIC0.76□□□□□ -2.29
CHMP1AQ9HD42 RNU6-1165P-201ENST00000410119 107 ntBASIC0.76□□□□□ -2.29
CHMP1AQ9HD42 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.430-201ENST00000384081 110 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.521-201ENST00000384560 114 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 RNU6-768P-201ENST00000384683 107 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.644-201ENST00000459006 113 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.674-201ENST00000516362 113 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 RNU6-388P-201ENST00000517012 105 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 RNU6-389P-201ENST00000517048 105 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 RMST_2.1-201ENST00000617263 136 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 MTND5P32-201ENST00000560711 1802 ntBASIC0.75□□□□□ -2.29
CHMP1AQ9HD42 MIR30D-201ENST00000362283 70 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 RNU6-312P-201ENST00000364629 107 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 RNU1-133P-201ENST00000364867 167 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.327-201ENST00000365201 102 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 RNA5SP261-201ENST00000410536 106 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 AC244098.3-201ENST00000424803 96 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 MIR18B-201ENST00000454574 71 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 MIR4804-201ENST00000581683 73 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 MIR4676-201ENST00000583078 72 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 AC104465.1-201ENST00000611365 139 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 MIR6841-201ENST00000637129 72 ntBASIC0.74□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.354-201ENST00000365448 111 ntBASIC0.73□□□□□ -2.29
CHMP1AQ9HD42 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.393-201ENST00000383936 102 ntBASIC0.73□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.515-201ENST00000384535 112 ntBASIC0.73□□□□□ -2.29
CHMP1AQ9HD42 RNU6-977P-201ENST00000516411 103 ntBASIC0.73□□□□□ -2.29
CHMP1AQ9HD42 RNU7-70P-201ENST00000516941 66 ntBASIC0.73□□□□□ -2.29
CHMP1AQ9HD42 AC011195.1-201ENST00000578177 177 ntBASIC0.73□□□□□ -2.29
CHMP1AQ9HD42 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.73□□□□□ -2.29
CHMP1AQ9HD42 AC021613.1-201ENST00000623880 111 ntBASIC0.73□□□□□ -2.29
CHMP1AQ9HD42 RNU6-1082P-201ENST00000364574 107 ntBASIC0.72□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.552-201ENST00000384665 112 ntBASIC0.72□□□□□ -2.29
CHMP1AQ9HD42 MIR520F-201ENST00000384824 87 ntBASIC0.72□□□□□ -2.29
CHMP1AQ9HD42 RNU6-482P-201ENST00000391068 107 ntBASIC0.72□□□□□ -2.29
CHMP1AQ9HD42 MIR3152-201ENST00000579801 74 ntBASIC0.72□□□□□ -2.29
CHMP1AQ9HD42 MIR4524B-201ENST00000581569 115 ntBASIC0.72□□□□□ -2.29
CHMP1AQ9HD42 Y_RNA.52-201ENST00000362760 96 ntBASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 Y_RNA.476-201ENST00000384347 108 ntBASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 MIR520H-201ENST00000385126 88 ntBASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 RNU1-119P-201ENST00000391122 165 ntBASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 RNU7-56P-201ENST00000458744 62 ntBASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 AC107027.2-201ENST00000512197 115 ntBASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 RNU6-138P-201ENST00000515952 107 ntBASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 AC072026.1-201ENST00000605023 201 ntBASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
CHMP1AQ9HD42 SNORA22.1-201ENST00000362701 134 ntBASIC0.7□□□□□ -2.3
CHMP1AQ9HD42 RNU6-200P-201ENST00000364743 107 ntBASIC0.7□□□□□ -2.3
CHMP1AQ9HD42 MIR532-201ENST00000385025 91 ntBASIC0.7□□□□□ -2.3
CHMP1AQ9HD42 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
CHMP1AQ9HD42 RNU7-185P-201ENST00000459215 60 ntBASIC0.7□□□□□ -2.3
CHMP1AQ9HD42 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
CHMP1AQ9HD42 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
CHMP1AQ9HD42 RNU4-16P-201ENST00000364737 141 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 RNU6-53P-201ENST00000365367 106 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 RNU6-110P-201ENST00000384508 104 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 SNORA20-201ENST00000384662 132 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 MT-TF-201ENST00000387314 71 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 Y_RNA.793-201ENST00000411222 111 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 RNA5SP236-201ENST00000516169 116 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 AP002392.1-201ENST00000537692 208 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 FAM71BP1-201ENST00000604431 523 ntBASIC0.69□□□□□ -2.3
CHMP1AQ9HD42 Y_RNA.337-201ENST00000365312 102 ntBASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 RNU6-1237P-201ENST00000384777 107 ntBASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 MIR573-201ENST00000384964 99 ntBASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 MIR125B2-201ENST00000385128 89 ntBASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 MIR938-201ENST00000401216 83 ntBASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 RNU5E-9P-201ENST00000411164 104 ntBASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 RNA5SP458-201ENST00000516188 119 ntBASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 RNU6-1258P-201ENST00000516911 111 ntBASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 MIR6857-201ENST00000613267 93 ntBASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 AL662814.1-201ENST00000617364 121 ntBASIC0.68□□□□□ -2.3
CHMP1AQ9HD42 RNU6-349P-201ENST00000362402 107 ntBASIC0.67□□□□□ -2.3
CHMP1AQ9HD42 RNU4-84P-201ENST00000364200 139 ntBASIC0.67□□□□□ -2.3
CHMP1AQ9HD42 Y_RNA.240-201ENST00000364469 95 ntBASIC0.67□□□□□ -2.3
CHMP1AQ9HD42 MIR1257-201ENST00000408490 117 ntBASIC0.67□□□□□ -2.3
CHMP1AQ9HD42 RNU7-120P-201ENST00000459334 63 ntBASIC0.67□□□□□ -2.3
CHMP1AQ9HD42 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.67□□□□□ -2.3
CHMP1AQ9HD42 AC008608.1-201ENST00000603910 127 ntBASIC0.67□□□□□ -2.3
CHMP1AQ9HD42 MIR6715A-201ENST00000615929 79 ntBASIC0.67□□□□□ -2.3
CHMP1AQ9HD42 SNORD114-27-201ENST00000363766 70 ntBASIC0.66□□□□□ -2.3
CHMP1AQ9HD42 RNU6-682P-201ENST00000363843 106 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms