Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 RNU6-747P-201ENST00000390928 104 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 RNU6-241P-201ENST00000391148 104 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 MIR1263-201ENST00000408324 86 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 RNA5SP261-201ENST00000410536 106 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 RNU6-177P-201ENST00000411257 104 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 AL445685.2-201ENST00000422551 342 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 AC245047.7-201ENST00000440265 293 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 AC048334.1-201ENST00000477975 159 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 RN7SKP19-201ENST00000516016 252 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 MIR6717-201ENST00000622747 73 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 Z97988.1-201ENST00000637697 135 ntBASIC1.84□□□□□ -2.11
TRIM55Q9BYV6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 RNA5SP264-201ENST00000363115 107 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 RNU6-647P-201ENST00000364243 107 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 SNORA1.1-201ENST00000364671 133 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 SNORD58C-201ENST00000365223 64 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 Y_RNA.353-201ENST00000365440 108 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 SNORA17.3-201ENST00000391159 129 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 Y_RNA.629-201ENST00000411368 105 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 AC003989.2-201ENST00000440224 169 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 SNORA31.2-201ENST00000516019 134 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 SNORD33.1-201ENST00000516213 88 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 MIR6129-201ENST00000616087 109 ntBASIC1.83□□□□□ -2.12
TRIM55Q9BYV6 MIR103A2-201ENST00000362154 78 ntBASIC1.82□□□□□ -2.12
TRIM55Q9BYV6 RNU6-1325P-201ENST00000364905 105 ntBASIC1.82□□□□□ -2.12
TRIM55Q9BYV6 MIR1185-1-201ENST00000408598 86 ntBASIC1.82□□□□□ -2.12
TRIM55Q9BYV6 RNA5SP247-201ENST00000411181 105 ntBASIC1.82□□□□□ -2.12
TRIM55Q9BYV6 AC090844.1-201ENST00000422019 156 ntBASIC1.82□□□□□ -2.12
TRIM55Q9BYV6 AC108667.1-201ENST00000428618 249 ntBASIC1.82□□□□□ -2.12
TRIM55Q9BYV6 RNA5SP182-201ENST00000516064 82 ntBASIC1.82□□□□□ -2.12
TRIM55Q9BYV6 RN7SKP179-201ENST00000516126 217 ntBASIC1.82□□□□□ -2.12
TRIM55Q9BYV6 MIR3152-201ENST00000579801 74 ntBASIC1.82□□□□□ -2.12
TRIM55Q9BYV6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM55Q9BYV6 RNU6-44P-201ENST00000384045 107 ntBASIC1.81□□□□□ -2.12
TRIM55Q9BYV6 Y_RNA.712-201ENST00000517011 92 ntBASIC1.81□□□□□ -2.12
TRIM55Q9BYV6 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
TRIM55Q9BYV6 AC021443.1-201ENST00000604478 211 ntBASIC1.81□□□□□ -2.12
TRIM55Q9BYV6 MIR8065-201ENST00000620577 100 ntBASIC1.81□□□□□ -2.12
TRIM55Q9BYV6 MIR6841-201ENST00000637129 72 ntBASIC1.81□□□□□ -2.12
TRIM55Q9BYV6 MIR3914-2-201ENST00000637339 95 ntBASIC1.81□□□□□ -2.12
TRIM55Q9BYV6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRIM55Q9BYV6 Y_RNA.273-201ENST00000364703 102 ntBASIC1.8□□□□□ -2.12
TRIM55Q9BYV6 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
TRIM55Q9BYV6 Y_RNA.430-201ENST00000384081 110 ntBASIC1.8□□□□□ -2.12
TRIM55Q9BYV6 RNU6-429P-201ENST00000384582 108 ntBASIC1.8□□□□□ -2.12
TRIM55Q9BYV6 Y_RNA.617-201ENST00000410920 90 ntBASIC1.8□□□□□ -2.12
TRIM55Q9BYV6 RPS3AP1-201ENST00000413190 320 ntBASIC1.8□□□□□ -2.12
TRIM55Q9BYV6 MIR3683-201ENST00000580847 82 ntBASIC1.8□□□□□ -2.12
TRIM55Q9BYV6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.8□□□□□ -2.12
TRIM55Q9BYV6 AL137067.1-201ENST00000615933 120 ntBASIC1.8□□□□□ -2.12
TRIM55Q9BYV6 SNORA22.1-201ENST00000362701 134 ntBASIC1.79□□□□□ -2.12
TRIM55Q9BYV6 MIR548A1-201ENST00000385041 97 ntBASIC1.79□□□□□ -2.12
TRIM55Q9BYV6 RNA5SP144-201ENST00000410846 116 ntBASIC1.79□□□□□ -2.12
TRIM55Q9BYV6 POLR2J4-204ENST00000418424 324 ntBASIC1.79□□□□□ -2.12
TRIM55Q9BYV6 AC108729.3-201ENST00000513484 108 ntBASIC1.79□□□□□ -2.12
TRIM55Q9BYV6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM55Q9BYV6 MIR4305-201ENST00000583252 102 ntBASIC1.79□□□□□ -2.12
TRIM55Q9BYV6 AC025166.1-201ENST00000612411 163 ntBASIC1.79□□□□□ -2.12
TRIM55Q9BYV6 RNU6-215P-201ENST00000365169 102 ntBASIC1.78□□□□□ -2.12
TRIM55Q9BYV6 RNU6-396P-201ENST00000365369 105 ntBASIC1.78□□□□□ -2.12
TRIM55Q9BYV6 RNU6-1056P-201ENST00000383996 107 ntBASIC1.78□□□□□ -2.12
TRIM55Q9BYV6 RNU6-476P-201ENST00000384726 107 ntBASIC1.78□□□□□ -2.12
TRIM55Q9BYV6 RNU6-1064P-201ENST00000410626 104 ntBASIC1.78□□□□□ -2.12
TRIM55Q9BYV6 RNU6-602P-201ENST00000411155 105 ntBASIC1.78□□□□□ -2.12
TRIM55Q9BYV6 RNU11-2P-201ENST00000516898 142 ntBASIC1.78□□□□□ -2.12
TRIM55Q9BYV6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM55Q9BYV6 MIR4498-201ENST00000577599 66 ntBASIC1.78□□□□□ -2.12
TRIM55Q9BYV6 AL161722.3-201ENST00000605789 2983 ntBASIC1.77□□□□□ -2.13
TRIM55Q9BYV6 Y_RNA.81-201ENST00000362997 102 ntBASIC1.77□□□□□ -2.13
TRIM55Q9BYV6 AL035461.1-201ENST00000421490 332 ntBASIC1.77□□□□□ -2.13
TRIM55Q9BYV6 RNU7-164P-201ENST00000459221 62 ntBASIC1.77□□□□□ -2.13
TRIM55Q9BYV6 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
TRIM55Q9BYV6 MTND5P18-201ENST00000445624 1801 ntBASIC1.77□□□□□ -2.13
TRIM55Q9BYV6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 SNORA63.4-201ENST00000362763 126 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 RNA5SP190-201ENST00000365222 118 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 Y_RNA.528-201ENST00000384575 108 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 SNORD38B-201ENST00000384690 67 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 Y_RNA.563-201ENST00000384707 108 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 MIR548A3-201ENST00000385297 97 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 MTATP6P29-201ENST00000415057 132 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 RNU6-893P-201ENST00000458841 100 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 RNU7-123P-201ENST00000515911 60 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 RNU2-35P-201ENST00000516446 142 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 MIR2115-201ENST00000516657 100 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 SNORD38B-202ENST00000625943 69 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 MIR6516-201ENST00000630554 81 ntBASIC1.76□□□□□ -2.13
TRIM55Q9BYV6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
TRIM55Q9BYV6 RNU6-1144P-201ENST00000384247 104 ntBASIC1.75□□□□□ -2.13
TRIM55Q9BYV6 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
TRIM55Q9BYV6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 1840.9 ms