Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 Y_RNA.344-201ENST00000365381 112 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 Y_RNA.362-201ENST00000365518 110 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 RNU7-73P-201ENST00000458743 63 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 SNORA77B-201ENST00000578179 125 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AL020996.3-201ENST00000606617 222 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AC106754.2-201ENST00000623006 233 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 RNU6-554P-201ENST00000410466 106 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 JTBP1-201ENST00000441314 247 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 MIR1270-201ENST00000459320 83 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 RNU6-958P-201ENST00000516995 106 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 AC004812.1-201ENST00000540773 146 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 AC103810.8-201ENST00000607347 118 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 RNU6-94P-201ENST00000607728 107 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 AC243994.1-201ENST00000618627 109 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 RNY4P6-201ENST00000363667 96 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 MIR548D2-201ENST00000384955 97 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 AC107297.1-201ENST00000459991 176 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 RPS23P4-201ENST00000487908 423 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 MIR8055-201ENST00000610739 97 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 AC087741.2-201ENST00000619415 172 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 MIR302B-201ENST00000362188 73 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 MIR450A1-201ENST00000362262 91 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 SNORD115-2-201ENST00000362842 82 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 SNORD115-20-201ENST00000365099 82 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 SNORD41-201ENST00000386967 70 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 RNU7-67P-201ENST00000459003 62 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 RNU6-412P-201ENST00000516434 106 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 RNU7-53P-201ENST00000516705 60 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 SNORA44.1-201ENST00000517031 108 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 AC015688.6-201ENST00000577737 104 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 MIR4764-201ENST00000580680 88 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 AP000942.3-201ENST00000603702 160 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 MIR6717-201ENST00000622747 73 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 RNU6-661P-201ENST00000362409 107 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 SNORA63.5-201ENST00000363548 123 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNU6-414P-201ENST00000363705 104 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 SNORA70.7-201ENST00000384159 133 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNA5SP89-201ENST00000410300 108 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 HMGN1P33-201ENST00000432945 451 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNU7-43P-201ENST00000516554 64 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 MIR3163-201ENST00000581592 73 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 SNORA22.1-201ENST00000362701 134 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 U8.6-201ENST00000364939 135 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 MIR513A1-201ENST00000385138 129 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 AL022718.1-201ENST00000412004 84 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 RPL39P34-201ENST00000477141 156 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 AC008834.1-201ENST00000511612 175 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 RNU7-41P-201ENST00000515917 61 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 SNORD53B-201ENST00000577887 78 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 AC008133.2-201ENST00000624540 351 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 SNORD115-19-201ENST00000363098 82 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 SNORD115-18-201ENST00000363293 82 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 SNORD115-17-201ENST00000364612 82 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 SNORA51.10-201ENST00000384418 136 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 SNORA67.6-201ENST00000391093 99 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AC108667.1-201ENST00000428618 249 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AL603825.1-201ENST00000438481 80 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AL031737.1-201ENST00000450125 223 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 snoU13.16-201ENST00000459350 104 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AC113410.1-201ENST00000505029 247 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 RNU6-168P-201ENST00000516189 101 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 RNU6-537P-201ENST00000517277 103 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AC068339.1-201ENST00000526965 141 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AL589743.1-201ENST00000551932 2712 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 MIR302D-201ENST00000362275 68 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 MIR520C-201ENST00000385005 87 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms