Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 PDCD5P2-201ENST00000507570 312 ntBASIC1.91□□□□□ -2.1
KRT40Q6A162 MIR4305-201ENST00000583252 102 ntBASIC1.91□□□□□ -2.1
KRT40Q6A162 AL512598.1-201ENST00000610158 273 ntBASIC1.91□□□□□ -2.1
KRT40Q6A162 AL773524.1-201ENST00000614065 229 ntBASIC1.91□□□□□ -2.1
KRT40Q6A162 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
KRT40Q6A162 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
KRT40Q6A162 RNU6-1190P-201ENST00000410811 104 ntBASIC1.9□□□□□ -2.11
KRT40Q6A162 RNU7-164P-201ENST00000459221 62 ntBASIC1.9□□□□□ -2.11
KRT40Q6A162 SNORA74.3-201ENST00000517108 154 ntBASIC1.9□□□□□ -2.11
KRT40Q6A162 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.9□□□□□ -2.11
KRT40Q6A162 MIR6779-201ENST00000617283 64 ntBASIC1.9□□□□□ -2.11
KRT40Q6A162 Y_RNA.198-201ENST00000364013 98 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 SNORA1.2-201ENST00000365189 134 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 SNORA22-201ENST00000383907 134 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 RNU6-880P-201ENST00000384526 107 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 Y_RNA.549-201ENST00000384657 102 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 RNU6-913P-201ENST00000390913 95 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 SNORA26.6-201ENST00000391256 115 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 RNA5SP144-201ENST00000410846 116 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 AC244636.1-201ENST00000421152 228 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 AL035398.1-201ENST00000430869 322 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.89□□□□□ -2.11
KRT40Q6A162 MIR4255-201ENST00000579351 72 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 AC012493.3-201ENST00000604494 112 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 AL645939.4-201ENST00000604495 135 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 MIR4791-201ENST00000607666 84 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 AL035470.1-201ENST00000622571 220 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 AC021613.1-201ENST00000623880 111 ntBASIC1.89□□□□□ -2.11
KRT40Q6A162 POLR2J4-204ENST00000418424 324 ntBASIC1.88□□□□□ -2.11
KRT40Q6A162 JTBP1-201ENST00000441314 247 ntBASIC1.88□□□□□ -2.11
KRT40Q6A162 RPS29P29-201ENST00000456396 171 ntBASIC1.88□□□□□ -2.11
KRT40Q6A162 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.88□□□□□ -2.11
KRT40Q6A162 RNU6-1258P-201ENST00000516911 111 ntBASIC1.88□□□□□ -2.11
KRT40Q6A162 AC007012.1-201ENST00000567192 175 ntBASIC1.88□□□□□ -2.11
KRT40Q6A162 SNORA77B-201ENST00000578179 125 ntBASIC1.88□□□□□ -2.11
KRT40Q6A162 MIR502-201ENST00000606349 86 ntBASIC1.88□□□□□ -2.11
KRT40Q6A162 MIR6734-201ENST00000621166 68 ntBASIC1.88□□□□□ -2.11
KRT40Q6A162 RNU6-392P-201ENST00000364926 101 ntBASIC1.87□□□□□ -2.11
KRT40Q6A162 RNA5SP363-201ENST00000365072 115 ntBASIC1.87□□□□□ -2.11
KRT40Q6A162 MIR653-201ENST00000385279 96 ntBASIC1.87□□□□□ -2.11
KRT40Q6A162 RPL23AP6-201ENST00000446637 472 ntBASIC1.87□□□□□ -2.11
KRT40Q6A162 RNU6-958P-201ENST00000516995 106 ntBASIC1.87□□□□□ -2.11
KRT40Q6A162 AL078603.1-201ENST00000603824 313 ntBASIC1.87□□□□□ -2.11
KRT40Q6A162 RMST_2.1-201ENST00000617263 136 ntBASIC1.87□□□□□ -2.11
KRT40Q6A162 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.87□□□□□ -2.11
KRT40Q6A162 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.87□□□□□ -2.11
KRT40Q6A162 MIR6841-201ENST00000637129 72 ntBASIC1.87□□□□□ -2.11
KRT40Q6A162 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.86□□□□□ -2.11
KRT40Q6A162 Y_RNA.191-201ENST00000363972 113 ntBASIC1.86□□□□□ -2.11
KRT40Q6A162 Y_RNA.281-201ENST00000364774 94 ntBASIC1.86□□□□□ -2.11
KRT40Q6A162 AL512326.2-201ENST00000426359 151 ntBASIC1.86□□□□□ -2.11
KRT40Q6A162 RNU7-67P-201ENST00000459003 62 ntBASIC1.86□□□□□ -2.11
KRT40Q6A162 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
KRT40Q6A162 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.86□□□□□ -2.11
KRT40Q6A162 MIR4452-201ENST00000583004 71 ntBASIC1.86□□□□□ -2.11
KRT40Q6A162 AC243994.1-201ENST00000618627 109 ntBASIC1.86□□□□□ -2.11
KRT40Q6A162 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRT40Q6A162 MIR302B-201ENST00000362188 73 ntBASIC1.85□□□□□ -2.11
KRT40Q6A162 MIR513A1-201ENST00000385138 129 ntBASIC1.85□□□□□ -2.11
KRT40Q6A162 SNORD41-201ENST00000386967 70 ntBASIC1.85□□□□□ -2.11
KRT40Q6A162 RNU7-73P-201ENST00000458743 63 ntBASIC1.85□□□□□ -2.11
KRT40Q6A162 AC107297.1-201ENST00000459991 176 ntBASIC1.85□□□□□ -2.11
KRT40Q6A162 RNA5SP220-201ENST00000516298 104 ntBASIC1.85□□□□□ -2.11
KRT40Q6A162 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
KRT40Q6A162 AC015688.6-201ENST00000577737 104 ntBASIC1.85□□□□□ -2.11
KRT40Q6A162 AL020996.3-201ENST00000606617 222 ntBASIC1.85□□□□□ -2.11
KRT40Q6A162 AC103810.8-201ENST00000607347 118 ntBASIC1.85□□□□□ -2.11
KRT40Q6A162 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.84□□□□□ -2.11
KRT40Q6A162 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRT40Q6A162 AC008555.8-201ENST00000623602 2168 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRT40Q6A162 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRT40Q6A162 SNORD114-26-201ENST00000363543 72 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 RNU6-414P-201ENST00000363705 104 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 Y_RNA.171-201ENST00000363760 102 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 RNU1-42P-201ENST00000364033 160 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 Y_RNA.537-201ENST00000384626 109 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
KRT40Q6A162 RNU6-1319P-201ENST00000390855 104 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 RNU6-747P-201ENST00000390928 104 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 RNU6-241P-201ENST00000391148 104 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 RNU6-177P-201ENST00000411257 104 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 HMGN1P33-201ENST00000432945 451 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 MIR4764-201ENST00000580680 88 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
KRT40Q6A162 Y_RNA.362-201ENST00000365518 110 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 RNA5SP259-201ENST00000365541 109 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 RNU6-147P-201ENST00000383983 107 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 SNORA70.7-201ENST00000384159 133 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 AC009474.2-201ENST00000451383 136 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.83□□□□□ -2.12
KRT40Q6A162 RNU7-43P-201ENST00000516554 64 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 RNU7-53P-201ENST00000516705 60 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 RNA5SP102-201ENST00000516865 106 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 AC004812.1-201ENST00000540773 146 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 MIR6717-201ENST00000622747 73 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 AC008133.2-201ENST00000624540 351 ntBASIC1.83□□□□□ -2.12
KRT40Q6A162 Y_RNA.85-201ENST00000363014 111 ntBASIC1.82□□□□□ -2.12
KRT40Q6A162 Y_RNA.213-201ENST00000364178 111 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms