Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AL449363.1-201ENST00000617815 186 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 AC073476.4-201ENST00000628409 72 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 RNA5SP383-201ENST00000362934 120 ntBASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 RNU6-132P-201ENST00000383863 107 ntBASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 RNU6-1237P-201ENST00000384777 107 ntBASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 RNU6-75P-201ENST00000515944 104 ntBASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 RNA5SP385-201ENST00000515947 110 ntBASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 AC007318.2-201ENST00000620999 243 ntBASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 AL513423.1-201ENST00000621695 132 ntBASIC2.72□□□□□ -1.97
RNFT1Q5M7Z0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.97
RNFT1Q5M7Z0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 MIR148B-201ENST00000362252 99 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 RNU1-109P-201ENST00000383960 147 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 RNU6-949P-201ENST00000384040 107 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 RNA5SP237-201ENST00000410414 113 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 RN7SKP123-201ENST00000410732 291 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 RN7SL20P-201ENST00000488827 297 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 RNU7-43P-201ENST00000516554 64 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 AC104027.1-201ENST00000521887 300 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 MIR4500-201ENST00000579472 76 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
RNFT1Q5M7Z0 AP000648.3-201ENST00000623539 4507 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 AL161431.1-201ENST00000618966 4205 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 SNORD36A-201ENST00000362874 73 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 SNORA25.4-201ENST00000363666 124 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 Y_RNA.283-201ENST00000364798 112 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 SNORD38B-201ENST00000384690 67 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 MIR660-201ENST00000385235 97 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 GTF3AP2-201ENST00000557014 266 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 AC138749.4-201ENST00000563970 127 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 MIR4513-201ENST00000581077 86 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 AL662814.1-201ENST00000617364 121 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 AC008133.2-201ENST00000624540 351 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 SNORD38B-202ENST00000625943 69 ntBASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RNFT1Q5M7Z0 RNU1-58P-201ENST00000362413 163 ntBASIC2.69□□□□□ -1.98
RNFT1Q5M7Z0 RNU6-630P-201ENST00000391258 106 ntBASIC2.69□□□□□ -1.98
RNFT1Q5M7Z0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.69□□□□□ -1.98
RNFT1Q5M7Z0 MIR4672-201ENST00000583126 81 ntBASIC2.69□□□□□ -1.98
RNFT1Q5M7Z0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNFT1Q5M7Z0 RNU4-82P-201ENST00000362443 140 ntBASIC2.68□□□□□ -1.98
RNFT1Q5M7Z0 AL023284.1-201ENST00000403956 276 ntBASIC2.68□□□□□ -1.98
RNFT1Q5M7Z0 AC027119.1-201ENST00000440877 241 ntBASIC2.68□□□□□ -1.98
RNFT1Q5M7Z0 RNA5SP356-201ENST00000515972 94 ntBASIC2.68□□□□□ -1.98
RNFT1Q5M7Z0 AC006023.1-201ENST00000603944 259 ntBASIC2.68□□□□□ -1.98
RNFT1Q5M7Z0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.68□□□□□ -1.98
RNFT1Q5M7Z0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.68□□□□□ -1.98
RNFT1Q5M7Z0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNFT1Q5M7Z0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.67□□□□□ -1.98
RNFT1Q5M7Z0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RNFT1Q5M7Z0 U8.9-201ENST00000365667 134 ntBASIC2.67□□□□□ -1.98
RNFT1Q5M7Z0 RNU6-1254P-201ENST00000391266 104 ntBASIC2.67□□□□□ -1.98
RNFT1Q5M7Z0 RNA5SP217-201ENST00000515959 91 ntBASIC2.67□□□□□ -1.98
RNFT1Q5M7Z0 AC026271.5-201ENST00000577873 130 ntBASIC2.67□□□□□ -1.98
RNFT1Q5M7Z0 MIR5094-201ENST00000578766 85 ntBASIC2.67□□□□□ -1.98
RNFT1Q5M7Z0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.67□□□□□ -1.98
RNFT1Q5M7Z0 RNU6-614P-201ENST00000384369 107 ntBASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 MIR29C-201ENST00000385231 88 ntBASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 RNU6-243P-201ENST00000391140 107 ntBASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 RNU6-466P-201ENST00000391224 103 ntBASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 HMGN2P39-201ENST00000398005 273 ntBASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 MIR887-201ENST00000401258 79 ntBASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 SNORA64.4-201ENST00000516632 81 ntBASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 AC121758.2-201ENST00000553271 193 ntBASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 AC021506.2-201ENST00000612354 169 ntBASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 U6.59-201ENST00000615686 107 ntBASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RNFT1Q5M7Z0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RNFT1Q5M7Z0 SNORD56.3-201ENST00000363507 71 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 RNU6-669P-201ENST00000365575 107 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 Y_RNA.443-201ENST00000384135 111 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 RNU6-154P-201ENST00000384306 106 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 MIR518E-201ENST00000385252 88 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 AC105272.1-201ENST00000438604 198 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 AC108938.1-201ENST00000451204 136 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 AC245166.1-201ENST00000521012 253 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 MIR548AO-201ENST00000579992 96 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 MIR4764-201ENST00000580680 88 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 AC103706.3-201ENST00000636297 85 ntBASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RNFT1Q5M7Z0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 239.8 ms