Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 RNA5SP184-201ENST00000411071 108 ntBASIC3.16□□□□□ -1.9
NFX1Q12986 SRIP3-201ENST00000413200 219 ntBASIC3.16□□□□□ -1.9
NFX1Q12986 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.16□□□□□ -1.9
NFX1Q12986 AL163195.1-201ENST00000496941 348 ntBASIC3.16□□□□□ -1.9
NFX1Q12986 RNU6-1116P-201ENST00000517269 99 ntBASIC3.16□□□□□ -1.9
NFX1Q12986 MIR3675-201ENST00000583661 73 ntBASIC3.16□□□□□ -1.9
NFX1Q12986 AC104984.5-201ENST00000586878 94 ntBASIC3.16□□□□□ -1.9
NFX1Q12986 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
NFX1Q12986 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
NFX1Q12986 SNORD115-3-201ENST00000363100 82 ntBASIC3.15□□□□□ -1.91
NFX1Q12986 SNORD115-22-201ENST00000364456 82 ntBASIC3.15□□□□□ -1.91
NFX1Q12986 AC108938.1-201ENST00000451204 136 ntBASIC3.15□□□□□ -1.91
NFX1Q12986 AC005908.1-201ENST00000468701 347 ntBASIC3.15□□□□□ -1.91
NFX1Q12986 TRBV12-1-201ENST00000479785 344 ntBASIC3.15□□□□□ -1.91
NFX1Q12986 MIR3162-201ENST00000581818 82 ntBASIC3.15□□□□□ -1.91
NFX1Q12986 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.15□□□□□ -1.91
NFX1Q12986 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.15□□□□□ -1.91
NFX1Q12986 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
NFX1Q12986 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NFX1Q12986 SNORD90-201ENST00000391145 111 ntBASIC3.14□□□□□ -1.91
NFX1Q12986 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.14□□□□□ -1.91
NFX1Q12986 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
NFX1Q12986 AC024995.1-201ENST00000523014 93 ntBASIC3.14□□□□□ -1.91
NFX1Q12986 AC079600.2-201ENST00000550076 130 ntBASIC3.14□□□□□ -1.91
NFX1Q12986 AL357312.1-201ENST00000603879 298 ntBASIC3.14□□□□□ -1.91
NFX1Q12986 AC092634.7-201ENST00000621022 103 ntBASIC3.14□□□□□ -1.91
NFX1Q12986 AC027279.3-201ENST00000625055 122 ntBASIC3.14□□□□□ -1.91
NFX1Q12986 AL035425.3-201ENST00000564206 4996 ntBASIC3.14□□□□□ -1.91
NFX1Q12986 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NFX1Q12986 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.13□□□□□ -1.91
NFX1Q12986 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.13□□□□□ -1.91
NFX1Q12986 AC245060.5-201ENST00000610778 3293 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 AC062016.1-201ENST00000355719 319 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 RNU6-340P-201ENST00000364005 107 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 RNU6-1067P-201ENST00000384752 107 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 MIR515-2-201ENST00000384883 83 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 MIR515-1-201ENST00000384884 83 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 HMGN1P33-201ENST00000432945 451 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.13□□□□□ -1.91
NFX1Q12986 SNRPGP12-201ENST00000449481 213 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 snoU13.17-201ENST00000458802 104 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 RNU6-75P-201ENST00000515944 104 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 AL161431.1-201ENST00000618966 4205 ntBASIC3.13□□□□□ -1.91
NFX1Q12986 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.13□□□□□ -1.91
NFX1Q12986 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NFX1Q12986 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
NFX1Q12986 SNORD45.1-201ENST00000363181 77 ntBASIC3.12□□□□□ -1.91
NFX1Q12986 SNORA38-201ENST00000363946 132 ntBASIC3.12□□□□□ -1.91
NFX1Q12986 Y_RNA.371-201ENST00000365591 113 ntBASIC3.12□□□□□ -1.91
NFX1Q12986 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
NFX1Q12986 RNU1-109P-201ENST00000383960 147 ntBASIC3.12□□□□□ -1.91
NFX1Q12986 RNU4-88P-201ENST00000411220 86 ntBASIC3.12□□□□□ -1.91
NFX1Q12986 AP004217.1-201ENST00000480579 346 ntBASIC3.12□□□□□ -1.91
NFX1Q12986 RNA5SP385-201ENST00000515947 110 ntBASIC3.12□□□□□ -1.91
NFX1Q12986 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.12□□□□□ -1.91
NFX1Q12986 AC069114.2-201ENST00000604699 304 ntBASIC3.12□□□□□ -1.91
NFX1Q12986 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NFX1Q12986 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NFX1Q12986 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NFX1Q12986 RNU6-369P-201ENST00000362515 102 ntBASIC3.11□□□□□ -1.91
NFX1Q12986 RNU6-446P-201ENST00000362827 106 ntBASIC3.11□□□□□ -1.91
NFX1Q12986 Y_RNA.99-201ENST00000363138 105 ntBASIC3.11□□□□□ -1.91
NFX1Q12986 SNORD113.1-201ENST00000363280 73 ntBASIC3.11□□□□□ -1.91
NFX1Q12986 SNORD109B-201ENST00000458961 67 ntBASIC3.11□□□□□ -1.91
NFX1Q12986 SNORD109A-201ENST00000459128 67 ntBASIC3.11□□□□□ -1.91
NFX1Q12986 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
NFX1Q12986 RNU6-850P-201ENST00000516934 103 ntBASIC3.11□□□□□ -1.91
NFX1Q12986 SNORD92-201ENST00000585078 85 ntBASIC3.11□□□□□ -1.91
NFX1Q12986 MIR8065-201ENST00000620577 100 ntBASIC3.11□□□□□ -1.91
NFX1Q12986 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NFX1Q12986 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
NFX1Q12986 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NFX1Q12986 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
NFX1Q12986 MIRLET7C-201ENST00000362160 84 ntBASIC3.1□□□□□ -1.91
NFX1Q12986 Y_RNA.354-201ENST00000365448 111 ntBASIC3.1□□□□□ -1.91
NFX1Q12986 MIR196B-201ENST00000384852 84 ntBASIC3.1□□□□□ -1.91
NFX1Q12986 SNORA26.7-201ENST00000391288 122 ntBASIC3.1□□□□□ -1.91
NFX1Q12986 AC245047.3-201ENST00000429428 127 ntBASIC3.1□□□□□ -1.91
NFX1Q12986 AC133485.1-201ENST00000567176 124 ntBASIC3.1□□□□□ -1.91
NFX1Q12986 AC026271.5-201ENST00000577873 130 ntBASIC3.1□□□□□ -1.91
NFX1Q12986 AC090897.1-201ENST00000580909 226 ntBASIC3.1□□□□□ -1.91
NFX1Q12986 AC243994.1-201ENST00000618627 109 ntBASIC3.1□□□□□ -1.91
NFX1Q12986 AL109933.3-201ENST00000619095 188 ntBASIC3.1□□□□□ -1.91
NFX1Q12986 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NFX1Q12986 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NFX1Q12986 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.1□□□□□ -1.91
NFX1Q12986 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.09□□□□□ -1.91
NFX1Q12986 Y_RNA.42-201ENST00000362660 108 ntBASIC3.09□□□□□ -1.91
NFX1Q12986 RNU1-91P-201ENST00000364746 163 ntBASIC3.09□□□□□ -1.91
NFX1Q12986 RNU6-1187P-201ENST00000364771 110 ntBASIC3.09□□□□□ -1.91
NFX1Q12986 Y_RNA.283-201ENST00000364798 112 ntBASIC3.09□□□□□ -1.91
NFX1Q12986 RNA5SP126-201ENST00000365092 109 ntBASIC3.09□□□□□ -1.91
NFX1Q12986 RNU6-1072P-201ENST00000384703 107 ntBASIC3.09□□□□□ -1.91
NFX1Q12986 RNU6-443P-201ENST00000384780 107 ntBASIC3.09□□□□□ -1.91
NFX1Q12986 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NFX1Q12986 MIR6715A-201ENST00000615929 79 ntBASIC3.09□□□□□ -1.91
NFX1Q12986 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.09□□□□□ -1.91
NFX1Q12986 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NFX1Q12986 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
NFX1Q12986 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 277 ms