Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SNORD92-201ENST00000585078 85 ntBASIC0.28□□□□□ -2.36
HMGCS1Q01581 AC097639.2-201ENST00000603159 172 ntBASIC0.28□□□□□ -2.36
HMGCS1Q01581 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
HMGCS1Q01581 AL365265.1-201ENST00000621045 234 ntBASIC0.28□□□□□ -2.36
HMGCS1Q01581 MIR6717-201ENST00000622747 73 ntBASIC0.28□□□□□ -2.36
HMGCS1Q01581 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
HMGCS1Q01581 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
HMGCS1Q01581 RNA5SP517-201ENST00000364724 117 ntBASIC0.27□□□□□ -2.37
HMGCS1Q01581 Y_RNA.351-201ENST00000365436 96 ntBASIC0.27□□□□□ -2.37
HMGCS1Q01581 RNU6-597P-201ENST00000365620 102 ntBASIC0.27□□□□□ -2.37
HMGCS1Q01581 MIR616-201ENST00000385293 97 ntBASIC0.27□□□□□ -2.37
HMGCS1Q01581 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGCS1Q01581 MTATP8P1-201ENST00000467115 207 ntBASIC0.27□□□□□ -2.37
HMGCS1Q01581 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGCS1Q01581 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.27□□□□□ -2.37
HMGCS1Q01581 AL442663.2-201ENST00000554385 511 ntBASIC0.27□□□□□ -2.37
HMGCS1Q01581 U2.14-201ENST00000615943 113 ntBASIC0.27□□□□□ -2.37
HMGCS1Q01581 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 MIR302B-201ENST00000362188 73 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.82-201ENST00000363000 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.92-201ENST00000363043 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.235-201ENST00000364412 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.306-201ENST00000365015 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.312-201ENST00000365089 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.322-201ENST00000365151 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 RNU4-45P-201ENST00000365469 141 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.393-201ENST00000383936 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.416-201ENST00000384014 113 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 MT-TW-201ENST00000387382 68 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.590-201ENST00000410140 107 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.650-201ENST00000459002 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.777-201ENST00000516982 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.771-201ENST00000598668 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 Y_RNA.789-201ENST00000622480 102 ntBASIC0.26□□□□□ -2.37
HMGCS1Q01581 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
HMGCS1Q01581 RNU6-238P-201ENST00000363313 106 ntBASIC0.25□□□□□ -2.37
HMGCS1Q01581 Y_RNA.483-201ENST00000384380 101 ntBASIC0.25□□□□□ -2.37
HMGCS1Q01581 RNY1P4-201ENST00000384595 115 ntBASIC0.25□□□□□ -2.37
HMGCS1Q01581 MT-TF-201ENST00000387314 71 ntBASIC0.25□□□□□ -2.37
HMGCS1Q01581 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
HMGCS1Q01581 RNU6-635P-201ENST00000516651 102 ntBASIC0.25□□□□□ -2.37
HMGCS1Q01581 RNA5SP94-201ENST00000516917 108 ntBASIC0.25□□□□□ -2.37
HMGCS1Q01581 RN7SL793P-201ENST00000583259 296 ntBASIC0.25□□□□□ -2.37
HMGCS1Q01581 MIR7111-201ENST00000619751 72 ntBASIC0.25□□□□□ -2.37
HMGCS1Q01581 RNU6-713P-201ENST00000384761 107 ntBASIC0.24□□□□□ -2.37
HMGCS1Q01581 RNU6-381P-201ENST00000391259 108 ntBASIC0.24□□□□□ -2.37
HMGCS1Q01581 SNORD93-201ENST00000408813 74 ntBASIC0.24□□□□□ -2.37
HMGCS1Q01581 Y_RNA.679-201ENST00000516416 91 ntBASIC0.24□□□□□ -2.37
HMGCS1Q01581 RNU6-448P-201ENST00000517052 107 ntBASIC0.24□□□□□ -2.37
HMGCS1Q01581 MIR4643-201ENST00000577473 78 ntBASIC0.24□□□□□ -2.37
HMGCS1Q01581 MIR3678-201ENST00000578455 94 ntBASIC0.24□□□□□ -2.37
HMGCS1Q01581 MIR4282-201ENST00000583613 67 ntBASIC0.24□□□□□ -2.37
HMGCS1Q01581 AC044792.1-201ENST00000593294 196 ntBASIC0.24□□□□□ -2.37
HMGCS1Q01581 AC010487.4-201ENST00000637027 61 ntBASIC0.24□□□□□ -2.37
HMGCS1Q01581 RNU6-653P-201ENST00000363074 106 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 RNA5SP117-201ENST00000365294 118 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 RNU6-1227P-201ENST00000383981 107 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 MIR518A1-201ENST00000385068 85 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 Y_RNA.617-201ENST00000410920 90 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGCS1Q01581 MIR5197-201ENST00000583721 112 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 SNORA25.18-201ENST00000607153 114 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 MIR8066-201ENST00000617280 78 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 AC091932.4-201ENST00000623386 200 ntBASIC0.23□□□□□ -2.37
HMGCS1Q01581 AL596211.1-201ENST00000569873 2277 ntBASIC0.22□□□□□ -2.37
HMGCS1Q01581 MIR335-201ENST00000362173 94 ntBASIC0.22□□□□□ -2.37
HMGCS1Q01581 Y_RNA.36-201ENST00000362602 112 ntBASIC0.22□□□□□ -2.37
HMGCS1Q01581 RNU4-83P-201ENST00000410863 133 ntBASIC0.22□□□□□ -2.37
HMGCS1Q01581 Y_RNA.618-201ENST00000410949 107 ntBASIC0.22□□□□□ -2.37
HMGCS1Q01581 SNORA40.8-201ENST00000411034 126 ntBASIC0.22□□□□□ -2.37
HMGCS1Q01581 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.22□□□□□ -2.37
HMGCS1Q01581 AL662814.1-201ENST00000617364 121 ntBASIC0.22□□□□□ -2.37
HMGCS1Q01581 MIR8062-201ENST00000621515 85 ntBASIC0.22□□□□□ -2.37
HMGCS1Q01581 Y_RNA.176-201ENST00000363815 109 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 Y_RNA.461-201ENST00000384263 103 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 Y_RNA.542-201ENST00000384641 111 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
HMGCS1Q01581 MIR1302-6-201ENST00000408466 90 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 RNA5SP237-201ENST00000410414 113 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 SEPT7P4-201ENST00000437076 306 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 RNU7-80P-201ENST00000459562 61 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 AC133485.4-201ENST00000561835 220 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 AL442067.1-201ENST00000613261 223 ntBASIC0.21□□□□□ -2.38
HMGCS1Q01581 Y_RNA.42-201ENST00000362660 108 ntBASIC0.2□□□□□ -2.38
HMGCS1Q01581 Y_RNA.76-201ENST00000362931 109 ntBASIC0.2□□□□□ -2.38
HMGCS1Q01581 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
HMGCS1Q01581 RNU6-728P-201ENST00000365375 104 ntBASIC0.2□□□□□ -2.38
HMGCS1Q01581 RNU6-472P-201ENST00000384299 107 ntBASIC0.2□□□□□ -2.38
HMGCS1Q01581 SNORA8.2-201ENST00000384372 139 ntBASIC0.2□□□□□ -2.38
HMGCS1Q01581 Y_RNA.567-201ENST00000384736 106 ntBASIC0.2□□□□□ -2.38
HMGCS1Q01581 MIR193B-201ENST00000384907 83 ntBASIC0.2□□□□□ -2.38
HMGCS1Q01581 MIR644A-201ENST00000385262 94 ntBASIC0.2□□□□□ -2.38
HMGCS1Q01581 U8.15-201ENST00000390947 134 ntBASIC0.2□□□□□ -2.38
HMGCS1Q01581 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.2□□□□□ -2.38
HMGCS1Q01581 AC011921.3-201ENST00000605540 361 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 223.1 ms