Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AL512598.1-201ENST00000610158 273 ntBASIC1.94□□□□□ -2.1
HERVK_113P62684 MIR8074-201ENST00000615081 81 ntBASIC1.94□□□□□ -2.1
HERVK_113P62684 MIR8070-201ENST00000616510 88 ntBASIC1.94□□□□□ -2.1
HERVK_113P62684 Y_RNA.213-201ENST00000364178 111 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 SNORA22-201ENST00000383907 134 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 Y_RNA.537-201ENST00000384626 109 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 RNU2-40P-201ENST00000410833 196 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 AL161935.2-201ENST00000414627 60 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.93□□□□□ -2.1
HERVK_113P62684 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.93□□□□□ -2.1
HERVK_113P62684 RNU2-13P-201ENST00000515909 113 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 RNU2-35P-201ENST00000516446 142 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 RNU7-43P-201ENST00000516554 64 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 RNU6-922P-201ENST00000516753 99 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 AC024614.2-201ENST00000577584 372 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.93□□□□□ -2.1
HERVK_113P62684 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HERVK_113P62684 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HERVK_113P62684 SNORA63.4-201ENST00000362763 126 ntBASIC1.92□□□□□ -2.1
HERVK_113P62684 Y_RNA.198-201ENST00000364013 98 ntBASIC1.92□□□□□ -2.1
HERVK_113P62684 RNU6-880P-201ENST00000384526 107 ntBASIC1.92□□□□□ -2.1
HERVK_113P62684 RNY4P18-201ENST00000391107 89 ntBASIC1.92□□□□□ -2.1
HERVK_113P62684 AL022718.1-201ENST00000412004 84 ntBASIC1.92□□□□□ -2.1
HERVK_113P62684 AC022523.2-201ENST00000561045 150 ntBASIC1.92□□□□□ -2.1
HERVK_113P62684 MIR3152-201ENST00000579801 74 ntBASIC1.92□□□□□ -2.1
HERVK_113P62684 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
HERVK_113P62684 AC008133.2-201ENST00000624540 351 ntBASIC1.92□□□□□ -2.1
HERVK_113P62684 Y_RNA.118-201ENST00000363300 101 ntBASIC1.91□□□□□ -2.1
HERVK_113P62684 SNORA24-201ENST00000384096 131 ntBASIC1.91□□□□□ -2.1
HERVK_113P62684 MIR653-201ENST00000385279 96 ntBASIC1.91□□□□□ -2.1
HERVK_113P62684 RNU6-913P-201ENST00000390913 95 ntBASIC1.91□□□□□ -2.1
HERVK_113P62684 RNU6-1190P-201ENST00000410811 104 ntBASIC1.91□□□□□ -2.1
HERVK_113P62684 RNA5SP144-201ENST00000410846 116 ntBASIC1.91□□□□□ -2.1
HERVK_113P62684 RNU6-589P-201ENST00000516485 107 ntBASIC1.91□□□□□ -2.1
HERVK_113P62684 AC007012.1-201ENST00000567192 175 ntBASIC1.91□□□□□ -2.1
HERVK_113P62684 SNORA77B-201ENST00000578179 125 ntBASIC1.91□□□□□ -2.1
HERVK_113P62684 AL645939.4-201ENST00000604495 135 ntBASIC1.91□□□□□ -2.1
HERVK_113P62684 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.91□□□□□ -2.1
HERVK_113P62684 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HERVK_113P62684 RNU6-1104P-201ENST00000384723 104 ntBASIC1.9□□□□□ -2.11
HERVK_113P62684 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
HERVK_113P62684 Y_RNA.508-201ENST00000384502 114 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 RNU6-1319P-201ENST00000390855 104 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 RNU6-747P-201ENST00000390928 104 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 RNU6-241P-201ENST00000391148 104 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 RNA5SP261-201ENST00000410536 106 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 RNU6-177P-201ENST00000411257 104 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 AL512326.2-201ENST00000426359 151 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 HMGN1P33-201ENST00000432945 451 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 RNU7-73P-201ENST00000458743 63 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 SNORD53B-201ENST00000577887 78 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 AL020996.3-201ENST00000606617 222 ntBASIC1.89□□□□□ -2.11
HERVK_113P62684 SNORA22.1-201ENST00000362701 134 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 RNA5SP363-201ENST00000365072 115 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 MIR499A-201ENST00000384903 122 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 MT-TI-201ENST00000387365 69 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 POLR2J4-204ENST00000418424 324 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 snoU13.16-201ENST00000459350 104 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 SNORD111.1-201ENST00000516421 86 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 AC015688.6-201ENST00000577737 104 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 MIR3618-201ENST00000580330 88 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 BX248123.2-201ENST00000606318 124 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 MIR6717-201ENST00000622747 73 ntBASIC1.88□□□□□ -2.11
HERVK_113P62684 RNY4P6-201ENST00000363667 96 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 Y_RNA.171-201ENST00000363760 102 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 RNU1-42P-201ENST00000364033 160 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 RNU6-60P-201ENST00000364792 103 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 Y_RNA.549-201ENST00000384657 102 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 AC063976.4-201ENST00000421971 163 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 snoU13.9-201ENST00000458927 103 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 RNU7-113P-201ENST00000459273 62 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 AC005908.1-201ENST00000468701 347 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 PDCD5P2-201ENST00000507570 312 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 RNU7-41P-201ENST00000515917 61 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 AC004812.1-201ENST00000540773 146 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 MIR4251-201ENST00000635819 61 ntBASIC1.87□□□□□ -2.11
HERVK_113P62684 SNORA63.5-201ENST00000363548 123 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 SNORA1.1-201ENST00000364671 133 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 Y_RNA.531-201ENST00000384589 121 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 SNORD41-201ENST00000386967 70 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 SNORA26.6-201ENST00000391256 115 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 HSPE1P24-201ENST00000450782 238 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 RNU6-893P-201ENST00000458841 100 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 RNU6-947P-201ENST00000516264 106 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 RNU7-6P-201ENST00000516845 62 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 MIR3163-201ENST00000581592 73 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 AL513534.2-201ENST00000603836 250 ntBASIC1.86□□□□□ -2.11
HERVK_113P62684 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.86□□□□□ -2.11
HERVK_113P62684 SNORD12C-201ENST00000386307 89 ntBASIC1.85□□□□□ -2.11
HERVK_113P62684 RNU6-412P-201ENST00000516434 106 ntBASIC1.85□□□□□ -2.11
HERVK_113P62684 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
HERVK_113P62684 AC019176.1-201ENST00000518519 225 ntBASIC1.85□□□□□ -2.11
HERVK_113P62684 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HERVK_113P62684 RNU6-153P-201ENST00000364422 104 ntBASIC1.84□□□□□ -2.11
HERVK_113P62684 SNORA25.9-201ENST00000365087 128 ntBASIC1.84□□□□□ -2.11
HERVK_113P62684 Y_RNA.466-201ENST00000384294 113 ntBASIC1.84□□□□□ -2.11
HERVK_113P62684 MIR30A-201ENST00000385092 71 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms