Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
PAX9P55771 MIR377-201ENST00000362145 69 ntBASIC0.87□□□□□ -2.27
PAX9P55771 Y_RNA.168-201ENST00000363740 102 ntBASIC0.87□□□□□ -2.27
PAX9P55771 SNORD113.3-201ENST00000364630 78 ntBASIC0.87□□□□□ -2.27
PAX9P55771 RNU6-580P-201ENST00000365159 107 ntBASIC0.87□□□□□ -2.27
PAX9P55771 RNU4-11P-201ENST00000365287 132 ntBASIC0.87□□□□□ -2.27
PAX9P55771 Y_RNA.398-201ENST00000383952 99 ntBASIC0.87□□□□□ -2.27
PAX9P55771 SNORD116-18-201ENST00000383961 92 ntBASIC0.87□□□□□ -2.27
PAX9P55771 SNORA2B-201ENST00000384583 137 ntBASIC0.87□□□□□ -2.27
PAX9P55771 SNORD37.2-201ENST00000391075 66 ntBASIC0.87□□□□□ -2.27
PAX9P55771 snoU13.21-201ENST00000459368 105 ntBASIC0.87□□□□□ -2.27
PAX9P55771 MIR4264-201ENST00000583520 66 ntBASIC0.87□□□□□ -2.27
PAX9P55771 AC103810.9-201ENST00000606688 112 ntBASIC0.87□□□□□ -2.27
PAX9P55771 uc_338.6-201ENST00000613544 171 ntBASIC0.87□□□□□ -2.27
PAX9P55771 Y_RNA.778-201ENST00000620203 90 ntBASIC0.87□□□□□ -2.27
PAX9P55771 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
PAX9P55771 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
PAX9P55771 Y_RNA.8-201ENST00000362353 102 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU6-508P-201ENST00000363231 103 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU6-151P-201ENST00000364158 107 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU4-16P-201ENST00000364737 141 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU6-449P-201ENST00000383914 107 ntBASIC0.86□□□□□ -2.27
PAX9P55771 SNORD38B-201ENST00000384690 67 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU6-1319P-201ENST00000390855 104 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU6-747P-201ENST00000390928 104 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU6-241P-201ENST00000391148 104 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU6-177P-201ENST00000411257 104 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU7-197P-201ENST00000458836 62 ntBASIC0.86□□□□□ -2.27
PAX9P55771 UBL5P1-201ENST00000507979 193 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU7-70P-201ENST00000516941 66 ntBASIC0.86□□□□□ -2.27
PAX9P55771 MTND5P41-201ENST00000517498 206 ntBASIC0.86□□□□□ -2.27
PAX9P55771 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.86□□□□□ -2.27
PAX9P55771 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.86□□□□□ -2.27
PAX9P55771 MIR6740-201ENST00000618268 113 ntBASIC0.86□□□□□ -2.27
PAX9P55771 AC021613.1-201ENST00000623880 111 ntBASIC0.86□□□□□ -2.27
PAX9P55771 SNORD38B-202ENST00000625943 69 ntBASIC0.86□□□□□ -2.27
PAX9P55771 AC021753.1-201ENST00000635724 168 ntBASIC0.86□□□□□ -2.27
PAX9P55771 RNU6-349P-201ENST00000362402 107 ntBASIC0.85□□□□□ -2.27
PAX9P55771 Y_RNA.180-201ENST00000363867 113 ntBASIC0.85□□□□□ -2.27
PAX9P55771 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
PAX9P55771 SNORD12C-201ENST00000386307 89 ntBASIC0.85□□□□□ -2.27
PAX9P55771 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
PAX9P55771 RPS3AP1-201ENST00000413190 320 ntBASIC0.85□□□□□ -2.27
PAX9P55771 RNU6-237P-201ENST00000515985 71 ntBASIC0.85□□□□□ -2.27
PAX9P55771 Y_RNA.686-201ENST00000516548 134 ntBASIC0.85□□□□□ -2.27
PAX9P55771 AC112693.2-201ENST00000556538 232 ntBASIC0.85□□□□□ -2.27
PAX9P55771 AP000753.3-201ENST00000604083 169 ntBASIC0.85□□□□□ -2.27
PAX9P55771 SNORD114-21-201ENST00000606412 72 ntBASIC0.85□□□□□ -2.27
PAX9P55771 MIR6841-201ENST00000637129 72 ntBASIC0.85□□□□□ -2.27
PAX9P55771 Y_RNA.430-201ENST00000384081 110 ntBASIC0.84□□□□□ -2.27
PAX9P55771 MT-TR-201ENST00000387439 65 ntBASIC0.84□□□□□ -2.27
PAX9P55771 SNORD111-201ENST00000408139 94 ntBASIC0.84□□□□□ -2.27
PAX9P55771 AC108729.3-201ENST00000513484 108 ntBASIC0.84□□□□□ -2.27
PAX9P55771 snoU13.31-201ENST00000607291 104 ntBASIC0.84□□□□□ -2.27
PAX9P55771 AC091895.1-201ENST00000624494 256 ntBASIC0.84□□□□□ -2.27
PAX9P55771 RNU6-369P-201ENST00000362515 102 ntBASIC0.83□□□□□ -2.28
PAX9P55771 RNY1P6-201ENST00000384193 109 ntBASIC0.83□□□□□ -2.28
PAX9P55771 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
PAX9P55771 Y_RNA.584-201ENST00000391090 114 ntBASIC0.83□□□□□ -2.28
PAX9P55771 MIR548I1-201ENST00000408810 149 ntBASIC0.83□□□□□ -2.28
PAX9P55771 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
PAX9P55771 RNU7-62P-201ENST00000458856 62 ntBASIC0.83□□□□□ -2.28
PAX9P55771 snoU13.2-201ENST00000459201 104 ntBASIC0.83□□□□□ -2.28
PAX9P55771 Y_RNA.651-201ENST00000459380 103 ntBASIC0.83□□□□□ -2.28
PAX9P55771 RNU6-1258P-201ENST00000516911 111 ntBASIC0.83□□□□□ -2.28
PAX9P55771 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.83□□□□□ -2.28
PAX9P55771 SNORA22.1-201ENST00000362701 134 ntBASIC0.82□□□□□ -2.28
PAX9P55771 SNORD114-24-201ENST00000365029 72 ntBASIC0.82□□□□□ -2.28
PAX9P55771 Y_RNA.327-201ENST00000365201 102 ntBASIC0.82□□□□□ -2.28
PAX9P55771 Y_RNA.338-201ENST00000365320 114 ntBASIC0.82□□□□□ -2.28
PAX9P55771 MIR588-201ENST00000384900 83 ntBASIC0.82□□□□□ -2.28
PAX9P55771 RNU6-460P-201ENST00000391158 108 ntBASIC0.82□□□□□ -2.28
PAX9P55771 MIR942-201ENST00000401111 86 ntBASIC0.82□□□□□ -2.28
PAX9P55771 RNA5SP261-201ENST00000410536 106 ntBASIC0.82□□□□□ -2.28
PAX9P55771 AC015818.7-201ENST00000428754 109 ntBASIC0.82□□□□□ -2.28
PAX9P55771 AC087499.7-201ENST00000441958 109 ntBASIC0.82□□□□□ -2.28
PAX9P55771 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
PAX9P55771 RNU6-255P-201ENST00000516957 105 ntBASIC0.82□□□□□ -2.28
PAX9P55771 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.82□□□□□ -2.28
PAX9P55771 MIR4295-201ENST00000585286 85 ntBASIC0.82□□□□□ -2.28
PAX9P55771 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PAX9P55771 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
PAX9P55771 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.81□□□□□ -2.28
PAX9P55771 Y_RNA.120-201ENST00000363304 110 ntBASIC0.81□□□□□ -2.28
PAX9P55771 Y_RNA.170-201ENST00000363746 110 ntBASIC0.81□□□□□ -2.28
PAX9P55771 RNU6-309P-201ENST00000364573 106 ntBASIC0.81□□□□□ -2.28
PAX9P55771 Y_RNA.464-201ENST00000384282 110 ntBASIC0.81□□□□□ -2.28
PAX9P55771 MIR563-201ENST00000385080 79 ntBASIC0.81□□□□□ -2.28
PAX9P55771 SNORD83.1-201ENST00000411362 77 ntBASIC0.81□□□□□ -2.28
PAX9P55771 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
PAX9P55771 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.81□□□□□ -2.28
PAX9P55771 RNU6-1212P-201ENST00000517023 104 ntBASIC0.81□□□□□ -2.28
PAX9P55771 Y_RNA.757-201ENST00000578934 114 ntBASIC0.81□□□□□ -2.28
PAX9P55771 MIR3152-201ENST00000579801 74 ntBASIC0.81□□□□□ -2.28
PAX9P55771 AC010332.2-201ENST00000613083 1904 ntBASIC0.8□□□□□ -2.28
PAX9P55771 RNA5SP432-201ENST00000362480 116 ntBASIC0.8□□□□□ -2.28
PAX9P55771 RNU6-1335P-201ENST00000365426 107 ntBASIC0.8□□□□□ -2.28
PAX9P55771 Y_RNA.400-201ENST00000383963 111 ntBASIC0.8□□□□□ -2.28
PAX9P55771 SNORA20-201ENST00000384662 132 ntBASIC0.8□□□□□ -2.28
PAX9P55771 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms