Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 SNORA1.1-201ENST00000364671 133 ntBASIC2□□□□□ -2.09
SLC6A11P48066 Y_RNA.299-201ENST00000364973 94 ntBASIC2□□□□□ -2.09
SLC6A11P48066 MIR194-1-201ENST00000384892 85 ntBASIC2□□□□□ -2.09
SLC6A11P48066 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
SLC6A11P48066 AL451046.2-201ENST00000403074 277 ntBASIC2□□□□□ -2.09
SLC6A11P48066 RNU4-69P-201ENST00000410677 143 ntBASIC2□□□□□ -2.09
SLC6A11P48066 AC003989.2-201ENST00000440224 169 ntBASIC2□□□□□ -2.09
SLC6A11P48066 snoU13.16-201ENST00000459350 104 ntBASIC2□□□□□ -2.09
SLC6A11P48066 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2□□□□□ -2.09
SLC6A11P48066 MIR548AE2-201ENST00000583456 67 ntBASIC2□□□□□ -2.09
SLC6A11P48066 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
SLC6A11P48066 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 SNORA32-201ENST00000384072 121 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 Y_RNA.507-201ENST00000384500 99 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 SNORD77B-201ENST00000391112 67 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 RNY4P30-201ENST00000410216 95 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 MIR1912-201ENST00000410389 80 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 SNORA19.1-201ENST00000410656 129 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 RPS3AP1-201ENST00000413190 320 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 JTBP1-201ENST00000441314 247 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 RNA5SP182-201ENST00000516064 82 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 AP000942.3-201ENST00000603702 160 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 MIR1255B1-201ENST00000636325 63 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
SLC6A11P48066 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SLC6A11P48066 RNU6-661P-201ENST00000362409 107 ntBASIC1.98□□□□□ -2.09
SLC6A11P48066 Y_RNA.155-201ENST00000363632 101 ntBASIC1.98□□□□□ -2.09
SLC6A11P48066 AC244636.1-201ENST00000421152 228 ntBASIC1.98□□□□□ -2.09
SLC6A11P48066 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
SLC6A11P48066 RNU6-922P-201ENST00000516753 99 ntBASIC1.98□□□□□ -2.09
SLC6A11P48066 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC6A11P48066 MIR3618-201ENST00000580330 88 ntBASIC1.98□□□□□ -2.09
SLC6A11P48066 Y_RNA.773-201ENST00000607168 90 ntBASIC1.98□□□□□ -2.09
SLC6A11P48066 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SLC6A11P48066 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SLC6A11P48066 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SLC6A11P48066 Y_RNA.430-201ENST00000384081 110 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 MIR590-201ENST00000385008 97 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 RPS27P21-201ENST00000486977 252 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 AC090255.1-201ENST00000495779 349 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 RNU6-109P-201ENST00000516364 107 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 SNORD111.1-201ENST00000516421 86 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 RNU6-184P-201ENST00000516514 107 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 Y_RNA.694-201ENST00000516677 117 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.97□□□□□ -2.09
SLC6A11P48066 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 MIR4251-201ENST00000635819 61 ntBASIC1.97□□□□□ -2.09
SLC6A11P48066 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SLC6A11P48066 RNA5SP37-201ENST00000365420 130 ntBASIC1.96□□□□□ -2.1
SLC6A11P48066 AL161935.2-201ENST00000414627 60 ntBASIC1.96□□□□□ -2.1
SLC6A11P48066 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
SLC6A11P48066 MIR4299-201ENST00000577899 72 ntBASIC1.96□□□□□ -2.1
SLC6A11P48066 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SLC6A11P48066 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.95□□□□□ -2.1
SLC6A11P48066 SNORD115-2-201ENST00000362842 82 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 SNORD115-19-201ENST00000363098 82 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 SNORD115-18-201ENST00000363293 82 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 SNORD115-17-201ENST00000364612 82 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 SNORD115-20-201ENST00000365099 82 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 RNU6-616P-201ENST00000384353 107 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 Y_RNA.544-201ENST00000384650 113 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 MIR653-201ENST00000385279 96 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SLC6A11P48066 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 AC245047.7-201ENST00000440265 293 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 RNU7-41P-201ENST00000515917 61 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 RNU6-1053P-201ENST00000515930 101 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 CYP3A52P-201ENST00000563326 91 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 AC006254.2-201ENST00000603259 279 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 AP001318.4-201ENST00000616637 121 ntBASIC1.95□□□□□ -2.1
SLC6A11P48066 RNU4-67P-201ENST00000364569 141 ntBASIC1.94□□□□□ -2.1
SLC6A11P48066 Y_RNA.348-201ENST00000365403 103 ntBASIC1.94□□□□□ -2.1
SLC6A11P48066 RNU6-409P-201ENST00000384114 104 ntBASIC1.94□□□□□ -2.1
SLC6A11P48066 RNU6-905P-201ENST00000384434 107 ntBASIC1.94□□□□□ -2.1
SLC6A11P48066 SNORA7.5-201ENST00000410672 110 ntBASIC1.94□□□□□ -2.1
SLC6A11P48066 SNORA40.13-201ENST00000516379 120 ntBASIC1.94□□□□□ -2.1
SLC6A11P48066 MIR5582-201ENST00000579697 68 ntBASIC1.94□□□□□ -2.1
SLC6A11P48066 MIR548AO-201ENST00000579992 96 ntBASIC1.94□□□□□ -2.1
SLC6A11P48066 FAM71BP1-201ENST00000604431 523 ntBASIC1.94□□□□□ -2.1
SLC6A11P48066 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.94□□□□□ -2.1
SLC6A11P48066 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SLC6A11P48066 Y_RNA.226-201ENST00000364337 114 ntBASIC1.93□□□□□ -2.1
SLC6A11P48066 RNA5SP138-201ENST00000365098 114 ntBASIC1.93□□□□□ -2.1
SLC6A11P48066 RNU6-733P-201ENST00000410759 104 ntBASIC1.93□□□□□ -2.1
SLC6A11P48066 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
SLC6A11P48066 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
SLC6A11P48066 MIR4498-201ENST00000577599 66 ntBASIC1.93□□□□□ -2.1
SLC6A11P48066 MIR8055-201ENST00000610739 97 ntBASIC1.93□□□□□ -2.1
SLC6A11P48066 AL627230.6-201ENST00000611129 280 ntBASIC1.93□□□□□ -2.1
SLC6A11P48066 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
SLC6A11P48066 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
SLC6A11P48066 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SLC6A11P48066 RNU6-363P-201ENST00000362895 105 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 RNU6-640P-201ENST00000363693 105 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 RNU4-36P-201ENST00000364294 144 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 RNU6-342P-201ENST00000384521 104 ntBASIC1.92□□□□□ -2.1
SLC6A11P48066 MIR9-3-201ENST00000385084 90 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms