Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNU6-535P-201ENST00000384722 107 ntBASIC-0.15□□□□□ -2.43
SSR1P43307 MIR526A2-201ENST00000390198 65 ntBASIC-0.15□□□□□ -2.43
SSR1P43307 SNRPGP8-201ENST00000454064 226 ntBASIC-0.15□□□□□ -2.43
SSR1P43307 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
SSR1P43307 RNU6-653P-201ENST00000363074 106 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 RNA5SP245-201ENST00000364239 121 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 RNU6-716P-201ENST00000365621 103 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 RNU6-211P-201ENST00000384047 107 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 RNU6-514P-201ENST00000384208 107 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 SNORD28-201ENST00000384706 75 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 MIR145-201ENST00000384967 88 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 ELOCP20-201ENST00000422460 345 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 AL358176.2-201ENST00000425769 204 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.16□□□□□ -2.44
SSR1P43307 RNU6-475P-201ENST00000516073 104 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 AP003733.2-201ENST00000529409 171 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.16□□□□□ -2.44
SSR1P43307 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.16□□□□□ -2.44
SSR1P43307 AC244669.1-204ENST00000621564 178 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 AC091932.4-201ENST00000623386 200 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 MIR6828-201ENST00000636181 60 ntBASIC-0.16□□□□□ -2.44
SSR1P43307 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.17□□□□□ -2.44
SSR1P43307 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.17□□□□□ -2.44
SSR1P43307 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.17□□□□□ -2.44
SSR1P43307 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.17□□□□□ -2.44
SSR1P43307 SNORA27.4-201ENST00000516650 95 ntBASIC-0.17□□□□□ -2.44
SSR1P43307 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.17□□□□□ -2.44
SSR1P43307 RNU4-73P-201ENST00000363164 141 ntBASIC-0.18□□□□□ -2.44
SSR1P43307 SNORA63.5-201ENST00000363548 123 ntBASIC-0.18□□□□□ -2.44
SSR1P43307 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.18□□□□□ -2.44
SSR1P43307 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.18□□□□□ -2.44
SSR1P43307 MIR548H2-201ENST00000408874 88 ntBASIC-0.18□□□□□ -2.44
SSR1P43307 RNY3P15-201ENST00000516297 97 ntBASIC-0.18□□□□□ -2.44
SSR1P43307 RNU1-29P-201ENST00000606574 126 ntBASIC-0.18□□□□□ -2.44
SSR1P43307 MIR330-201ENST00000362196 94 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 RNU4-16P-201ENST00000364737 141 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 RNU6-929P-201ENST00000384429 107 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 SNORA8.3-201ENST00000384679 139 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 MIR626-201ENST00000385032 94 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 RNA5SP63-201ENST00000391225 112 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 RNU6-651P-201ENST00000411040 105 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 AC108059.2-201ENST00000434626 151 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 AL731563.1-201ENST00000442202 214 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 RPL39P34-201ENST00000477141 156 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 RNU6-561P-201ENST00000516222 102 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 MIR5190-201ENST00000581537 80 ntBASIC-0.19□□□□□ -2.44
SSR1P43307 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
SSR1P43307 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.2□□□□□ -2.44
SSR1P43307 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.2□□□□□ -2.44
SSR1P43307 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.2□□□□□ -2.44
SSR1P43307 SNORA18-201ENST00000384416 132 ntBASIC-0.2□□□□□ -2.44
SSR1P43307 MIR610-201ENST00000385139 96 ntBASIC-0.2□□□□□ -2.44
SSR1P43307 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.2□□□□□ -2.44
SSR1P43307 SNORA53-201ENST00000391141 249 ntBASIC-0.2□□□□□ -2.44
SSR1P43307 MIR1273G-201ENST00000577677 100 ntBASIC-0.2□□□□□ -2.44
SSR1P43307 AL442067.1-201ENST00000613261 223 ntBASIC-0.2□□□□□ -2.44
SSR1P43307 AC091304.10-201ENST00000641554 121 ntBASIC-0.2□□□□□ -2.44
SSR1P43307 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.21□□□□□ -2.44
SSR1P43307 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.21□□□□□ -2.44
SSR1P43307 RNA5SP128-201ENST00000365305 116 ntBASIC-0.21□□□□□ -2.44
SSR1P43307 RNU6-326P-201ENST00000365480 107 ntBASIC-0.21□□□□□ -2.44
SSR1P43307 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.21□□□□□ -2.44
SSR1P43307 MIR1252-201ENST00000408861 65 ntBASIC-0.21□□□□□ -2.44
SSR1P43307 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.21□□□□□ -2.44
SSR1P43307 SNORA40.15-201ENST00000516884 107 ntBASIC-0.21□□□□□ -2.44
SSR1P43307 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.21□□□□□ -2.44
SSR1P43307 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.22□□□□□ -2.44
SSR1P43307 RNY1P13-201ENST00000365030 105 ntBASIC-0.22□□□□□ -2.44
SSR1P43307 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.22□□□□□ -2.44
SSR1P43307 AL606845.1-201ENST00000404881 255 ntBASIC-0.22□□□□□ -2.44
SSR1P43307 RNU6-101P-201ENST00000410323 104 ntBASIC-0.22□□□□□ -2.44
SSR1P43307 AC141557.1-201ENST00000540982 400 ntBASIC-0.22□□□□□ -2.44
SSR1P43307 AC037487.3-201ENST00000606668 112 ntBASIC-0.22□□□□□ -2.44
SSR1P43307 MIR8087-201ENST00000612745 78 ntBASIC-0.22□□□□□ -2.44
SSR1P43307 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.22□□□□□ -2.44
SSR1P43307 AC090971.5-201ENST00000621102 293 ntBASIC-0.22□□□□□ -2.44
SSR1P43307 MTND5P32-201ENST00000560711 1802 ntBASIC-0.22□□□□□ -2.45
SSR1P43307 SNORA22.1-201ENST00000362701 134 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 SNORA63.7-201ENST00000365579 123 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 RNU6-756P-201ENST00000383997 107 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 RNU6-949P-201ENST00000384040 107 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 MIR489-201ENST00000384923 84 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 MIR1197-201ENST00000408818 88 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 MTND3P22-201ENST00000510932 243 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 RNU6-531P-201ENST00000516694 104 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 MIR5197-201ENST00000583721 112 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 MIR4639-201ENST00000584938 69 ntBASIC-0.23□□□□□ -2.45
SSR1P43307 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 498 ms