Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RNU6-453P-201ENST00000516819 85 ntBASIC0.32□□□□□ -2.36
CTNNA1P35221 AC008608.1-201ENST00000603910 127 ntBASIC0.32□□□□□ -2.36
CTNNA1P35221 MIR8062-201ENST00000621515 85 ntBASIC0.32□□□□□ -2.36
CTNNA1P35221 Y_RNA.7-201ENST00000362352 102 ntBASIC0.31□□□□□ -2.36
CTNNA1P35221 Y_RNA.122-201ENST00000363331 96 ntBASIC0.31□□□□□ -2.36
CTNNA1P35221 Y_RNA.454-201ENST00000384224 113 ntBASIC0.31□□□□□ -2.36
CTNNA1P35221 SNORD12C-201ENST00000386307 89 ntBASIC0.31□□□□□ -2.36
CTNNA1P35221 MIR1287-201ENST00000408492 90 ntBASIC0.31□□□□□ -2.36
CTNNA1P35221 RNA5SP436-201ENST00000516020 115 ntBASIC0.31□□□□□ -2.36
CTNNA1P35221 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
CTNNA1P35221 AL365265.1-201ENST00000621045 234 ntBASIC0.31□□□□□ -2.36
CTNNA1P35221 MIR376A2-201ENST00000636782 80 ntBASIC0.31□□□□□ -2.36
CTNNA1P35221 MIR302B-201ENST00000362188 73 ntBASIC0.3□□□□□ -2.36
CTNNA1P35221 RNU6-103P-201ENST00000363686 107 ntBASIC0.3□□□□□ -2.36
CTNNA1P35221 Y_RNA.199-201ENST00000364014 102 ntBASIC0.3□□□□□ -2.36
CTNNA1P35221 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
CTNNA1P35221 RNU6-728P-201ENST00000365375 104 ntBASIC0.3□□□□□ -2.36
CTNNA1P35221 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CTNNA1P35221 RNU6-679P-201ENST00000391003 106 ntBASIC0.3□□□□□ -2.36
CTNNA1P35221 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.3□□□□□ -2.36
CTNNA1P35221 RNU7-156P-201ENST00000517214 74 ntBASIC0.3□□□□□ -2.36
CTNNA1P35221 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CTNNA1P35221 Y_RNA.176-201ENST00000363815 109 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 Y_RNA.351-201ENST00000365436 96 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 Y_RNA.461-201ENST00000384263 103 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 SNORA79-201ENST00000408376 140 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 MIR548F4-201ENST00000408515 105 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 SNORA25.12-201ENST00000516202 82 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 Y_RNA.679-201ENST00000516416 91 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 RNU6-635P-201ENST00000516651 102 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 RNA5SP94-201ENST00000516917 108 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 RNU6-448P-201ENST00000517052 107 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 AP003327.1-201ENST00000529684 127 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 AL442663.2-201ENST00000554385 511 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 SNORA4-201ENST00000584302 138 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 AL662814.1-201ENST00000617364 121 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 uc_338.16-201ENST00000621804 95 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 AC091932.4-201ENST00000623386 200 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 MIR6841-201ENST00000637129 72 ntBASIC0.29□□□□□ -2.36
CTNNA1P35221 Y_RNA.352-201ENST00000365439 102 ntBASIC0.28□□□□□ -2.36
CTNNA1P35221 RNU6-472P-201ENST00000384299 107 ntBASIC0.28□□□□□ -2.36
CTNNA1P35221 Y_RNA.483-201ENST00000384380 101 ntBASIC0.28□□□□□ -2.36
CTNNA1P35221 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.36
CTNNA1P35221 MT-TW-201ENST00000387382 68 ntBASIC0.28□□□□□ -2.36
CTNNA1P35221 MIR1302-6-201ENST00000408466 90 ntBASIC0.28□□□□□ -2.36
CTNNA1P35221 Y_RNA.618-201ENST00000410949 107 ntBASIC0.28□□□□□ -2.36
CTNNA1P35221 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.28□□□□□ -2.36
CTNNA1P35221 Y_RNA.720-201ENST00000517166 92 ntBASIC0.28□□□□□ -2.36
CTNNA1P35221 MIR4711-201ENST00000578274 70 ntBASIC0.28□□□□□ -2.36
CTNNA1P35221 MIR3129-201ENST00000581095 76 ntBASIC0.28□□□□□ -2.36
CTNNA1P35221 Y_RNA.42-201ENST00000362660 108 ntBASIC0.27□□□□□ -2.37
CTNNA1P35221 Y_RNA.116-201ENST00000363292 103 ntBASIC0.27□□□□□ -2.37
CTNNA1P35221 Y_RNA.262-201ENST00000364641 102 ntBASIC0.27□□□□□ -2.37
CTNNA1P35221 RNA5SP517-201ENST00000364724 117 ntBASIC0.27□□□□□ -2.37
CTNNA1P35221 Y_RNA.512-201ENST00000384518 102 ntBASIC0.27□□□□□ -2.37
CTNNA1P35221 Y_RNA.574-201ENST00000384766 95 ntBASIC0.27□□□□□ -2.37
CTNNA1P35221 SNORA40.8-201ENST00000411034 126 ntBASIC0.27□□□□□ -2.37
CTNNA1P35221 AC011921.3-201ENST00000605540 361 ntBASIC0.27□□□□□ -2.37
CTNNA1P35221 MIR8066-201ENST00000617280 78 ntBASIC0.27□□□□□ -2.37
CTNNA1P35221 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.27□□□□□ -2.37
CTNNA1P35221 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.26□□□□□ -2.37
CTNNA1P35221 MIR342-201ENST00000362212 99 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 Y_RNA.226-201ENST00000364337 114 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 RNU6-1160P-201ENST00000384546 104 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 MIR936-201ENST00000401264 98 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 RNU7-45P-201ENST00000459460 63 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 snoU13.18-201ENST00000459483 104 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 RNU6-561P-201ENST00000516222 102 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 AC022523.2-201ENST00000561045 150 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 MIR3152-201ENST00000579801 74 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 AC006504.6-201ENST00000590142 199 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 AL442067.1-201ENST00000613261 223 ntBASIC0.26□□□□□ -2.37
CTNNA1P35221 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
CTNNA1P35221 Y_RNA.238-201ENST00000364441 102 ntBASIC0.25□□□□□ -2.37
CTNNA1P35221 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
CTNNA1P35221 RNA5SP237-201ENST00000410414 113 ntBASIC0.25□□□□□ -2.37
CTNNA1P35221 RNU6-863P-201ENST00000515989 104 ntBASIC0.25□□□□□ -2.37
CTNNA1P35221 AL589743.1-201ENST00000551932 2712 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 RNU6-978P-201ENST00000364371 103 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 Y_RNA.269-201ENST00000364685 89 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 RNA5SP117-201ENST00000365294 118 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 VTRNA1-3-201ENST00000365645 89 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 Y_RNA.416-201ENST00000384014 113 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 SNORA20-201ENST00000384662 132 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 RNU4-83P-201ENST00000410863 133 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 MTATP8P1-201ENST00000467115 207 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 SNORD116-25-201ENST00000516517 92 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 RNU6-1153P-201ENST00000516760 105 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 RNU6-765P-201ENST00000516916 99 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 AP003072.1-201ENST00000531740 145 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.24□□□□□ -2.37
CTNNA1P35221 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.24□□□□□ -2.37
CTNNA1P35221 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CTNNA1P35221 RNU6-349P-201ENST00000362402 107 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 SNORD118-201ENST00000363593 134 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 Y_RNA.326-201ENST00000365176 113 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 SNORA8.2-201ENST00000384372 139 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 SNORD93-201ENST00000408813 74 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms