Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MIR342-201ENST00000362212 99 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.82-201ENST00000363000 102 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.92-201ENST00000363043 102 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.235-201ENST00000364412 102 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.306-201ENST00000365015 102 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.312-201ENST00000365089 102 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.322-201ENST00000365151 102 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 MIR616-201ENST00000385293 97 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 AL606845.1-201ENST00000404881 255 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 SNORA40.8-201ENST00000411034 126 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.650-201ENST00000459002 102 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.777-201ENST00000516982 102 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 RNU6-448P-201ENST00000517052 107 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.23□□□□□ -2.37
SHMT2P34897 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.771-201ENST00000598668 102 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 MIR8066-201ENST00000617280 78 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.789-201ENST00000622480 102 ntBASIC0.23□□□□□ -2.37
SHMT2P34897 Y_RNA.42-201ENST00000362660 108 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 RNU6-653P-201ENST00000363074 106 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 Y_RNA.237-201ENST00000364439 102 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 SNORA33.2-201ENST00000365413 134 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 RNU6-1228P-201ENST00000391014 107 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 SNORD71-201ENST00000411292 86 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.22□□□□□ -2.37
SHMT2P34897 MTCYBP6-201ENST00000441810 138 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 TRBVB-201ENST00000477100 408 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.22□□□□□ -2.37
SHMT2P34897 SNORA25.12-201ENST00000516202 82 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 MIR5197-201ENST00000583721 112 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 AL356055.1-201ENST00000602528 446 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 SNORA25.18-201ENST00000607153 114 ntBASIC0.22□□□□□ -2.37
SHMT2P34897 Y_RNA.36-201ENST00000362602 112 ntBASIC0.21□□□□□ -2.38
SHMT2P34897 SNORD44.1-201ENST00000363202 61 ntBASIC0.21□□□□□ -2.38
SHMT2P34897 Y_RNA.202-201ENST00000364083 110 ntBASIC0.21□□□□□ -2.38
SHMT2P34897 RNU6-597P-201ENST00000365620 102 ntBASIC0.21□□□□□ -2.38
SHMT2P34897 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
SHMT2P34897 Y_RNA.540-201ENST00000384638 111 ntBASIC0.21□□□□□ -2.38
SHMT2P34897 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
SHMT2P34897 AL662814.1-201ENST00000617364 121 ntBASIC0.21□□□□□ -2.38
SHMT2P34897 uc_338.16-201ENST00000621804 95 ntBASIC0.21□□□□□ -2.38
SHMT2P34897 MIR302B-201ENST00000362188 73 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 SNORD118-201ENST00000363593 134 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 Y_RNA.351-201ENST00000365436 96 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 Y_RNA.542-201ENST00000384641 111 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 MIR193B-201ENST00000384907 83 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 RNU6-381P-201ENST00000391259 108 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 AC022523.2-201ENST00000561045 150 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 AC133485.4-201ENST00000561835 220 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 MIR3678-201ENST00000578455 94 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 MIR3129-201ENST00000581095 76 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 AC091932.4-201ENST00000623386 200 ntBASIC0.2□□□□□ -2.38
SHMT2P34897 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
SHMT2P34897 Y_RNA.199-201ENST00000364014 102 ntBASIC0.19□□□□□ -2.38
SHMT2P34897 RNA5SP117-201ENST00000365294 118 ntBASIC0.19□□□□□ -2.38
SHMT2P34897 Y_RNA.430-201ENST00000384081 110 ntBASIC0.19□□□□□ -2.38
SHMT2P34897 Y_RNA.567-201ENST00000384736 106 ntBASIC0.19□□□□□ -2.38
SHMT2P34897 RNA5SP261-201ENST00000410536 106 ntBASIC0.19□□□□□ -2.38
SHMT2P34897 RNU4-83P-201ENST00000410863 133 ntBASIC0.19□□□□□ -2.38
SHMT2P34897 AP003327.1-201ENST00000529684 127 ntBASIC0.19□□□□□ -2.38
SHMT2P34897 MIR4282-201ENST00000583613 67 ntBASIC0.19□□□□□ -2.38
SHMT2P34897 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.19□□□□□ -2.38
SHMT2P34897 MIR924-201ENST00000638017 53 ntBASIC0.19□□□□□ -2.38
SHMT2P34897 MIR335-201ENST00000362173 94 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 SNORA36.1-201ENST00000363424 132 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 RNU6-639P-201ENST00000384074 107 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 RNU6-1109P-201ENST00000391187 107 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 SNORD93-201ENST00000408813 74 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 Y_RNA.617-201ENST00000410920 90 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.18□□□□□ -2.38
SHMT2P34897 RNU6-561P-201ENST00000516222 102 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 AL365205.2-201ENST00000594586 68 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 AC078938.1-201ENST00000620993 318 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 AL365265.1-201ENST00000621045 234 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 MIR6841-201ENST00000637129 72 ntBASIC0.18□□□□□ -2.38
SHMT2P34897 RNU4-17P-201ENST00000365598 141 ntBASIC0.17□□□□□ -2.38
SHMT2P34897 RNU6-1292P-201ENST00000383856 107 ntBASIC0.17□□□□□ -2.38
SHMT2P34897 Y_RNA.512-201ENST00000384518 102 ntBASIC0.17□□□□□ -2.38
SHMT2P34897 RNU6-713P-201ENST00000384761 107 ntBASIC0.17□□□□□ -2.38
SHMT2P34897 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.17□□□□□ -2.38
SHMT2P34897 Y_RNA.590-201ENST00000410140 107 ntBASIC0.17□□□□□ -2.38
SHMT2P34897 RNA5SP237-201ENST00000410414 113 ntBASIC0.17□□□□□ -2.38
SHMT2P34897 RNU7-80P-201ENST00000459562 61 ntBASIC0.17□□□□□ -2.38
SHMT2P34897 RNA5SP480-201ENST00000516840 109 ntBASIC0.17□□□□□ -2.38
SHMT2P34897 AL442663.2-201ENST00000554385 511 ntBASIC0.17□□□□□ -2.38
SHMT2P34897 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
SHMT2P34897 SNORD114-26-201ENST00000363543 72 ntBASIC0.16□□□□□ -2.38
SHMT2P34897 Y_RNA.176-201ENST00000363815 109 ntBASIC0.16□□□□□ -2.38
SHMT2P34897 Y_RNA.454-201ENST00000384224 113 ntBASIC0.16□□□□□ -2.38
SHMT2P34897 Y_RNA.518-201ENST00000384552 113 ntBASIC0.16□□□□□ -2.38
SHMT2P34897 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
SHMT2P34897 U8.15-201ENST00000390947 134 ntBASIC0.16□□□□□ -2.38
SHMT2P34897 AC096949.1-201ENST00000412047 152 ntBASIC0.16□□□□□ -2.38
SHMT2P34897 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
SHMT2P34897 Y_RNA.701-201ENST00000516812 110 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 259.2 ms