Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 Y_RNA.355-201ENST00000365462 98 ntBASIC0.84□□□□□ -2.27
PTPN3P26045 RNU6-643P-201ENST00000384018 107 ntBASIC0.84□□□□□ -2.27
PTPN3P26045 MIR548I3-201ENST00000408378 149 ntBASIC0.84□□□□□ -2.27
PTPN3P26045 MTND5P15-201ENST00000434246 349 ntBASIC0.84□□□□□ -2.27
PTPN3P26045 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
PTPN3P26045 RNU6-1336P-201ENST00000383886 109 ntBASIC0.83□□□□□ -2.28
PTPN3P26045 RNU6-42P-201ENST00000384165 107 ntBASIC0.83□□□□□ -2.28
PTPN3P26045 SNORD89-201ENST00000390981 114 ntBASIC0.83□□□□□ -2.28
PTPN3P26045 MIR1827-201ENST00000408549 66 ntBASIC0.83□□□□□ -2.28
PTPN3P26045 Y_RNA.793-201ENST00000411222 111 ntBASIC0.83□□□□□ -2.28
PTPN3P26045 AC006461.1-201ENST00000412637 326 ntBASIC0.83□□□□□ -2.28
PTPN3P26045 AC090844.1-201ENST00000422019 156 ntBASIC0.83□□□□□ -2.28
PTPN3P26045 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
PTPN3P26045 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.83□□□□□ -2.28
PTPN3P26045 MRPS18CP4-201ENST00000535821 231 ntBASIC0.83□□□□□ -2.28
PTPN3P26045 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PTPN3P26045 RNU1-93P-201ENST00000364704 169 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 RNU6-1318P-201ENST00000365389 103 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 Y_RNA.454-201ENST00000384224 113 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 SEPT7P4-201ENST00000437076 306 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 AL138752.1-201ENST00000452964 351 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 RNU2-11P-201ENST00000459191 187 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 RNU7-80P-201ENST00000459562 61 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 RNU6-861P-201ENST00000516745 106 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 AP002392.1-201ENST00000537692 208 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.82□□□□□ -2.28
PTPN3P26045 AC025627.3-201ENST00000582078 182 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 AL136317.1-201ENST00000612653 226 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 MIR6734-201ENST00000621166 68 ntBASIC0.82□□□□□ -2.28
PTPN3P26045 SNORD38B-201ENST00000384690 67 ntBASIC0.81□□□□□ -2.28
PTPN3P26045 MIR624-201ENST00000385217 97 ntBASIC0.81□□□□□ -2.28
PTPN3P26045 AC244023.1-201ENST00000426884 112 ntBASIC0.81□□□□□ -2.28
PTPN3P26045 AC074198.2-201ENST00000508153 258 ntBASIC0.81□□□□□ -2.28
PTPN3P26045 AC242498.1-201ENST00000604134 111 ntBASIC0.81□□□□□ -2.28
PTPN3P26045 AC004792.1-201ENST00000614523 137 ntBASIC0.81□□□□□ -2.28
PTPN3P26045 SNORD38B-202ENST00000625943 69 ntBASIC0.81□□□□□ -2.28
PTPN3P26045 MIR342-201ENST00000362212 99 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 RNU6-682P-201ENST00000363843 106 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 SNORA1.1-201ENST00000364671 133 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 RNU6-597P-201ENST00000365620 102 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 SNORA26.6-201ENST00000391256 115 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 RNA5SP261-201ENST00000410536 106 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 RNA5SP127-201ENST00000411051 133 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 AC113410.1-201ENST00000505029 247 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 SNORA81.3-201ENST00000517283 198 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 MIR4431-201ENST00000579990 94 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 AC072026.1-201ENST00000605023 201 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 MIR7111-201ENST00000619751 72 ntBASIC0.8□□□□□ -2.28
PTPN3P26045 Y_RNA.29-201ENST00000362570 113 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 RNU6-312P-201ENST00000364629 107 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 SNORD114-22-201ENST00000365423 72 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 Y_RNA.351-201ENST00000365436 96 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 Y_RNA.430-201ENST00000384081 110 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 RNU6-602P-201ENST00000411155 105 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 RNU5E-9P-201ENST00000411164 104 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 RNU7-120P-201ENST00000459334 63 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.79□□□□□ -2.28
PTPN3P26045 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.79□□□□□ -2.28
PTPN3P26045 MIR3671-201ENST00000580455 88 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 SNORA4-201ENST00000584302 138 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 AC091932.4-201ENST00000623386 200 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
PTPN3P26045 MIR1-1-201ENST00000362147 71 ntBASIC0.78□□□□□ -2.28
PTPN3P26045 RNU6-1082P-201ENST00000364574 107 ntBASIC0.78□□□□□ -2.28
PTPN3P26045 Y_RNA.521-201ENST00000384560 114 ntBASIC0.78□□□□□ -2.28
PTPN3P26045 RNU6-768P-201ENST00000384683 107 ntBASIC0.78□□□□□ -2.28
PTPN3P26045 MIR563-201ENST00000385080 79 ntBASIC0.78□□□□□ -2.28
PTPN3P26045 RNU6-205P-201ENST00000390858 107 ntBASIC0.78□□□□□ -2.28
PTPN3P26045 HMGN1P33-201ENST00000432945 451 ntBASIC0.78□□□□□ -2.28
PTPN3P26045 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
PTPN3P26045 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
PTPN3P26045 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
PTPN3P26045 RNU6-369P-201ENST00000362515 102 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 Y_RNA.240-201ENST00000364469 95 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 RNU6-1335P-201ENST00000365426 107 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 Y_RNA.785-201ENST00000384290 109 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 RNU6-110P-201ENST00000384508 104 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 RNU6-1190P-201ENST00000410811 104 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 RNU7-62P-201ENST00000458856 62 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 snoU13.21-201ENST00000459368 105 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 RNU7-45P-201ENST00000459460 63 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 SCARNA15-202ENST00000516881 127 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 AC104465.1-201ENST00000611365 139 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 MIR6717-201ENST00000622747 73 ntBASIC0.77□□□□□ -2.29
PTPN3P26045 MTND5P32-201ENST00000560711 1802 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 MIR302B-201ENST00000362188 73 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 RNY1P11-201ENST00000363759 113 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 SNORA25.7-201ENST00000364375 127 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 RNU6-818P-201ENST00000364837 108 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 Y_RNA.354-201ENST00000365448 111 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 MIR100-201ENST00000385259 80 ntBASIC0.76□□□□□ -2.29
PTPN3P26045 RNU6-1319P-201ENST00000390855 104 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 260.5 ms