Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 Y_RNA.537-201ENST00000384626 109 ntBASIC1.28□□□□□ -2.2
MMP3P08254 MIR569-201ENST00000385228 96 ntBASIC1.28□□□□□ -2.2
MMP3P08254 MIR513C-201ENST00000401352 84 ntBASIC1.28□□□□□ -2.2
MMP3P08254 AL035398.1-201ENST00000430869 322 ntBASIC1.28□□□□□ -2.2
MMP3P08254 RNU7-197P-201ENST00000458836 62 ntBASIC1.28□□□□□ -2.2
MMP3P08254 RNU6-1223P-201ENST00000517124 104 ntBASIC1.28□□□□□ -2.2
MMP3P08254 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.28□□□□□ -2.2
MMP3P08254 MIR3133-201ENST00000583157 78 ntBASIC1.28□□□□□ -2.2
MMP3P08254 MIR6788-201ENST00000618842 66 ntBASIC1.28□□□□□ -2.2
MMP3P08254 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.21
MMP3P08254 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.27□□□□□ -2.21
MMP3P08254 SNORA24-201ENST00000384096 131 ntBASIC1.27□□□□□ -2.21
MMP3P08254 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
MMP3P08254 RNU6-125P-201ENST00000384505 107 ntBASIC1.27□□□□□ -2.21
MMP3P08254 RNU6-1067P-201ENST00000384752 107 ntBASIC1.27□□□□□ -2.21
MMP3P08254 Y_RNA.584-201ENST00000391090 114 ntBASIC1.27□□□□□ -2.21
MMP3P08254 AC090844.1-201ENST00000422019 156 ntBASIC1.27□□□□□ -2.21
MMP3P08254 RNU7-96P-201ENST00000459535 64 ntBASIC1.27□□□□□ -2.21
MMP3P08254 RNU5E-3P-201ENST00000515913 68 ntBASIC1.27□□□□□ -2.21
MMP3P08254 RNU7-70P-201ENST00000516941 66 ntBASIC1.27□□□□□ -2.21
MMP3P08254 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.27□□□□□ -2.21
MMP3P08254 MIR548X2-201ENST00000579776 100 ntBASIC1.27□□□□□ -2.21
MMP3P08254 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
MMP3P08254 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
MMP3P08254 MIR103A2-201ENST00000362154 78 ntBASIC1.26□□□□□ -2.21
MMP3P08254 MIR302B-201ENST00000362188 73 ntBASIC1.26□□□□□ -2.21
MMP3P08254 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
MMP3P08254 Y_RNA.488-201ENST00000384403 102 ntBASIC1.26□□□□□ -2.21
MMP3P08254 MIR222-201ENST00000384992 110 ntBASIC1.26□□□□□ -2.21
MMP3P08254 MIR1185-1-201ENST00000408598 86 ntBASIC1.26□□□□□ -2.21
MMP3P08254 MIR1302-7-201ENST00000408841 72 ntBASIC1.26□□□□□ -2.21
MMP3P08254 AC245047.7-201ENST00000440265 293 ntBASIC1.26□□□□□ -2.21
MMP3P08254 AC087343.1-201ENST00000477341 475 ntBASIC1.26□□□□□ -2.21
MMP3P08254 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
MMP3P08254 MIR8065-201ENST00000620577 100 ntBASIC1.26□□□□□ -2.21
MMP3P08254 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
MMP3P08254 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
MMP3P08254 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
MMP3P08254 RNU1-133P-201ENST00000364867 167 ntBASIC1.25□□□□□ -2.21
MMP3P08254 Y_RNA.363-201ENST00000365529 113 ntBASIC1.25□□□□□ -2.21
MMP3P08254 Y_RNA.420-201ENST00000384043 110 ntBASIC1.25□□□□□ -2.21
MMP3P08254 RNU6-187P-201ENST00000384139 106 ntBASIC1.25□□□□□ -2.21
MMP3P08254 RNU6-910P-201ENST00000390844 107 ntBASIC1.25□□□□□ -2.21
MMP3P08254 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.25□□□□□ -2.21
MMP3P08254 MIR548J-201ENST00000408833 112 ntBASIC1.25□□□□□ -2.21
MMP3P08254 RNA5SP236-201ENST00000516169 116 ntBASIC1.25□□□□□ -2.21
MMP3P08254 RNU7-53P-201ENST00000516705 60 ntBASIC1.25□□□□□ -2.21
MMP3P08254 PVT1_3.1-201ENST00000620853 95 ntBASIC1.25□□□□□ -2.21
MMP3P08254 RNA5SP264-201ENST00000363115 107 ntBASIC1.24□□□□□ -2.21
MMP3P08254 SNORD114-26-201ENST00000363543 72 ntBASIC1.24□□□□□ -2.21
MMP3P08254 RNU6-915P-201ENST00000364943 103 ntBASIC1.24□□□□□ -2.21
MMP3P08254 RNA5SP95-201ENST00000410319 137 ntBASIC1.24□□□□□ -2.21
MMP3P08254 SUMO1P3-201ENST00000439961 304 ntBASIC1.24□□□□□ -2.21
MMP3P08254 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
MMP3P08254 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.24□□□□□ -2.21
MMP3P08254 RNU6-654P-201ENST00000364373 107 ntBASIC1.23□□□□□ -2.21
MMP3P08254 RNU6-309P-201ENST00000364573 106 ntBASIC1.23□□□□□ -2.21
MMP3P08254 Y_RNA.294-201ENST00000364916 102 ntBASIC1.23□□□□□ -2.21
MMP3P08254 SNORA75.2-201ENST00000391138 150 ntBASIC1.23□□□□□ -2.21
MMP3P08254 SNORA75.3-201ENST00000391231 150 ntBASIC1.23□□□□□ -2.21
MMP3P08254 snoU13.16-201ENST00000459350 104 ntBASIC1.23□□□□□ -2.21
MMP3P08254 RNU7-80P-201ENST00000459562 61 ntBASIC1.23□□□□□ -2.21
MMP3P08254 Y_RNA.690-201ENST00000516603 95 ntBASIC1.23□□□□□ -2.21
MMP3P08254 AL020996.3-201ENST00000606617 222 ntBASIC1.23□□□□□ -2.21
MMP3P08254 Y_RNA.330-201ENST00000365230 109 ntBASIC1.22□□□□□ -2.21
MMP3P08254 MIR598-201ENST00000384868 97 ntBASIC1.22□□□□□ -2.21
MMP3P08254 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.22□□□□□ -2.21
MMP3P08254 RNU6-1054P-201ENST00000411293 104 ntBASIC1.22□□□□□ -2.21
MMP3P08254 RNU7-73P-201ENST00000458743 63 ntBASIC1.22□□□□□ -2.21
MMP3P08254 Y_RNA.651-201ENST00000459380 103 ntBASIC1.22□□□□□ -2.21
MMP3P08254 RPS23P4-201ENST00000487908 423 ntBASIC1.22□□□□□ -2.21
MMP3P08254 RNU6-113P-201ENST00000516653 101 ntBASIC1.22□□□□□ -2.21
MMP3P08254 AP003716.2-201ENST00000528260 108 ntBASIC1.22□□□□□ -2.21
MMP3P08254 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.22□□□□□ -2.21
MMP3P08254 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
MMP3P08254 AL022345.2-201ENST00000606307 135 ntBASIC1.22□□□□□ -2.21
MMP3P08254 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.21
MMP3P08254 RNY1P5-201ENST00000383890 115 ntBASIC1.21□□□□□ -2.22
MMP3P08254 Y_RNA.454-201ENST00000384224 113 ntBASIC1.21□□□□□ -2.22
MMP3P08254 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
MMP3P08254 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
MMP3P08254 Y_RNA.703-201ENST00000516846 111 ntBASIC1.21□□□□□ -2.22
MMP3P08254 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.21□□□□□ -2.22
MMP3P08254 MIR6516-201ENST00000630554 81 ntBASIC1.21□□□□□ -2.22
MMP3P08254 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MMP3P08254 Y_RNA.120-201ENST00000363304 110 ntBASIC1.2□□□□□ -2.22
MMP3P08254 SNORA1.1-201ENST00000364671 133 ntBASIC1.2□□□□□ -2.22
MMP3P08254 SNORD18B-201ENST00000365659 72 ntBASIC1.2□□□□□ -2.22
MMP3P08254 RNU6-342P-201ENST00000384521 104 ntBASIC1.2□□□□□ -2.22
MMP3P08254 RNU6-205P-201ENST00000390858 107 ntBASIC1.2□□□□□ -2.22
MMP3P08254 SNORA26.6-201ENST00000391256 115 ntBASIC1.2□□□□□ -2.22
MMP3P08254 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.2□□□□□ -2.22
MMP3P08254 AL392103.1-201ENST00000447000 198 ntBASIC1.2□□□□□ -2.22
MMP3P08254 RNU6-240P-201ENST00000516098 97 ntBASIC1.2□□□□□ -2.22
MMP3P08254 AC019288.1-201ENST00000557918 224 ntBASIC1.2□□□□□ -2.22
MMP3P08254 MIR6779-201ENST00000617283 64 ntBASIC1.2□□□□□ -2.22
MMP3P08254 RNU6-690P-201ENST00000365242 106 ntBASIC1.19□□□□□ -2.22
MMP3P08254 RNY1P6-201ENST00000384193 109 ntBASIC1.19□□□□□ -2.22
MMP3P08254 MIR548M-201ENST00000408260 86 ntBASIC1.19□□□□□ -2.22
MMP3P08254 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 321.3 ms