Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 Y_RNA.360-201ENST00000365512 102 ntBASIC2.14□□□□□ -2.07
SYPP08247 RNU6-409P-201ENST00000384114 104 ntBASIC2.14□□□□□ -2.07
SYPP08247 RNU6-616P-201ENST00000384353 107 ntBASIC2.14□□□□□ -2.07
SYPP08247 SNORD77B-201ENST00000391112 67 ntBASIC2.14□□□□□ -2.07
SYPP08247 SNORD23.1-201ENST00000408212 104 ntBASIC2.14□□□□□ -2.07
SYPP08247 RNU6-733P-201ENST00000410759 104 ntBASIC2.14□□□□□ -2.07
SYPP08247 AC004965.1-201ENST00000413033 213 ntBASIC2.14□□□□□ -2.07
SYPP08247 AL161935.2-201ENST00000414627 60 ntBASIC2.14□□□□□ -2.07
SYPP08247 AL353813.1-201ENST00000440700 253 ntBASIC2.14□□□□□ -2.07
SYPP08247 MIR4694-201ENST00000578534 80 ntBASIC2.14□□□□□ -2.07
SYPP08247 MIR4764-201ENST00000580680 88 ntBASIC2.14□□□□□ -2.07
SYPP08247 AC008133.2-201ENST00000624540 351 ntBASIC2.14□□□□□ -2.07
SYPP08247 MIR2052-201ENST00000636055 55 ntBASIC2.14□□□□□ -2.07
SYPP08247 MIR21-201ENST00000362134 72 ntBASIC2.13□□□□□ -2.07
SYPP08247 RNU6-294P-201ENST00000364999 102 ntBASIC2.13□□□□□ -2.07
SYPP08247 Y_RNA.466-201ENST00000384294 113 ntBASIC2.13□□□□□ -2.07
SYPP08247 MIR144-201ENST00000384886 86 ntBASIC2.13□□□□□ -2.07
SYPP08247 MIR577-201ENST00000385196 96 ntBASIC2.13□□□□□ -2.07
SYPP08247 MIR653-201ENST00000385279 96 ntBASIC2.13□□□□□ -2.07
SYPP08247 U8.13-201ENST00000390842 128 ntBASIC2.13□□□□□ -2.07
SYPP08247 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
SYPP08247 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.13□□□□□ -2.07
SYPP08247 RPS3AP1-201ENST00000413190 320 ntBASIC2.13□□□□□ -2.07
SYPP08247 RNA5SP57-201ENST00000459463 123 ntBASIC2.13□□□□□ -2.07
SYPP08247 SCARNA23-201ENST00000516060 130 ntBASIC2.13□□□□□ -2.07
SYPP08247 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SYPP08247 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SYPP08247 Y_RNA.107-201ENST00000363190 121 ntBASIC2.12□□□□□ -2.07
SYPP08247 Y_RNA.140-201ENST00000363474 103 ntBASIC2.12□□□□□ -2.07
SYPP08247 SNORA1.1-201ENST00000364671 133 ntBASIC2.12□□□□□ -2.07
SYPP08247 MIR605-201ENST00000385078 83 ntBASIC2.12□□□□□ -2.07
SYPP08247 AL023284.1-201ENST00000403956 276 ntBASIC2.12□□□□□ -2.07
SYPP08247 Y_RNA.601-201ENST00000410500 113 ntBASIC2.12□□□□□ -2.07
SYPP08247 RNA5SP247-201ENST00000411181 105 ntBASIC2.12□□□□□ -2.07
SYPP08247 FAM71BP1-201ENST00000604431 523 ntBASIC2.12□□□□□ -2.07
SYPP08247 Z97988.1-201ENST00000637697 135 ntBASIC2.12□□□□□ -2.07
SYPP08247 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
SYPP08247 ZNF355P-201ENST00000427301 3216 ntBASIC2.11□□□□□ -2.07
SYPP08247 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
SYPP08247 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
SYPP08247 RNU6-832P-201ENST00000363319 107 ntBASIC2.11□□□□□ -2.07
SYPP08247 SNORA6-201ENST00000384033 151 ntBASIC2.11□□□□□ -2.07
SYPP08247 MIR583-201ENST00000384846 75 ntBASIC2.11□□□□□ -2.07
SYPP08247 MIR520C-201ENST00000385005 87 ntBASIC2.11□□□□□ -2.07
SYPP08247 RNU6-679P-201ENST00000391003 106 ntBASIC2.11□□□□□ -2.07
SYPP08247 MIR1302-4-201ENST00000408701 150 ntBASIC2.11□□□□□ -2.07
SYPP08247 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.11□□□□□ -2.07
SYPP08247 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.11□□□□□ -2.07
SYPP08247 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.11□□□□□ -2.07
SYPP08247 AC121758.2-201ENST00000553271 193 ntBASIC2.11□□□□□ -2.07
SYPP08247 AP000942.3-201ENST00000603702 160 ntBASIC2.11□□□□□ -2.07
SYPP08247 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.11□□□□□ -2.07
SYPP08247 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.11□□□□□ -2.07
SYPP08247 AP000648.3-201ENST00000623539 4507 ntBASIC2.1□□□□□ -2.07
SYPP08247 MIRLET7G-201ENST00000362280 84 ntBASIC2.1□□□□□ -2.07
SYPP08247 Y_RNA.10-201ENST00000362371 110 ntBASIC2.1□□□□□ -2.07
SYPP08247 RNA5SP276-201ENST00000362580 94 ntBASIC2.1□□□□□ -2.07
SYPP08247 SNORA32-201ENST00000384072 121 ntBASIC2.1□□□□□ -2.07
SYPP08247 SNORA7.5-201ENST00000410672 110 ntBASIC2.1□□□□□ -2.07
SYPP08247 MIR8065-201ENST00000620577 100 ntBASIC2.1□□□□□ -2.07
SYPP08247 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYPP08247 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYPP08247 SNORD73B-201ENST00000364394 72 ntBASIC2.09□□□□□ -2.07
SYPP08247 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.09□□□□□ -2.07
SYPP08247 RNA5SP212-201ENST00000391223 107 ntBASIC2.09□□□□□ -2.07
SYPP08247 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.09□□□□□ -2.07
SYPP08247 MIR5694-201ENST00000581190 76 ntBASIC2.09□□□□□ -2.07
SYPP08247 MALAT1.1-201ENST00000618249 95 ntBASIC2.09□□□□□ -2.07
SYPP08247 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.09□□□□□ -2.07
SYPP08247 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SYPP08247 Y_RNA.220-201ENST00000364244 109 ntBASIC2.08□□□□□ -2.08
SYPP08247 Y_RNA.342-201ENST00000365352 113 ntBASIC2.08□□□□□ -2.08
SYPP08247 RNU6-342P-201ENST00000384521 104 ntBASIC2.08□□□□□ -2.08
SYPP08247 RNY1P7-201ENST00000384743 110 ntBASIC2.08□□□□□ -2.08
SYPP08247 JTBP1-201ENST00000441314 247 ntBASIC2.08□□□□□ -2.08
SYPP08247 RNU6-322P-201ENST00000516010 103 ntBASIC2.08□□□□□ -2.08
SYPP08247 RNA5SP182-201ENST00000516064 82 ntBASIC2.08□□□□□ -2.08
SYPP08247 RNU6-1018P-201ENST00000516577 106 ntBASIC2.08□□□□□ -2.08
SYPP08247 RNU6-521P-201ENST00000516663 105 ntBASIC2.08□□□□□ -2.08
SYPP08247 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.08□□□□□ -2.08
SYPP08247 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.08□□□□□ -2.08
SYPP08247 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SYPP08247 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SYPP08247 SNORA16B-201ENST00000364674 135 ntBASIC2.07□□□□□ -2.08
SYPP08247 Y_RNA.354-201ENST00000365448 111 ntBASIC2.07□□□□□ -2.08
SYPP08247 Y_RNA.377-201ENST00000365644 108 ntBASIC2.07□□□□□ -2.08
SYPP08247 RNU6-439P-201ENST00000384188 106 ntBASIC2.07□□□□□ -2.08
SYPP08247 Y_RNA.558-201ENST00000384685 113 ntBASIC2.07□□□□□ -2.08
SYPP08247 RNU6-602P-201ENST00000411155 105 ntBASIC2.07□□□□□ -2.08
SYPP08247 AC108729.3-201ENST00000513484 108 ntBASIC2.07□□□□□ -2.08
SYPP08247 RNU7-41P-201ENST00000515917 61 ntBASIC2.07□□□□□ -2.08
SYPP08247 MIR548AO-201ENST00000579992 96 ntBASIC2.07□□□□□ -2.08
SYPP08247 AL442128.1-201ENST00000615151 90 ntBASIC2.07□□□□□ -2.08
SYPP08247 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SYPP08247 RNU6-1201P-201ENST00000384227 107 ntBASIC2.06□□□□□ -2.08
SYPP08247 MIR513A1-201ENST00000385138 129 ntBASIC2.06□□□□□ -2.08
SYPP08247 AC096949.1-201ENST00000412047 152 ntBASIC2.06□□□□□ -2.08
SYPP08247 AC245047.7-201ENST00000440265 293 ntBASIC2.06□□□□□ -2.08
SYPP08247 RNU7-35P-201ENST00000517174 62 ntBASIC2.06□□□□□ -2.08
SYPP08247 RNU6-844P-201ENST00000517175 102 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 334.1 ms