Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.38□□□□□ -2.63
HMGB3O15347 RNU7-74P-201ENST00000459104 62 ntBASIC-1.38□□□□□ -2.63
HMGB3O15347 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.38□□□□□ -2.63
HMGB3O15347 RNU7-80P-201ENST00000459562 61 ntBASIC-1.38□□□□□ -2.63
HMGB3O15347 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.38□□□□□ -2.63
HMGB3O15347 MIR4280-201ENST00000582178 76 ntBASIC-1.38□□□□□ -2.63
HMGB3O15347 MIR4473-201ENST00000583731 91 ntBASIC-1.38□□□□□ -2.63
HMGB3O15347 uc_338.19-201ENST00000616808 99 ntBASIC-1.38□□□□□ -2.63
HMGB3O15347 MIR1321-201ENST00000637766 79 ntBASIC-1.38□□□□□ -2.63
HMGB3O15347 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.39□□□□□ -2.63
HMGB3O15347 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.39□□□□□ -2.63
HMGB3O15347 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.39□□□□□ -2.63
HMGB3O15347 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.39□□□□□ -2.63
HMGB3O15347 SNORA20-201ENST00000384662 132 ntBASIC-1.39□□□□□ -2.63
HMGB3O15347 MIR378F-201ENST00000578143 78 ntBASIC-1.39□□□□□ -2.63
HMGB3O15347 MIR4499-201ENST00000584834 69 ntBASIC-1.39□□□□□ -2.63
HMGB3O15347 RNU7-10P-201ENST00000607194 63 ntBASIC-1.39□□□□□ -2.63
HMGB3O15347 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 MIR539-201ENST00000365690 78 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 MIR599-201ENST00000385069 95 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 MTND2P9-201ENST00000422293 931 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 MTND3P10-201ENST00000450967 341 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 SNORA13-201ENST00000458790 133 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 snoU13.19-201ENST00000459148 104 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 RNA5SP470-201ENST00000516463 106 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.4□□□□□ -2.63
HMGB3O15347 AC119751.7-201ENST00000600494 245 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 AC069503.3-201ENST00000618674 145 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 AC091932.4-201ENST00000623386 200 ntBASIC-1.4□□□□□ -2.63
HMGB3O15347 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.41□□□□□ -2.64
HMGB3O15347 RNU6-259P-201ENST00000383999 107 ntBASIC-1.41□□□□□ -2.64
HMGB3O15347 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.41□□□□□ -2.64
HMGB3O15347 RNU6-900P-201ENST00000384498 102 ntBASIC-1.41□□□□□ -2.64
HMGB3O15347 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.41□□□□□ -2.64
HMGB3O15347 RNA5SP395-201ENST00000516567 118 ntBASIC-1.41□□□□□ -2.64
HMGB3O15347 AC144568.1-201ENST00000520139 137 ntBASIC-1.41□□□□□ -2.64
HMGB3O15347 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.41□□□□□ -2.64
HMGB3O15347 U6.92-201ENST00000636464 89 ntBASIC-1.41□□□□□ -2.64
HMGB3O15347 MIR6086-201ENST00000638065 55 ntBASIC-1.41□□□□□ -2.64
HMGB3O15347 SNORD114-25-201ENST00000363742 72 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 RNU4-16P-201ENST00000364737 141 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 RNY1P2-201ENST00000364820 117 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 RNU6-30P-201ENST00000384561 107 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 SNORD56B-201ENST00000384713 71 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 DEFB108C-201ENST00000400154 252 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 AL500527.2-201ENST00000454105 95 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.42□□□□□ -2.64
HMGB3O15347 MTCO2P24-201ENST00000515611 426 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 RN7SKP19-201ENST00000516016 252 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 RNU6-397P-201ENST00000516226 104 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 RNU7-35P-201ENST00000517174 62 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 MIR3165-201ENST00000579874 75 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 MIR6851-201ENST00000617060 67 ntBASIC-1.42□□□□□ -2.64
HMGB3O15347 RNU4-80P-201ENST00000363200 141 ntBASIC-1.43□□□□□ -2.64
HMGB3O15347 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.43□□□□□ -2.64
HMGB3O15347 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.43□□□□□ -2.64
HMGB3O15347 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.43□□□□□ -2.64
HMGB3O15347 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.43□□□□□ -2.64
HMGB3O15347 MIR548K-201ENST00000408406 116 ntBASIC-1.43□□□□□ -2.64
HMGB3O15347 AC097635.1-201ENST00000450678 155 ntBASIC-1.43□□□□□ -2.64
HMGB3O15347 RPS29P25-201ENST00000481709 171 ntBASIC-1.43□□□□□ -2.64
HMGB3O15347 RN7SKP299-201ENST00000606679 301 ntBASIC-1.43□□□□□ -2.64
HMGB3O15347 AC021613.1-201ENST00000623880 111 ntBASIC-1.43□□□□□ -2.64
HMGB3O15347 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.44□□□□□ -2.64
HMGB3O15347 RNA5SP192-201ENST00000364404 120 ntBASIC-1.44□□□□□ -2.64
HMGB3O15347 RNU6-911P-201ENST00000516523 104 ntBASIC-1.44□□□□□ -2.64
HMGB3O15347 RNU7-4P-201ENST00000516961 62 ntBASIC-1.44□□□□□ -2.64
HMGB3O15347 MIR376A2-201ENST00000636782 80 ntBASIC-1.44□□□□□ -2.64
HMGB3O15347 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.45□□□□□ -2.64
HMGB3O15347 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.45□□□□□ -2.64
HMGB3O15347 RNU6-429P-201ENST00000384582 108 ntBASIC-1.45□□□□□ -2.64
HMGB3O15347 RPS3AP52-201ENST00000435639 297 ntBASIC-1.45□□□□□ -2.64
HMGB3O15347 TRAJ51-201ENST00000504127 63 ntBASIC-1.45□□□□□ -2.64
HMGB3O15347 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.45□□□□□ -2.64
HMGB3O15347 MTND5P40-201ENST00000559945 246 ntBASIC-1.45□□□□□ -2.64
HMGB3O15347 YWHAEP2-201ENST00000580066 112 ntBASIC-1.45□□□□□ -2.64
HMGB3O15347 AC098479.1-201ENST00000609225 154 ntBASIC-1.45□□□□□ -2.64
HMGB3O15347 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.46□□□□□ -2.64
HMGB3O15347 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.46□□□□□ -2.64
HMGB3O15347 RNU6-901P-201ENST00000384593 106 ntBASIC-1.46□□□□□ -2.64
HMGB3O15347 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
HMGB3O15347 AC093423.1-201ENST00000440817 142 ntBASIC-1.46□□□□□ -2.64
HMGB3O15347 RNA5SP67-201ENST00000516422 131 ntBASIC-1.46□□□□□ -2.64
HMGB3O15347 SNORD38.3-201ENST00000516599 73 ntBASIC-1.46□□□□□ -2.64
HMGB3O15347 RNU7-110P-201ENST00000516891 62 ntBASIC-1.46□□□□□ -2.64
HMGB3O15347 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
HMGB3O15347 AC006362.1-201ENST00000567392 174 ntBASIC-1.46□□□□□ -2.64
HMGB3O15347 RNU6-86P-201ENST00000606534 107 ntBASIC-1.46□□□□□ -2.64
HMGB3O15347 PISRT1.1-201ENST00000616930 107 ntBASIC-1.46□□□□□ -2.64
HMGB3O15347 RNU6-502P-201ENST00000362419 108 ntBASIC-1.47□□□□□ -2.64
HMGB3O15347 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.47□□□□□ -2.64
HMGB3O15347 RNU7-169P-201ENST00000459456 61 ntBASIC-1.47□□□□□ -2.64
HMGB3O15347 RNU7-13P-201ENST00000516413 62 ntBASIC-1.47□□□□□ -2.64
HMGB3O15347 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.47□□□□□ -2.64
HMGB3O15347 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.47□□□□□ -2.64
HMGB3O15347 U2.1-201ENST00000618978 145 ntBASIC-1.47□□□□□ -2.64
HMGB3O15347 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms