Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL512598.1-201ENST00000610158 273 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 SNORD38B-202ENST00000625943 69 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 AC010332.2-201ENST00000613083 1904 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-580P-201ENST00000365159 107 ntBASIC1.18□□□□□ -2.22
TCRBV7S3A2A0A539 Y_RNA.354-201ENST00000365448 111 ntBASIC1.18□□□□□ -2.22
TCRBV7S3A2A0A539 AC244023.1-201ENST00000426884 112 ntBASIC1.18□□□□□ -2.22
TCRBV7S3A2A0A539 AC108667.1-201ENST00000428618 249 ntBASIC1.18□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-893P-201ENST00000458841 100 ntBASIC1.18□□□□□ -2.22
TCRBV7S3A2A0A539 MIR4264-201ENST00000583520 66 ntBASIC1.18□□□□□ -2.22
TCRBV7S3A2A0A539 AC242498.1-201ENST00000604134 111 ntBASIC1.18□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-508P-201ENST00000363231 103 ntBASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 SNORA20-201ENST00000384662 132 ntBASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 MIR548M-201ENST00000408260 86 ntBASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 RNU7-90P-201ENST00000459216 62 ntBASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 AC015712.3-201ENST00000559380 164 ntBASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 HSPE1P19-201ENST00000603327 295 ntBASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 U7.2-201ENST00000607576 63 ntBASIC1.17□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-654P-201ENST00000364373 107 ntBASIC1.16□□□□□ -2.22
TCRBV7S3A2A0A539 Y_RNA.280-201ENST00000364765 112 ntBASIC1.16□□□□□ -2.22
TCRBV7S3A2A0A539 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
TCRBV7S3A2A0A539 MIR613-201ENST00000385248 95 ntBASIC1.16□□□□□ -2.22
TCRBV7S3A2A0A539 POLR2J4-204ENST00000418424 324 ntBASIC1.16□□□□□ -2.22
TCRBV7S3A2A0A539 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
TCRBV7S3A2A0A539 AP000753.3-201ENST00000604083 169 ntBASIC1.16□□□□□ -2.22
TCRBV7S3A2A0A539 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TCRBV7S3A2A0A539 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 RNU6-774P-201ENST00000363238 107 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 Y_RNA.168-201ENST00000363740 102 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 RNU6-690P-201ENST00000365242 106 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 SNORA40-201ENST00000388090 126 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 RNA5SP144-201ENST00000410846 116 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 MTND4LP9-201ENST00000427694 174 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 AC002429.1-201ENST00000437672 148 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 snoU13.23-201ENST00000458863 104 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 Y_RNA.757-201ENST00000578934 114 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 TUG1_4.1-201ENST00000619464 181 ntBASIC1.15□□□□□ -2.23
TCRBV7S3A2A0A539 SNORA22.1-201ENST00000362701 134 ntBASIC1.14□□□□□ -2.23
TCRBV7S3A2A0A539 RNA5SP99-201ENST00000364020 114 ntBASIC1.14□□□□□ -2.23
TCRBV7S3A2A0A539 RNU6-257P-201ENST00000410238 98 ntBASIC1.14□□□□□ -2.23
TCRBV7S3A2A0A539 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
TCRBV7S3A2A0A539 AC063976.4-201ENST00000421971 163 ntBASIC1.14□□□□□ -2.23
TCRBV7S3A2A0A539 RNA5SP272-201ENST00000516095 111 ntBASIC1.14□□□□□ -2.23
TCRBV7S3A2A0A539 AC036111.3-201ENST00000526389 112 ntBASIC1.14□□□□□ -2.23
TCRBV7S3A2A0A539 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
TCRBV7S3A2A0A539 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.14□□□□□ -2.23
TCRBV7S3A2A0A539 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
TCRBV7S3A2A0A539 AC008163.1-202ENST00000636004 2889 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 RNU1-124P-201ENST00000363861 145 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 RNU6-704P-201ENST00000364162 103 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 SNORD113.3-201ENST00000364630 78 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 RNU4-16P-201ENST00000364737 141 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 Y_RNA.330-201ENST00000365230 109 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 MIR222-201ENST00000384992 110 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 Y_RNA.586-201ENST00000391146 98 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 AP1B1P2-201ENST00000416196 106 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 BTF3P4-201ENST00000418852 495 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 SUMO1P3-201ENST00000439961 304 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 RPS23P4-201ENST00000487908 423 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 AC108210.2-201ENST00000503681 201 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 RNU6-240P-201ENST00000516098 97 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 AC133485.4-201ENST00000561835 220 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 AC138907.4-201ENST00000570107 226 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 MIR4305-201ENST00000583252 102 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 AC106800.4-201ENST00000614905 153 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.13□□□□□ -2.23
TCRBV7S3A2A0A539 SNORD115-2-201ENST00000362842 82 ntBASIC1.12□□□□□ -2.23
TCRBV7S3A2A0A539 SNORD115-20-201ENST00000365099 82 ntBASIC1.12□□□□□ -2.23
TCRBV7S3A2A0A539 RNU6-187P-201ENST00000384139 106 ntBASIC1.12□□□□□ -2.23
TCRBV7S3A2A0A539 AL603908.1-201ENST00000406098 201 ntBASIC1.12□□□□□ -2.23
TCRBV7S3A2A0A539 SNORD111-201ENST00000408139 94 ntBASIC1.12□□□□□ -2.23
TCRBV7S3A2A0A539 snoU13.2-201ENST00000459201 104 ntBASIC1.12□□□□□ -2.23
TCRBV7S3A2A0A539 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
TCRBV7S3A2A0A539 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.12□□□□□ -2.23
TCRBV7S3A2A0A539 AL353997.5-201ENST00000618886 171 ntBASIC1.12□□□□□ -2.23
TCRBV7S3A2A0A539 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
TCRBV7S3A2A0A539 Y_RNA.114-201ENST00000363265 113 ntBASIC1.11□□□□□ -2.23
TCRBV7S3A2A0A539 RNU6-647P-201ENST00000364243 107 ntBASIC1.11□□□□□ -2.23
TCRBV7S3A2A0A539 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
TCRBV7S3A2A0A539 MIR150-201ENST00000385048 84 ntBASIC1.11□□□□□ -2.23
TCRBV7S3A2A0A539 MIR563-201ENST00000385080 79 ntBASIC1.11□□□□□ -2.23
TCRBV7S3A2A0A539 AC108081.1-201ENST00000604358 221 ntBASIC1.11□□□□□ -2.23
TCRBV7S3A2A0A539 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TCRBV7S3A2A0A539 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 Y_RNA.366-201ENST00000365540 102 ntBASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 SNORD12C-201ENST00000386307 89 ntBASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 RNA5SP95-201ENST00000410319 137 ntBASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 AL022718.1-201ENST00000412004 84 ntBASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 AL158147.1-201ENST00000443970 75 ntBASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.1□□□□□ -2.23
TCRBV7S3A2A0A539 RNU6-1258P-201ENST00000516911 111 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms