Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 SNORD115-18-201ENST00000363293 82 ntBASIC2.36□□□□□ -2.03
PCDHA11Q9Y5I1 SNORD115-17-201ENST00000364612 82 ntBASIC2.36□□□□□ -2.03
PCDHA11Q9Y5I1 Y_RNA.370-201ENST00000365589 108 ntBASIC2.36□□□□□ -2.03
PCDHA11Q9Y5I1 SNORA70.7-201ENST00000384159 133 ntBASIC2.36□□□□□ -2.03
PCDHA11Q9Y5I1 MIR136-201ENST00000385207 82 ntBASIC2.36□□□□□ -2.03
PCDHA11Q9Y5I1 RPL23AP63-201ENST00000498752 471 ntBASIC2.36□□□□□ -2.03
PCDHA11Q9Y5I1 AC113410.1-201ENST00000505029 247 ntBASIC2.36□□□□□ -2.03
PCDHA11Q9Y5I1 MIR3618-201ENST00000580330 88 ntBASIC2.36□□□□□ -2.03
PCDHA11Q9Y5I1 MIR4781-201ENST00000585250 76 ntBASIC2.36□□□□□ -2.03
PCDHA11Q9Y5I1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 Y_RNA.93-201ENST00000363066 109 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-1319P-201ENST00000390855 104 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-747P-201ENST00000390928 104 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-241P-201ENST00000391148 104 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-177P-201ENST00000411257 104 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-893P-201ENST00000458841 100 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 RNU7-45P-201ENST00000459460 63 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 AC055731.1-201ENST00000474387 401 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 AC021506.2-201ENST00000612354 169 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 AL513423.1-201ENST00000621695 132 ntBASIC2.35□□□□□ -2.03
PCDHA11Q9Y5I1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-112P-201ENST00000363599 104 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 Y_RNA.220-201ENST00000364244 109 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 RNU4-36P-201ENST00000364294 144 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 Y_RNA.299-201ENST00000364973 94 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 SNORA24-201ENST00000384096 131 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 Y_RNA.507-201ENST00000384500 99 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-296P-201ENST00000384608 107 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 RNU2-7P-201ENST00000410794 178 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 AC011753.1-201ENST00000451001 220 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 RNU7-34P-201ENST00000459394 64 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 RNU7-53P-201ENST00000516705 60 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 DEFB131E-201ENST00000532329 154 ntBASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDHA11Q9Y5I1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 Y_RNA.107-201ENST00000363190 121 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 Y_RNA.171-201ENST00000363760 102 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 MIR660-201ENST00000385235 97 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 AC093850.1-201ENST00000454121 251 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 RPS29P29-201ENST00000456396 171 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 RNU7-113P-201ENST00000459273 62 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 RNU2-13P-201ENST00000515909 113 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 MIR4709-201ENST00000577272 72 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 AC024614.2-201ENST00000577584 372 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 MIR1255B1-201ENST00000636325 63 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 MIR6841-201ENST00000637129 72 ntBASIC2.33□□□□□ -2.04
PCDHA11Q9Y5I1 AC005336.3-201ENST00000623833 2679 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 SNORD115-2-201ENST00000362842 82 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 RNU6-363P-201ENST00000362895 105 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 RNU6-1099P-201ENST00000363533 107 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 SNORD115-20-201ENST00000365099 82 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 AC019129.1-201ENST00000403786 261 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 RNU4-69P-201ENST00000410677 143 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 AC099513.1-201ENST00000490423 301 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 SCARNA23-201ENST00000516060 130 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 RNA5SP481-201ENST00000516814 122 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 RNU6-1258P-201ENST00000516911 111 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 RNU6-762P-201ENST00000517107 102 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 MIR3152-201ENST00000579801 74 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 AL513534.2-201ENST00000603836 250 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 Y_RNA.773-201ENST00000607168 90 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 AL442128.1-201ENST00000615151 90 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 MALAT1.1-201ENST00000618249 95 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHA11Q9Y5I1 SNORA22.1-201ENST00000362701 134 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 RNY3P2-201ENST00000362918 102 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 Y_RNA.466-201ENST00000384294 113 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 RNY1P7-201ENST00000384743 110 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 RNY4P29-201ENST00000410801 97 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 AC108667.1-201ENST00000428618 249 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 RNU7-67P-201ENST00000459003 62 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 snoU13.27-201ENST00000459278 104 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 SNORD123-201ENST00000459473 70 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 RNU6-958P-201ENST00000516995 106 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 RNU6-844P-201ENST00000517175 102 ntBASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
PCDHA11Q9Y5I1 Y_RNA.155-201ENST00000363632 101 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 MIR526A1-201ENST00000384897 85 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 SNORA26.2-201ENST00000390922 122 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 SNORA26.6-201ENST00000391256 115 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 RNA5SP261-201ENST00000410536 106 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 PGBD4P5-201ENST00000445958 426 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 RNU7-73P-201ENST00000458743 63 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 DNAJC19P9-201ENST00000555084 351 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 MIR4694-201ENST00000578534 80 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 FAM71BP1-201ENST00000604431 523 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 snoU13.31-201ENST00000607291 104 ntBASIC2.3□□□□□ -2.04
PCDHA11Q9Y5I1 WWP1P1-201ENST00000466609 2769 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms