Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 SNORA31.11-201ENST00000516528 139 ntBASIC2.53□□□□□ -2
SALL4Q9UJQ4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.53□□□□□ -2
SALL4Q9UJQ4 SNORD53-201ENST00000579969 78 ntBASIC2.53□□□□□ -2
SALL4Q9UJQ4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.53□□□□□ -2
SALL4Q9UJQ4 SNORA1.1-201ENST00000364671 133 ntBASIC2.52□□□□□ -2.01
SALL4Q9UJQ4 SNORA70B-201ENST00000384210 135 ntBASIC2.52□□□□□ -2.01
SALL4Q9UJQ4 AC008413.1-201ENST00000511864 177 ntBASIC2.52□□□□□ -2.01
SALL4Q9UJQ4 RNA5SP24-201ENST00000516478 95 ntBASIC2.52□□□□□ -2.01
SALL4Q9UJQ4 RNU6-1018P-201ENST00000516577 106 ntBASIC2.52□□□□□ -2.01
SALL4Q9UJQ4 AC016717.2-201ENST00000609089 5141 ntBASIC2.52□□□□□ -2.01
SALL4Q9UJQ4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 RNU6-1134P-201ENST00000365156 101 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 Y_RNA.354-201ENST00000365448 111 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 Y_RNA.388-201ENST00000383919 113 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 RNU6-679P-201ENST00000391003 106 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 AL359511.1-201ENST00000402970 211 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 RNA5SP450-201ENST00000411206 102 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 RNU7-43P-201ENST00000516554 64 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 RNU6-521P-201ENST00000516663 105 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 SNORA31.25-201ENST00000517242 134 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 AL512310.12-203ENST00000640543 90 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
SALL4Q9UJQ4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 RNU6-170P-201ENST00000362832 104 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 Y_RNA.96-201ENST00000363092 109 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 SNORA32-201ENST00000384072 121 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 RNU1-52P-201ENST00000384190 164 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 MIR450A2-201ENST00000385022 100 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 AL023284.1-201ENST00000403956 276 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 RNU1-41P-201ENST00000516161 162 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 RNU6-795P-201ENST00000516323 103 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 RNU1-48P-201ENST00000516400 162 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 SNORA31.17-201ENST00000516953 127 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 AC026421.1-201ENST00000519101 163 ntBASIC2.5□□□□□ -2.01
SALL4Q9UJQ4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 SNORD45B-201ENST00000364617 72 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 MIR1261-201ENST00000408659 82 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 AC096949.1-201ENST00000412047 152 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 AC004941.2-201ENST00000427009 228 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 RNA5SP57-201ENST00000459463 123 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 AC096720.1-201ENST00000604441 183 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 AC046143.2-201ENST00000609789 160 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 MIR8055-201ENST00000610739 97 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 AC012531.4-201ENST00000616509 177 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 MIR1291-201ENST00000627649 87 ntBASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.49□□□□□ -2.01
SALL4Q9UJQ4 SNORA3A-201ENST00000364113 130 ntBASIC2.48□□□□□ -2.01
SALL4Q9UJQ4 Y_RNA.377-201ENST00000365644 108 ntBASIC2.48□□□□□ -2.01
SALL4Q9UJQ4 RNU6-820P-201ENST00000384273 107 ntBASIC2.48□□□□□ -2.01
SALL4Q9UJQ4 HMGN1P33-201ENST00000432945 451 ntBASIC2.48□□□□□ -2.01
SALL4Q9UJQ4 RNU7-61P-201ENST00000515897 61 ntBASIC2.48□□□□□ -2.01
SALL4Q9UJQ4 MIR4764-201ENST00000580680 88 ntBASIC2.48□□□□□ -2.01
SALL4Q9UJQ4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.48□□□□□ -2.01
SALL4Q9UJQ4 MIR520C-201ENST00000385005 87 ntBASIC2.47□□□□□ -2.01
SALL4Q9UJQ4 RNU6-644P-201ENST00000391155 98 ntBASIC2.47□□□□□ -2.01
SALL4Q9UJQ4 AC245047.7-201ENST00000440265 293 ntBASIC2.47□□□□□ -2.01
SALL4Q9UJQ4 Y_RNA.659-201ENST00000515994 113 ntBASIC2.47□□□□□ -2.01
SALL4Q9UJQ4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.47□□□□□ -2.01
SALL4Q9UJQ4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.47□□□□□ -2.01
SALL4Q9UJQ4 AC062037.1-201ENST00000605302 128 ntBASIC2.47□□□□□ -2.01
SALL4Q9UJQ4 MIR6715A-201ENST00000615929 79 ntBASIC2.47□□□□□ -2.01
SALL4Q9UJQ4 ZNF658B-202ENST00000615961 3375 ntBASIC2.46□□□□□ -2.02
SALL4Q9UJQ4 RNU6-1201P-201ENST00000384227 107 ntBASIC2.46□□□□□ -2.02
SALL4Q9UJQ4 MRPL35P3-201ENST00000421557 364 ntBASIC2.46□□□□□ -2.02
SALL4Q9UJQ4 AL353813.1-201ENST00000440700 253 ntBASIC2.46□□□□□ -2.02
SALL4Q9UJQ4 MIR1270-201ENST00000459320 83 ntBASIC2.46□□□□□ -2.02
SALL4Q9UJQ4 RNU6-322P-201ENST00000516010 103 ntBASIC2.46□□□□□ -2.02
SALL4Q9UJQ4 RNU7-193P-201ENST00000516723 65 ntBASIC2.46□□□□□ -2.02
SALL4Q9UJQ4 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.46□□□□□ -2.02
SALL4Q9UJQ4 AC008133.2-201ENST00000624540 351 ntBASIC2.46□□□□□ -2.02
SALL4Q9UJQ4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SALL4Q9UJQ4 RNU6-60P-201ENST00000364792 103 ntBASIC2.45□□□□□ -2.02
SALL4Q9UJQ4 Y_RNA.290-201ENST00000364879 114 ntBASIC2.45□□□□□ -2.02
SALL4Q9UJQ4 RNU4-53P-201ENST00000410828 140 ntBASIC2.45□□□□□ -2.02
SALL4Q9UJQ4 AC104435.1-201ENST00000483483 166 ntBASIC2.45□□□□□ -2.02
SALL4Q9UJQ4 AC234781.5-201ENST00000508429 271 ntBASIC2.45□□□□□ -2.02
SALL4Q9UJQ4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.45□□□□□ -2.02
SALL4Q9UJQ4 DEFB122-202ENST00000569013 197 ntBASIC2.45□□□□□ -2.02
SALL4Q9UJQ4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.45□□□□□ -2.02
SALL4Q9UJQ4 AC245884.12-201ENST00000615364 59 ntBASIC2.45□□□□□ -2.02
SALL4Q9UJQ4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SALL4Q9UJQ4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
SALL4Q9UJQ4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SALL4Q9UJQ4 U8.2-201ENST00000363156 134 ntBASIC2.44□□□□□ -2.02
SALL4Q9UJQ4 SNORD115-35-201ENST00000365122 82 ntBASIC2.44□□□□□ -2.02
SALL4Q9UJQ4 SNORA3.2-201ENST00000408221 125 ntBASIC2.44□□□□□ -2.02
SALL4Q9UJQ4 RN7SKP12-201ENST00000516275 143 ntBASIC2.44□□□□□ -2.02
SALL4Q9UJQ4 RNU6-917P-201ENST00000516294 104 ntBASIC2.44□□□□□ -2.02
SALL4Q9UJQ4 U7.3-201ENST00000616123 62 ntBASIC2.44□□□□□ -2.02
SALL4Q9UJQ4 Z97988.1-201ENST00000637697 135 ntBASIC2.44□□□□□ -2.02
SALL4Q9UJQ4 RNA5SP289-201ENST00000362332 137 ntBASIC2.43□□□□□ -2.02
SALL4Q9UJQ4 RNU6-1313P-201ENST00000362622 102 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 319.8 ms