Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNU6-169P-201ENST00000365336 107 ntBASIC-2.13□□□□□ -2.75
SCN11AQ9UI33 Y_RNA.351-201ENST00000365436 96 ntBASIC-2.13□□□□□ -2.75
SCN11AQ9UI33 Y_RNA.366-201ENST00000365540 102 ntBASIC-2.13□□□□□ -2.75
SCN11AQ9UI33 MIR1-2-201ENST00000384961 85 ntBASIC-2.13□□□□□ -2.75
SCN11AQ9UI33 AC116353.3-201ENST00000511215 249 ntBASIC-2.13□□□□□ -2.75
SCN11AQ9UI33 Y_RNA.97-201ENST00000363094 102 ntBASIC-2.14□□□□□ -2.75
SCN11AQ9UI33 RNU6-224P-201ENST00000384055 107 ntBASIC-2.14□□□□□ -2.75
SCN11AQ9UI33 MIR496-201ENST00000385226 102 ntBASIC-2.14□□□□□ -2.75
SCN11AQ9UI33 RNU6-710P-201ENST00000410424 105 ntBASIC-2.14□□□□□ -2.75
SCN11AQ9UI33 RNU2-51P-201ENST00000410708 197 ntBASIC-2.14□□□□□ -2.75
SCN11AQ9UI33 RNU6-412P-201ENST00000516434 106 ntBASIC-2.14□□□□□ -2.75
SCN11AQ9UI33 MIR4703-201ENST00000577728 79 ntBASIC-2.14□□□□□ -2.75
SCN11AQ9UI33 MIR342-201ENST00000362212 99 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 RNU6-228P-201ENST00000362700 106 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 Y_RNA.358-201ENST00000365491 99 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 RNU6-1114P-201ENST00000516022 107 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 RNU7-115P-201ENST00000516433 55 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 AP001542.1-201ENST00000591314 200 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 RNU6-208P-201ENST00000362431 107 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 AL031003.1-201ENST00000404229 172 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 MTCYBP8-201ENST00000422855 651 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 MTND3P7-201ENST00000474435 343 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 RNU6-436P-201ENST00000516171 114 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 DLEU2_5.2-201ENST00000610606 84 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 MIR548AY-201ENST00000617669 107 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 AC006386.1-201ENST00000619436 415 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 AC009878.1-201ENST00000621819 340 ntBASIC-2.15□□□□□ -2.75
SCN11AQ9UI33 Y_RNA.14-201ENST00000362415 103 ntBASIC-2.16□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.16□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.16□□□□□ -2.76
SCN11AQ9UI33 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.16□□□□□ -2.76
SCN11AQ9UI33 RNU6-625P-201ENST00000459412 107 ntBASIC-2.16□□□□□ -2.76
SCN11AQ9UI33 RNU6-1208P-201ENST00000459588 107 ntBASIC-2.16□□□□□ -2.76
SCN11AQ9UI33 AC122108.2-201ENST00000611946 526 ntBASIC-2.16□□□□□ -2.76
SCN11AQ9UI33 AC007494.3-201ENST00000624660 743 ntBASIC-2.16□□□□□ -2.76
SCN11AQ9UI33 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.16□□□□□ -2.76
SCN11AQ9UI33 SNORD114-10-201ENST00000363409 72 ntBASIC-2.17□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.215-201ENST00000364204 112 ntBASIC-2.17□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.456-201ENST00000384232 111 ntBASIC-2.17□□□□□ -2.76
SCN11AQ9UI33 MIR548E-201ENST00000408287 88 ntBASIC-2.17□□□□□ -2.76
SCN11AQ9UI33 MTND3P23-201ENST00000431980 347 ntBASIC-2.17□□□□□ -2.76
SCN11AQ9UI33 AC016550.1-201ENST00000505348 785 ntBASIC-2.17□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.809-201ENST00000516058 95 ntBASIC-2.17□□□□□ -2.76
SCN11AQ9UI33 RNU7-149P-201ENST00000516739 59 ntBASIC-2.17□□□□□ -2.76
SCN11AQ9UI33 EIF1P2-201ENST00000428233 350 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 MTCO2P30-201ENST00000503662 364 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 RNY4-201ENST00000516507 96 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 MIR4490-201ENST00000582647 84 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 AC008536.2-201ENST00000607284 349 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 AC004467.1-201ENST00000615678 330 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.436-201ENST00000384097 102 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 RNU6-746P-201ENST00000384112 109 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 RNU6-214P-201ENST00000384130 107 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 RNU7-195P-201ENST00000458793 62 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 AC098479.1-201ENST00000609225 154 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 MIR664B-201ENST00000626756 61 ntBASIC-2.18□□□□□ -2.76
SCN11AQ9UI33 RNU6-501P-201ENST00000364072 100 ntBASIC-2.19□□□□□ -2.76
SCN11AQ9UI33 RNU6-1163P-201ENST00000364516 107 ntBASIC-2.19□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.310-201ENST00000365063 113 ntBASIC-2.19□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.341-201ENST00000365341 102 ntBASIC-2.19□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.578-201ENST00000390903 88 ntBASIC-2.19□□□□□ -2.76
SCN11AQ9UI33 AF228730.4-201ENST00000421457 183 ntBASIC-2.19□□□□□ -2.76
SCN11AQ9UI33 UBE2V1P7-201ENST00000446395 340 ntBASIC-2.19□□□□□ -2.76
SCN11AQ9UI33 SCARNA24.1-201ENST00000516465 137 ntBASIC-2.19□□□□□ -2.76
SCN11AQ9UI33 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-2.19□□□□□ -2.76
SCN11AQ9UI33 RNU6-82P-201ENST00000363970 107 ntBASIC-2.2□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.2□□□□□ -2.76
SCN11AQ9UI33 RNY4P28-201ENST00000365281 93 ntBASIC-2.2□□□□□ -2.76
SCN11AQ9UI33 RNU6-74P-201ENST00000384235 107 ntBASIC-2.2□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.608-201ENST00000410647 95 ntBASIC-2.2□□□□□ -2.76
SCN11AQ9UI33 AC108019.1-201ENST00000512540 175 ntBASIC-2.2□□□□□ -2.76
SCN11AQ9UI33 MIR6874-201ENST00000635894 71 ntBASIC-2.2□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.367-201ENST00000365544 101 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 SNORD75.2-201ENST00000408784 58 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.596-201ENST00000410462 109 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 AC018880.2-201ENST00000414265 201 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 ELOCP20-201ENST00000422460 345 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 GPR143P-201ENST00000434155 205 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 USP9YP23-201ENST00000455085 407 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 RNU7-80P-201ENST00000459562 61 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 RNU6-79P-201ENST00000362511 107 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 RNU6-524P-201ENST00000384270 107 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 RNU6-903P-201ENST00000391270 109 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 SNORD63B-201ENST00000411005 70 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 SNORD27.1-201ENST00000516319 72 ntBASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-2.21□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.22□□□□□ -2.76
SCN11AQ9UI33 SNORA20-201ENST00000384662 132 ntBASIC-2.22□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.653-201ENST00000459091 95 ntBASIC-2.22□□□□□ -2.76
SCN11AQ9UI33 Y_RNA.631-201ENST00000459607 101 ntBASIC-2.22□□□□□ -2.76
SCN11AQ9UI33 RNA5SP272-201ENST00000516095 111 ntBASIC-2.22□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms